More than 300 homologs were found in PanDaTox collection
for query gene Dshi_1750 on replicon NC_009952
Organism: Dinoroseobacter shibae DFL 12



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009952  Dshi_1750  acyl-CoA dehydrogenase  100 
 
 
381 aa  774    Dinoroseobacter shibae DFL 12  Bacteria  normal  normal  0.317107 
 
 
-
 
NC_008044  TM1040_1103  acyl-CoA dehydrogenase-like  79.63 
 
 
381 aa  632  1e-180  Ruegeria sp. TM1040  Bacteria  normal  normal 
 
 
-
 
NC_007802  Jann_1909  butyryl-CoA dehydrogenase  82.89 
 
 
381 aa  625  1e-178  Jannaschia sp. CCS1  Bacteria  normal  normal 
 
 
-
 
NC_009428  Rsph17025_1335  acyl-CoA dehydrogenase domain-containing protein  75.2 
 
 
379 aa  593  1e-168  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.254429  normal  0.854455 
 
 
-
 
NC_009049  Rsph17029_1789  acyl-CoA dehydrogenase domain-containing protein  75.73 
 
 
379 aa  590  1e-167  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.0858072  normal 
 
 
-
 
NC_007493  RSP_0156  Acyl-CoA dehydrogenase  75.2 
 
 
379 aa  587  1e-166  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_011370  Rleg2_6081  acyl-CoA dehydrogenase domain protein  70 
 
 
381 aa  568  1e-161  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.517442  normal 
 
 
-
 
NC_008687  Pden_4480  acyl-CoA dehydrogenase domain-containing protein  73.68 
 
 
381 aa  568  1e-161  Paracoccus denitrificans PD1222  Bacteria  normal  0.155011  normal 
 
 
-
 
NC_010505  Mrad2831_3784  acyl-CoA dehydrogenase domain-containing protein  65.09 
 
 
381 aa  499  1e-140  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.0514629  normal  0.596674 
 
 
-
 
NC_011004  Rpal_3937  acyl-CoA dehydrogenase domain protein  63.85 
 
 
385 aa  491  9.999999999999999e-139  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.818683  n/a   
 
 
-
 
NC_009667  Oant_1871  acyl-CoA dehydrogenase domain-containing protein  62.67 
 
 
385 aa  483  1e-135  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_011894  Mnod_2176  acyl-CoA dehydrogenase domain protein  64 
 
 
380 aa  483  1e-135  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.110006  n/a   
 
 
-
 
NC_009620  Smed_4241  acyl-CoA dehydrogenase domain-containing protein  62.77 
 
 
382 aa  481  1e-134  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_009720  Xaut_2190  acyl-CoA dehydrogenase domain-containing protein  63.03 
 
 
380 aa  479  1e-134  Xanthobacter autotrophicus Py2  Bacteria  normal  normal  0.565732 
 
 
-
 
NC_010511  M446_2476  acyl-CoA dehydrogenase domain-containing protein  63.47 
 
 
380 aa  475  1e-133  Methylobacterium sp. 4-46  Bacteria  normal  0.893721  normal  0.185436 
 
 
-
 
NC_007958  RPD_3301  acyl-CoA dehydrogenase-like  60.63 
 
 
381 aa  476  1e-133  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal  0.168826 
 
 
-
 
NC_007964  Nham_2558  acyl-CoA dehydrogenase-like  60.89 
 
 
381 aa  476  1e-133  Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_3579  acyl-CoA dehydrogenase  60.63 
 
 
381 aa  474  1e-132  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.740274 
 
 
-
 
NC_007778  RPB_2120  Acyl-CoA dehydrogenase-like  60.42 
 
 
382 aa  469  1.0000000000000001e-131  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.270517  normal  0.533217 
 
 
-
 
NC_007643  Rru_A1835  butyryl-CoA dehydrogenase  60.58 
 
 
379 aa  466  9.999999999999999e-131  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.571593  n/a   
 
 
-
 
NC_009505  BOV_1275  acyl-CoA dehydrogenase  61.33 
 
 
385 aa  463  1e-129  Brucella ovis ATCC 25840  Bacteria  normal  n/a   
 
 
-
 
NC_007925  RPC_3093  acyl-CoA dehydrogenase-like  59.63 
 
 
382 aa  464  1e-129  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.224598 
 
 
-
 
NC_010338  Caul_3055  acyl-CoA dehydrogenase domain-containing protein  58.89 
 
 
379 aa  461  9.999999999999999e-129  Caulobacter sp. K31  Bacteria  normal  0.350853  normal 
 
 
-
 
NC_009484  Acry_0623  acyl-CoA dehydrogenase domain-containing protein  62.13 
 
 
391 aa  459  9.999999999999999e-129  Acidiphilium cryptum JF-5  Bacteria  normal  n/a   
 
 
-
 
NC_008254  Meso_0589  acyl-CoA dehydrogenase-like  60 
 
 
380 aa  458  9.999999999999999e-129  Chelativorans sp. BNC1  Bacteria  normal  0.371996  n/a   
 
 
-
 
NC_010581  Bind_0617  acyl-CoA dehydrogenase domain-containing protein  60 
 
 
380 aa  456  1e-127  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  0.432927  normal 
 
 
-
 
NC_009511  Swit_0650  acyl-CoA dehydrogenase domain-containing protein  60 
 
 
381 aa  457  1e-127  Sphingomonas wittichii RW1  Bacteria  normal  0.187966  normal 
 
 
-
 
NC_009719  Plav_2898  acyl-CoA dehydrogenase domain-containing protein  58.09 
 
 
379 aa  453  1.0000000000000001e-126  Parvibaculum lavamentivorans DS-1  Bacteria  normal  hitchhiker  0.000249127 
 
 
-
 
NC_008347  Mmar10_1546  acyl-CoA dehydrogenase domain-containing protein  57.03 
 
 
378 aa  448  1e-125  Maricaulis maris MCS10  Bacteria  normal  0.295515  normal 
 
 
-
 
NC_007406  Nwi_2158  acyl-CoA dehydrogenase  59.32 
 
 
381 aa  446  1.0000000000000001e-124  Nitrobacter winogradskyi Nb-255  Bacteria  normal  normal  0.337808 
 
 
-
 
NC_007794  Saro_0858  butyryl-CoA dehydrogenase  56.27 
 
 
380 aa  434  1e-120  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.661231  n/a   
 
 
-
 
NC_012803  Mlut_02820  acyl-CoA dehydrogenase  55.73 
 
 
377 aa  429  1e-119  Micrococcus luteus NCTC 2665  Bacteria  normal  0.986779  n/a   
 
 
-
 
NC_008048  Sala_3053  Acyl-CoA dehydrogenase  55.2 
 
 
381 aa  430  1e-119  Sphingopyxis alaskensis RB2256  Bacteria  normal  normal  0.75901 
 
 
-
 
NC_010506  Swoo_3200  acyl-CoA dehydrogenase domain-containing protein  54.91 
 
 
385 aa  424  1e-117  Shewanella woodyi ATCC 51908  Bacteria  normal  0.393512  hitchhiker  0.00650034 
 
 
-
 
NC_009901  Spea_2781  acyl-CoA dehydrogenase domain-containing protein  53.58 
 
 
385 aa  423  1e-117  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_013457  VEA_001547  branched-chain acyl-CoA dehydrogenase  54.76 
 
 
384 aa  423  1e-117  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_008228  Patl_0949  acyl-CoA dehydrogenase-like  53.97 
 
 
385 aa  423  1e-117  Pseudoalteromonas atlantica T6c  Bacteria  normal  0.0416018  n/a   
 
 
-
 
NC_009784  VIBHAR_05484  acyl-CoA dehydrogenase  55.82 
 
 
384 aa  422  1e-117  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_009831  Ssed_1475  butyryl-CoA dehydrogenase  53.85 
 
 
385 aa  419  1e-116  Shewanella sediminis HAW-EB3  Bacteria  normal  hitchhiker  0.00937307 
 
 
-
 
NC_008577  Shewana3_2769  acyl-CoA dehydrogenase domain-containing protein  53.32 
 
 
385 aa  417  9.999999999999999e-116  Shewanella sp. ANA-3  Bacteria  normal  normal  0.329604 
 
 
-
 
NC_009665  Shew185_1491  acyl-CoA dehydrogenase domain-containing protein  52.25 
 
 
385 aa  412  1e-114  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_2854  acyl-CoA dehydrogenase domain protein  52.25 
 
 
385 aa  412  1e-114  Shewanella baltica OS223  Bacteria  normal  0.715109  hitchhiker  0.0000000460252 
 
 
-
 
NC_009052  Sbal_1497  acyl-CoA dehydrogenase domain-containing protein  52.25 
 
 
385 aa  412  1e-114  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_009438  Sputcn32_1399  acyl-CoA dehydrogenase domain-containing protein  52.52 
 
 
385 aa  414  1e-114  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_011138  MADE_01905  Acyl-CoA dehydrogenase family protein  53.02 
 
 
397 aa  414  1e-114  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  0.271746  n/a   
 
 
-
 
NC_009092  Shew_1669  butyryl-CoA dehydrogenase  53.32 
 
 
385 aa  413  1e-114  Shewanella loihica PV-4  Bacteria  normal  0.260436  hitchhiker  0.00156032 
 
 
-
 
NC_008321  Shewmr4_2595  acyl-CoA dehydrogenase domain-containing protein  52.79 
 
 
385 aa  413  1e-114  Shewanella sp. MR-4  Bacteria  normal  hitchhiker  0.000133331 
 
 
-
 
NC_008322  Shewmr7_2662  acyl-CoA dehydrogenase domain-containing protein  52.79 
 
 
385 aa  414  1e-114  Shewanella sp. MR-7  Bacteria  normal  0.553599  normal 
 
 
-
 
NC_008345  Sfri_1340  butyryl-CoA dehydrogenase  53.03 
 
 
385 aa  414  1e-114  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.92296  n/a   
 
 
-
 
NC_009997  Sbal195_1527  acyl-CoA dehydrogenase domain-containing protein  52.25 
 
 
385 aa  412  1e-114  Shewanella baltica OS195  Bacteria  normal  normal 
 
 
-
 
NC_010717  PXO_01704  acyl-CoA dehydrogenase family member 8  56.3 
 
 
393 aa  409  1e-113  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.791292  n/a   
 
 
-
 
NC_008740  Maqu_2132  butyryl-CoA dehydrogenase  55.41 
 
 
388 aa  411  1e-113  Marinobacter aquaeolei VT8  Bacteria  normal  0.627987  n/a   
 
 
-
 
NC_011992  Dtpsy_1811  acyl-CoA dehydrogenase domain protein  53.83 
 
 
388 aa  407  1.0000000000000001e-112  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_004347  SO_1679  acyl-CoA dehydrogenase family protein  51.99 
 
 
385 aa  406  1.0000000000000001e-112  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_008700  Sama_1377  butyryl-CoA dehydrogenase  52.25 
 
 
385 aa  407  1.0000000000000001e-112  Shewanella amazonensis SB2B  Bacteria  normal  normal  0.0267981 
 
 
-
 
NC_008782  Ajs_2007  acyl-CoA dehydrogenase domain-containing protein  53.83 
 
 
388 aa  408  1.0000000000000001e-112  Acidovorax sp. JS42  Bacteria  normal  0.510402  normal  0.124271 
 
 
-
 
NC_008752  Aave_2602  acyl-CoA dehydrogenase domain-containing protein  54.09 
 
 
388 aa  405  1.0000000000000001e-112  Acidovorax citrulli AAC00-1  Bacteria  hitchhiker  0.000586554  normal  0.488782 
 
 
-
 
NC_012791  Vapar_3255  acyl-CoA dehydrogenase domain protein  55.7 
 
 
384 aa  406  1.0000000000000001e-112  Variovorax paradoxus S110  Bacteria  normal  0.616941  n/a   
 
 
-
 
NC_010002  Daci_3693  acyl-CoA dehydrogenase domain-containing protein  53.83 
 
 
388 aa  404  1e-111  Delftia acidovorans SPH-1  Bacteria  normal  0.625354  normal  0.0697869 
 
 
-
 
NC_006369  lpl0900  hypothetical protein  50.66 
 
 
384 aa  402  1e-111  Legionella pneumophila str. Lens  Bacteria  n/a    n/a   
 
 
-
 
NC_007954  Sden_1941  butyryl-CoA dehydrogenase  51.85 
 
 
385 aa  402  1e-111  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_009338  Mflv_5011  acyl-CoA dehydrogenase domain-containing protein  55.11 
 
 
387 aa  403  1e-111  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.117513  normal  0.214057 
 
 
-
 
NC_006368  lpp0931  hypothetical protein  50.66 
 
 
384 aa  400  9.999999999999999e-111  Legionella pneumophila str. Paris  Bacteria  n/a    n/a   
 
 
-
 
NC_008705  Mkms_1079  acyl-CoA dehydrogenase domain-containing protein  53.49 
 
 
388 aa  401  9.999999999999999e-111  Mycobacterium sp. KMS  Bacteria  normal  normal  0.0773066 
 
 
-
 
NC_008146  Mmcs_1063  acyl-CoA dehydrogenase-like protein  53.49 
 
 
388 aa  401  9.999999999999999e-111  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_009077  Mjls_1090  acyl-CoA dehydrogenase domain-containing protein  53.23 
 
 
388 aa  399  9.999999999999999e-111  Mycobacterium sp. JLS  Bacteria  normal  0.992341  normal 
 
 
-
 
NC_003910  CPS_0658  acyl-CoA dehydrogenase  50.92 
 
 
388 aa  395  1e-109  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_008726  Mvan_1361  acyl-CoA dehydrogenase domain-containing protein  53.23 
 
 
387 aa  395  1e-109  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.237176  normal 
 
 
-
 
NC_013441  Gbro_3901  acyl-CoA dehydrogenase domain protein  55.23 
 
 
392 aa  396  1e-109  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_009656  PSPA7_4774  acyl-CoA dehydrogenase  55.17 
 
 
387 aa  394  1e-108  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_014158  Tpau_3069  acyl-CoA dehydrogenase domain protein  53.48 
 
 
387 aa  392  1e-108  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.117634  n/a   
 
 
-
 
NC_013457  VEA_000373  branched-chain acyl-CoA dehydrogenase  49.87 
 
 
384 aa  392  1e-108  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_54630  acyl-CoA dehydrogenase  54.91 
 
 
387 aa  394  1e-108  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  hitchhiker  0.00169112 
 
 
-
 
NC_011071  Smal_0220  acyl-CoA dehydrogenase domain protein  54.91 
 
 
388 aa  389  1e-107  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.581384  normal 
 
 
-
 
NC_009524  PsycPRwf_0300  acyl-CoA dehydrogenase domain-containing protein  48.95 
 
 
388 aa  386  1e-106  Psychrobacter sp. PRwf-1  Bacteria  normal  normal 
 
 
-
 
NC_007969  Pcryo_1516  butyryl-CoA dehydrogenase  49.87 
 
 
386 aa  386  1e-106  Psychrobacter cryohalolentis K5  Bacteria  normal  normal 
 
 
-
 
NC_009439  Pmen_1375  acyl-CoA dehydrogenase domain-containing protein  53.58 
 
 
387 aa  386  1e-106  Pseudomonas mendocina ymp  Bacteria  normal  0.178062  normal  0.0980928 
 
 
-
 
NC_007204  Psyc_0901  putative acyl-CoA dehydrogenase  49.87 
 
 
386 aa  384  1e-105  Psychrobacter arcticus 273-4  Bacteria  normal  normal 
 
 
-
 
NC_009565  TBFG_10766  acyl-CoA dehydrogenase fadE9  54.74 
 
 
390 aa  384  1e-105  Mycobacterium tuberculosis F11  Bacteria  hitchhiker  0.0000000000000022778  normal 
 
 
-
 
NC_008786  Veis_3538  butyryl-CoA dehydrogenase  54.91 
 
 
386 aa  376  1e-103  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.689512  normal  0.938482 
 
 
-
 
NC_005957  BT9727_5025  butyryl-CoA dehydrogenase (short-chain acyl-CoA dehydrogenase)  44.44 
 
 
379 aa  306  4.0000000000000004e-82  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_5434  acyl-CoA dehydrogenase  43.92 
 
 
379 aa  304  2.0000000000000002e-81  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  0.0000000000000286159 
 
 
-
 
NC_011772  BCG9842_B5488  acyl-CoA dehydrogenase  43.65 
 
 
379 aa  304  2.0000000000000002e-81  Bacillus cereus G9842  Bacteria  normal  0.270181  hitchhiker  1.62736e-22 
 
 
-
 
NC_011725  BCB4264_A5464  acyl-CoA dehydrogenase  43.92 
 
 
379 aa  304  2.0000000000000002e-81  Bacillus cereus B4264  Bacteria  unclonable  0.0000608426  n/a   
 
 
-
 
NC_005945  BAS5190  acyl-CoA dehydrogenase  43.92 
 
 
379 aa  303  3.0000000000000004e-81  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_5586  acyl-CoA dehydrogenase  43.92 
 
 
379 aa  303  3.0000000000000004e-81  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A5519  acyl-CoA dehydrogenase  43.92 
 
 
379 aa  303  4.0000000000000003e-81  Bacillus cereus AH187  Bacteria  normal  0.814074  n/a   
 
 
-
 
NC_003909  BCE_5472  acyl-CoA dehydrogenase  43.92 
 
 
379 aa  302  5.000000000000001e-81  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK5041  acyl-CoA dehydrogenase  43.65 
 
 
379 aa  302  8.000000000000001e-81  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_009674  Bcer98_3862  acyl-CoA dehydrogenase domain-containing protein  44.18 
 
 
379 aa  301  1e-80  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_013171  Apre_1356  acyl-CoA dehydrogenase domain protein  41.91 
 
 
379 aa  301  1e-80  Anaerococcus prevotii DSM 20548  Bacteria  unclonable  0.00000000100384  n/a   
 
 
-
 
NC_010184  BcerKBAB4_5139  acyl-CoA dehydrogenase domain-containing protein  42.86 
 
 
379 aa  295  6e-79  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_012793  GWCH70_3341  acyl-CoA dehydrogenase domain protein  41.8 
 
 
379 aa  291  1e-77  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_010681  Bphyt_0459  acyl-CoA dehydrogenase domain protein  42.71 
 
 
376 aa  291  1e-77  Burkholderia phytofirmans PsJN  Bacteria  normal  normal  0.672922 
 
 
-
 
NC_007951  Bxe_A4257  putative acyl-CoA dehydrogenase  42.44 
 
 
376 aa  290  2e-77  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.217203 
 
 
-
 
NC_013411  GYMC61_3450  acyl-CoA dehydrogenase domain protein  41.8 
 
 
380 aa  290  2e-77  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_013132  Cpin_1288  acyl-CoA dehydrogenase domain protein  40.37 
 
 
379 aa  288  1e-76  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal  0.751821 
 
 
-
 
NC_013216  Dtox_1697  acyl-CoA dehydrogenase domain protein  40.63 
 
 
386 aa  287  2e-76  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  0.0868604  normal 
 
 
-
 
NC_009441  Fjoh_1932  acyl-CoA dehydrogenase domain-containing protein  39.58 
 
 
380 aa  286  2.9999999999999996e-76  Flavobacterium johnsoniae UW101  Bacteria  normal  n/a   
 
 
-
 
NC_011662  Tmz1t_0733  acyl-CoA dehydrogenase domain protein  41.44 
 
 
377 aa  286  2.9999999999999996e-76  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
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