| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_1045 |
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| Symbol | |
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| ID | 8325217 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | - |
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| Start bp | 1159759 |
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| End bp | 1161522 |
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| Gene Length | 1764 bp |
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| Protein Length | 587 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644941589 |
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| Product | acyl-CoA dehydrogenase domain protein |
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| Protein accession | YP_003098847 |
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| Protein GI | 256375187 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.972862 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGCCGCG AGCGCCCCAA GTTACCCACT GGTAACGTGC GGGTCCCGAC GAAGGGAGCC
CCGGTGCTGC TCGACCCCCA CCGCTACGAC GCCGCCCACC TGGACGACGA GAGCCGACGC
CTGCTGCGCG CGGTCGTCGA CTGGTTCGAA CAGCGCGGCA AGCGCAGGCT GATCGCCGAC
GACCAGGCCA AGGTCTGGTA CTCGGAGTTC CTGGAGTTCG CCGCCCGCGA GAAGCTGTTC
GCCACGTTCT GCACCCCCGC CTGCGAGGCG GACGGCAACC CGGACAAGCG CTGGGACACC
GCCCGCAACG CCGCGCTGAG CGAGGTCCTC GGCTTCTACG GCCTCCAGTA CTGGTACGCC
TGGCAGGTCA CCGTGCTCGG CCTCGGCCCG ATCTGGATGA GCGGCAACGC CGTCGCCCGC
AAGCGCGCCG CCGAGCTGCT CGACGACGGC GCGGTGTTCG CGTTCGGCCT GTCCGAGAAG
GAGCACGGCG CGGACGTCTA CTCCACCGAC CTGGTGCTCA CCCCGGACGG CGACGGCGGG
TTCCGCGCGT CGGGGAGCAA GTACTACATC GGCAACGGCA ACGTCGCGGG CATGGTCTCG
GTGTTCGGGC GGCGCGCCGA CCTGGAGGGC CCGGACGCGT ACGCGTTCTT CGCGGCCGAC
TCGCAGCACC CGGCGTTCCA CCTGGTCAAG AACGTGGTGG ACTCGCAGAT GTTCGTCAGC
GAGTTCGAGC TGCGCGACTA CCCGGTGACC GCCGACGACC TGCTGCACAC CGGGCAGGAG
GCGTTCAGCG CCGCGCTGAA CACGGTCAAC GTCGGCAAGT TCAACCTGTG CACCGCCTCG
ATCGGCATCT GCGAGCACGC GTTCCACGAG GCGATCACCC ACGCGCACAA CCGCGTCCTG
TACGGCAAGC CGGTCACCGC CTTCCCGCAC GTGCGGCAGA ACTTCGTGGA CGCCTACGCG
CGCCTGGCCG CGATGAAGCT GTTCTCCGAC CGCGCCGTGG ACTACTTCCG CTCCGCCTCC
CCGGACGACC GCCGCTACCT GCTGTTCAAC CCCATCACCA AGATGAAGGT CACCACCGAG
GGCGAGCGGG TGGTCGACCT GCTGTGGGAC GTGATCGCCG CCAAGGGGTT CGAGAAGGAC
ACGTACTTCT CCATGGCCGC CCGCGACATC CGCGCGCTGC CGAAGCTGGA GGGCACCGTC
CACGTCAACC TGGCGCTGGT GCTGAAGTTC CTGCCGAACT ACCTGTTCTC CCCCGCCGAC
GACTACCCGC CGGTGCCGAC CAGGCACGAC CCGGCGGACG ACGCGTTCTT CTGGGAGCAG
GGCCCGGCGC GCGGGCTGGG CGCGATCCGG TTCGCCGACT GGGAGGAGCC GTACCGGGCC
GCCTCGGACG TGCCGAACGT GGCGCGCTTC CACGAGCGGG CCCGCGCGCT GCGGGAGCTG
CGGGTGCTGG ACGGGCAGCG CGGCGACCTG GACCTCCTGC TCAGCCTCGG CCACCTGTTC
ACGCTGGTGG TGTACGGGCA GCTGGTGCTG GAGCAGGCCG CGCTGACCGG GGTGGACCGG
GACCTGGTCG ACCAGGTCTT CGACGTGCTG GTGCGGGACT TCGCGGCGGG CGCGGTGGCG
CTGCACGGGA AGTCCGCGTC GACGCCGGAG CAGCAGGCGT GGGCGCTGGC GCAGGTGGTG
AAGCCGGTCG TGGACGGCGA GCGGTTCGAC CGGGTGTGGC AGCGGGTCGA GGGGCTGTCG
GGGGCGTACG AGATGCGGCC CTAG
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| Protein sequence | MSRERPKLPT GNVRVPTKGA PVLLDPHRYD AAHLDDESRR LLRAVVDWFE QRGKRRLIAD
DQAKVWYSEF LEFAAREKLF ATFCTPACEA DGNPDKRWDT ARNAALSEVL GFYGLQYWYA
WQVTVLGLGP IWMSGNAVAR KRAAELLDDG AVFAFGLSEK EHGADVYSTD LVLTPDGDGG
FRASGSKYYI GNGNVAGMVS VFGRRADLEG PDAYAFFAAD SQHPAFHLVK NVVDSQMFVS
EFELRDYPVT ADDLLHTGQE AFSAALNTVN VGKFNLCTAS IGICEHAFHE AITHAHNRVL
YGKPVTAFPH VRQNFVDAYA RLAAMKLFSD RAVDYFRSAS PDDRRYLLFN PITKMKVTTE
GERVVDLLWD VIAAKGFEKD TYFSMAARDI RALPKLEGTV HVNLALVLKF LPNYLFSPAD
DYPPVPTRHD PADDAFFWEQ GPARGLGAIR FADWEEPYRA ASDVPNVARF HERARALREL
RVLDGQRGDL DLLLSLGHLF TLVVYGQLVL EQAALTGVDR DLVDQVFDVL VRDFAAGAVA
LHGKSASTPE QQAWALAQVV KPVVDGERFD RVWQRVEGLS GAYEMRP
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