Gene Mflv_0398 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMflv_0398 
Symbol 
ID4971474 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium gilvum PYR-GCK 
KingdomBacteria 
Replicon accessionNC_009338 
Strand
Start bp396189 
End bp397928 
Gene Length1740 bp 
Protein Length579 aa 
Translation table11 
GC content67% 
IMG OID640454603 
Productacyl-CoA dehydrogenase domain-containing protein 
Protein accessionYP_001131680 
Protein GI145221002 
COG category[I] Lipid transport and metabolism 
COG ID[COG1960] Acyl-CoA dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.719718 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.601672 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGCCC GCGGACTTCT GCTGAACCCG AACCACTTCG ACCCCGCATG GCTGGACCCC 
GAATCCCGGC GCCTGCTGCG CGCGCTCATC GACTGGTTCG AGCAGCGCGG CAAGGCACGG
CTGCTGCGCG ACGATCTCGA CGGCGTCTGG GTCGCCGACT TCCTGGAGTT CGTCAAGAAG
GAACGGTTGT TCGCGACGTT CCTGACGCCG TCGGAGTTCG CCGAGGGCGA CCCGAACAAG
CGGTGGGACA CTGCCCGCAA CGCCGTGCTG AGCGAGATCC TGGGCTTCTA CGGCCTGTCC
TACTGGTACG CCGAGCAGGT CACCATCCTG GGCCTGGGCC CGATCTGGCA GAGCGACAAC
GTCAAGGCCA GGGAACGCGC GGCGGCGCAG CTCGAGGCCG GTGAGGTGAT GGCGTTCGGA
CTCTCCGAGC GGGCGCACGG CGCCGACATC TACAACACCG ACATGCTGCT CACCCCGGCC
TCGCCGGGAG CTGACGATCC CGTGGTGTTC CGCGCGTCCG GCGAGAAGTA CTACATCGGC
AACGGCAACG TCGCCGGCAT GGTGTCGGTG TTCGGTCGCC GCACCGACGT GGAGGGCGCC
GACGGATACG TGTGGTTCGT CGCCGACAGC CGGCACCCGG ACTACGAGTT GATCGGCAAC
GTCGTGCACG GCCAGATGTT CGTCAGCAAC TTCGCGCTGC GCGACTACCC GGTCTACGAG
GAGGACATCC TCGCCACCGG CCAGGACGCG TTCTCGGCCG CGCTGAACAC CGTCAACGTC
GGCAAATTCA ACCTGTGCAG CGGCTCGATC GGCATGTGTG AGCACGCGTT CTACGAGGCG
ATCACCCACG CCAACAACCG CATCCTGTAC GGGAACCCCG TCACCGACTT CCCCCACGTG
CGGGCCACGT TCGTCGACGC CTACGCCCGG TTGATCGCGA TGAAGCTGTT CAGCGACCGC
GCGATCGACT ACTTCCGCAG CGCGGGCCCG CACGACCGCC GGTATCTGCT GTTCAACCCG
GTGACCAAGT CGAAGGTCAC CTCCGAGGGC GAGAAGGTCG TCACACTGCT GTGGGATGTG
CTGGCCGCCA AGGGTTTCGA GAAGGACACC TACTTCTACC AGGTGACCCG GCTCATCGGC
GCGCTGCCGC GGCTGGAGGG CACGGTCCAC GTCAACGTCG CGCAGATCTT GAAGTTCATG
CCCAACTACA TGTTCAACCC CGCCGAGTAC CCGCCGATCG GCACCCGCGA CGACCCGGCC
GACGACGTCT TCTTCTGGTC CCAGGGGCCG GCCCGCGGCG CGTCGAAGGT GCGGTTCGCG
GACTGGGCGC CGGTCTACGA GCGTCACGCC GGCATCCCGA ACGTCGGCCG CTTCTACGAG
CAGGTGCAGG CGTTCAAGCA GTTGCTGACG GTCTCGGCGC CCGATGCCGA CCAGCAGGCC
GACCTCGACT TCGTCCTCGT CGTCGGGCAC CTGTTCAGCC TCGTGGTCTA CGGCCAGCTG
ATCCTCGAAC AGGCCGAGAT CACCGGACTC GACCGCGACG TGCTGGACCA GATCTTCGAC
GTCGCGGTCC GCGATTTCTC CGCGTACGCC GTGGCGCTGC ACGGCAAACC CAGCTCGACC
GCCGCGCAAC AGGATTGGGC ACTGTCGGCG GTGCGCAAAC CCGAGCCGGA CTCCGGGCGA
TTCGACCGGG TGTGGGAACA GGTGAGGGGC TACGACGGCG TCTACACGAT GCGCCCCTGA
 
Protein sequence
MAARGLLLNP NHFDPAWLDP ESRRLLRALI DWFEQRGKAR LLRDDLDGVW VADFLEFVKK 
ERLFATFLTP SEFAEGDPNK RWDTARNAVL SEILGFYGLS YWYAEQVTIL GLGPIWQSDN
VKARERAAAQ LEAGEVMAFG LSERAHGADI YNTDMLLTPA SPGADDPVVF RASGEKYYIG
NGNVAGMVSV FGRRTDVEGA DGYVWFVADS RHPDYELIGN VVHGQMFVSN FALRDYPVYE
EDILATGQDA FSAALNTVNV GKFNLCSGSI GMCEHAFYEA ITHANNRILY GNPVTDFPHV
RATFVDAYAR LIAMKLFSDR AIDYFRSAGP HDRRYLLFNP VTKSKVTSEG EKVVTLLWDV
LAAKGFEKDT YFYQVTRLIG ALPRLEGTVH VNVAQILKFM PNYMFNPAEY PPIGTRDDPA
DDVFFWSQGP ARGASKVRFA DWAPVYERHA GIPNVGRFYE QVQAFKQLLT VSAPDADQQA
DLDFVLVVGH LFSLVVYGQL ILEQAEITGL DRDVLDQIFD VAVRDFSAYA VALHGKPSST
AAQQDWALSA VRKPEPDSGR FDRVWEQVRG YDGVYTMRP