| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_18380 |
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| Symbol | |
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| ID | 8387165 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | + |
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| Start bp | 1910115 |
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| End bp | 1911764 |
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| Gene Length | 1650 bp |
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| Protein Length | 549 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644975906 |
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| Product | acyl-CoA dehydrogenase |
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| Protein accession | YP_003133688 |
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| Protein GI | 257055856 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.355555 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGGCGG AAGCGGTGGG TACGCGCGCA GCGAAGTTGC GCGCCCGACT CGGTGACCTG
TTGGACCCGG ACAACCCGCT CGGCTACGCG TCGGTGCTGG CCGCCGACGA ACGTGCGGAG
ATGTTCGCCG AAGGCGAGCG AAAGCTCGAC GAGTTCGGCT TGGGAGCCGA GTTCGTCCCC
GCCGAGCTGG GGGGTCGGTT ACGCGGGCTG GACGAACTGA TCGACGTGCT CCGTGTGGTC
TACGGGCACG ATCCGTGCCT CGGCGCCGGA TACGGGGTGA GTTCGTTCAT CGCCGCCACC
AACGTGTGGA CGGCGGGTAG TGCCGAACAA CGAGCCGACG TGGCGAGCCT GTTGCTCGAC
AACGGGAAGC TGGCGACCGC CTACAACGAA CTCGCGCACG GCAACGACCT GTCCGCCTGT
GAGGTGGCGG TGACCTCCCA CGGCAACGGC CGGGTCCTGA ACGGTCGGAA GGAGGTCATC
ACCAACGCCG CGCGGGCCGA CGCGTTCGTG GTGTTCGCCA GGACGAGCCA GAAGCCGGGG
AGTCGAAGCC ACACGCCGAT CCTCGTGGAC CCCACGACGG CGCCGCCGGG GACGGTGGTG
ACATTGCCGC GCTACCGCAC CGATGGACTG CGCGGACTGC CGCTGGCCGG AGTGGAGTTC
CGGGACCACC CGGTCCCCGA CGACCGACTG ATCGGAGAAC CCGGACACGG ACTCGAGACG
GCGTTGCGTG CCTTCCAGGT GACCAGGATC GCCCTGAGCG GGATGGCGAC CGGCCTGCTC
GACACGGCGC TGCGGATCAC GCTGCGGCAC GTGTCCCGAC GCGCCCTCTA CGGAGGCGCC
GTGATCAACC TGCCGTTGAT CCGCGCCCAA CTGGCCGCCG CGTACGCCGA CCTGGTGGTG
TGCGAGACGG TCGCGGACGT GGCCGCCCGG GCGGTGCATC TGACACCGGC CGAGGCGAGT
ATCCCCGCGG CCTCGACGAA ATACCTGGTC TCCGGGTTGG TGTCGCGTGC CCTCGGTGGT
CTGGCCGCCG TTCTCGGGGC GTACTCGTAT GTGCGTAACG GCGAGACCGG GATCTTCCAG
AAACTGGTGC GTGACGCGAA ATCCGTCGCC ATCGTGCATG CCTCGCGCGT GGCGTGCCAA
CAGACCATCC TGCCGCAACT CGTACTGCTG GCGCGCCGTA GTTGGCACGG CGAGGCGACG
CCCGTCGAAG AACTGTTCCA CTTCGGCGAG GAGCTTCCGG AACTGCCCTG GGACCGGCTG
TCGGTCAGTG CGAAAGGGAT CGACCGACTG ACCCCGCTGG TGTTGCGTGA GGCCGACCGC
GACCAACCGG ATGTCCGGCT AAGACGAATG GTCACCGACT TCGCGGGCGA GTTGCGGGAA
CTGGCCGGAG AATGCGCGAC CTTGCCCATG GCGCAGCTTC AGCCCACCGC AGGGCCACAC
AGCTACGAGC TGGTCTCTCG GTTCATCAAC GTCACGGCGG GCGCGGCCTG CATCGGGCGT
TGGCGAGACC GGGATCCGGT TTACGTCTCG GCGTTGCTGA GCAGGTTGCC GTTGAGAGGG
AAACGGCGAT GCGCTCCTTT CGACGAGGAG CAGACCGAAC GGCTGATCAC GGACATGCGG
AAACGGTATC CGAATGACCT GCCGAACTGA
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| Protein sequence | MTAEAVGTRA AKLRARLGDL LDPDNPLGYA SVLAADERAE MFAEGERKLD EFGLGAEFVP
AELGGRLRGL DELIDVLRVV YGHDPCLGAG YGVSSFIAAT NVWTAGSAEQ RADVASLLLD
NGKLATAYNE LAHGNDLSAC EVAVTSHGNG RVLNGRKEVI TNAARADAFV VFARTSQKPG
SRSHTPILVD PTTAPPGTVV TLPRYRTDGL RGLPLAGVEF RDHPVPDDRL IGEPGHGLET
ALRAFQVTRI ALSGMATGLL DTALRITLRH VSRRALYGGA VINLPLIRAQ LAAAYADLVV
CETVADVAAR AVHLTPAEAS IPAASTKYLV SGLVSRALGG LAAVLGAYSY VRNGETGIFQ
KLVRDAKSVA IVHASRVACQ QTILPQLVLL ARRSWHGEAT PVEELFHFGE ELPELPWDRL
SVSAKGIDRL TPLVLREADR DQPDVRLRRM VTDFAGELRE LAGECATLPM AQLQPTAGPH
SYELVSRFIN VTAGAACIGR WRDRDPVYVS ALLSRLPLRG KRRCAPFDEE QTERLITDMR
KRYPNDLPN
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