Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cyan8802_0026 |
Symbol | |
ID | 8389329 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cyanothece sp. PCC 8802 |
Kingdom | Bacteria |
Replicon accession | NC_013161 |
Strand | + |
Start bp | 27843 |
End bp | 29654 |
Gene Length | 1812 bp |
Protein Length | 603 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 644978074 |
Product | acyl-CoA dehydrogenase domain protein |
Protein accession | YP_003135833 |
Protein GI | 257057945 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1960] Acyl-CoA dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0227659 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCACCAAC TCAAACAATA TTGGGTTGCT GAGGCACTCG AAAAGGACTT GGGAAACCCA TTTAACCCAG ATAGTACCAT GTCTTTCAAA CGAGTCGTTG AAATCGATGA GAGCGAGGAA TTTCCTCATC AAGAGATCGA ATGGCTCTAC AATTGGAAAC TGCAACATTA CTATGTTCCG GCGGAGTGTG GTGGGGAATT TACCTCATTT GAGGAATTTG TATCTTTTGT TCGTGTCCTA TGTCGTCGAG ATCAAACCAT AGGAATTGCC TTTACAACGC TATTTTGGTC GTTTATTACC TGGATGACAG GAACCCCAGA ACAAAAGCAA AAATTAGCCC ATTACATTAA AAATGAAAAT GGGACGATGT GTTTGGGCTA TTCCGAAAAA GAGCACGGTA GTGATCTGAT TGGGGGAGAA TTAACGGCAA CAAAAGTCCC TGGGGGTTAT CTTCTCAATG GAGAAAAATG GCCAATTAAT CGGGCAACTC TTTCAGGAAT GCCTTATATT TTAGCTAAAA CCGATCCCAA CGGGGGACCA AAATGTTTAA CCCTATTTAC GGTCGATAAA CGAGAATTAA ATCCCGATAA TTATTACAAT TTACCCAAAA TTTTAACCCA CGGTATTCGC GCTTCTGATA TGAGTGGTAT CGGGTTCAAA GATTGTTTCG TGCCTGATTC CATGAGACTA AAAGAAGAAG GCGACGGCTT AGAAATCGCC TTAAAGGGCT TTCAAATTAC CCGAACCCTT TGCGCGTCGT TTTCATTAGG AGCAGCCGAT ACAGCCTTAA GAACTACCTT AAATTTTGCG TTAAATCGTA TTGTTTATGG TAAAACTGTT TTTGATCTTC CTCAACCGCG TAAAACCCTA GTCGATGCCT TTTTAGACAT ACTTATCTGT GACTGTGAAA CCATCAGTTC TGCGCGGGGT TTTCATGTCA TTCCTGAACA ATTTAGTGTT TGGGCTTCTG TGGTTAAATA CTTTGTGACA ACTCAGCTAG AAACCATGAT AAACAATGTT TATGTGGTAC TAGGTTCTCG GTTTTATATG CGCGAAGAAC ACGACTCCGG TATTTTTCAA AAAGTACTAC GCGATAACTC GATTATTAGT ATGTTTGATG GCAGTACCGT TGTTAATTTA CACGCATTAA TTTTACAACT GCGTCAACTC ACAAAAGTCC GTTCTCGTCG CACTCAAAAA ACCATCACAG AAACTCAAGA ACGACTAGAA ATTATCTTTT CGTTAGAAAA ATCCGTCCCT ACTTTTGATC CAACTAAGCT AGAATTATTT GGACGGGGAA TGGATGATCC TTTACAAGGC CTGGAAATTT CTCTACATCA CTTAGAAACG TTACAAGAAA CGGGTGAAGT TAAACAAGAG GTGTTAGAAA AACTTTTGTT TTTGGGCAGT CTTATCTTAG AGGAATTAGA CGCTCACGAT GACCTGATTG CTAATTCTAA ATTTGAATAC GGTCATGAAC AATCACCAGA GTTGTTTGAA ATTGCCCGAA AATACTGTAC ACTCCATGCA GCAGCTTGTT GTCTCCATAC CTGGGTTTAT AATCGAAATA CCCTAGGGGA ATTTTTCGCT CAAGGGGAAT GGTTAGTGCT AAGTTTACAC CGACTATTGC GGACATTGCG TCCCATGCCC TATTTTATTT CTGAGGCATA TATCGAACAT ACTGCTGAAG AATTGCTGAA ACTTTATCAA GAAGATAAAC TGTTTTCTAT CGTCCCTTTT CAACTTGCTC AATCACCCTT AAAAAAAGAG GATATCTCCT ATGCAACTTC AGGACTCCAG CTTCAAGCTT GA
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Protein sequence | MHQLKQYWVA EALEKDLGNP FNPDSTMSFK RVVEIDESEE FPHQEIEWLY NWKLQHYYVP AECGGEFTSF EEFVSFVRVL CRRDQTIGIA FTTLFWSFIT WMTGTPEQKQ KLAHYIKNEN GTMCLGYSEK EHGSDLIGGE LTATKVPGGY LLNGEKWPIN RATLSGMPYI LAKTDPNGGP KCLTLFTVDK RELNPDNYYN LPKILTHGIR ASDMSGIGFK DCFVPDSMRL KEEGDGLEIA LKGFQITRTL CASFSLGAAD TALRTTLNFA LNRIVYGKTV FDLPQPRKTL VDAFLDILIC DCETISSARG FHVIPEQFSV WASVVKYFVT TQLETMINNV YVVLGSRFYM REEHDSGIFQ KVLRDNSIIS MFDGSTVVNL HALILQLRQL TKVRSRRTQK TITETQERLE IIFSLEKSVP TFDPTKLELF GRGMDDPLQG LEISLHHLET LQETGEVKQE VLEKLLFLGS LILEELDAHD DLIANSKFEY GHEQSPELFE IARKYCTLHA AACCLHTWVY NRNTLGEFFA QGEWLVLSLH RLLRTLRPMP YFISEAYIEH TAEELLKLYQ EDKLFSIVPF QLAQSPLKKE DISYATSGLQ LQA
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