More than 300 homologs were found in PanDaTox collection
for query gene Achl_0630 on replicon NC_011886
Organism: Arthrobacter chlorophenolicus A6



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013441  Gbro_3902  methylmalonate-semialdehyde dehydrogenase  67.99 
 
 
513 aa  701    Gordonia bronchialis DSM 43247  Bacteria  normal  0.560303  n/a   
 
 
-
 
NC_010581  Bind_0618  methylmalonate-semialdehyde dehydrogenase  66.33 
 
 
499 aa  683    Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  0.634768  normal 
 
 
-
 
NC_008705  Mkms_1080  methylmalonate-semialdehyde dehydrogenase [acylating]  67.4 
 
 
506 aa  698    Mycobacterium sp. KMS  Bacteria  normal  normal  0.141199 
 
 
-
 
NC_004310  BR1832  methylmalonic acid semialdehyde dehydrogenase  68.28 
 
 
498 aa  709    Brucella suis 1330  Bacteria  normal  0.800551  n/a   
 
 
-
 
NC_009338  Mflv_5010  methylmalonate-semialdehyde dehydrogenase  68.59 
 
 
506 aa  715    Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal  0.352611 
 
 
-
 
NC_009719  Plav_1446  methylmalonate-semialdehyde dehydrogenase  64.79 
 
 
507 aa  692    Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.494247  normal 
 
 
-
 
NC_009636  Smed_0324  methylmalonate-semialdehyde dehydrogenase  64.5 
 
 
498 aa  664    Sinorhizobium medicae WSM419  Bacteria  normal  0.948085  normal  0.128274 
 
 
-
 
NC_009565  TBFG_10767  methylmalonate-semialdehyde dehydrogenase mmsA  67.06 
 
 
510 aa  701    Mycobacterium tuberculosis F11  Bacteria  hitchhiker  0.0017569  normal  0.759995 
 
 
-
 
NC_009667  Oant_1068  methylmalonate-semialdehyde dehydrogenase  68.28 
 
 
498 aa  704    Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_010505  Mrad2831_3785  methylmalonate-semialdehyde dehydrogenase  66.06 
 
 
498 aa  657    Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.361497  normal 
 
 
-
 
NC_007406  Nwi_2159  methylmalonate-semialdehyde dehydrogenase  63.41 
 
 
510 aa  650    Nitrobacter winogradskyi Nb-255  Bacteria  normal  normal  0.360109 
 
 
-
 
NC_011369  Rleg2_0386  methylmalonate-semialdehyde dehydrogenase  64.44 
 
 
498 aa  692    Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.433719  normal  0.0679471 
 
 
-
 
NC_011886  Achl_0630  methylmalonate-semialdehyde dehydrogenase  100 
 
 
499 aa  1010    Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_007493  RSP_2962  methylmalonate-semialdehyde dehydrogenase  69.17 
 
 
499 aa  685    Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.216142  n/a   
 
 
-
 
NC_008687  Pden_4479  methylmalonate-semialdehyde dehydrogenase  67.75 
 
 
499 aa  677    Paracoccus denitrificans PD1222  Bacteria  normal  normal 
 
 
-
 
NC_007643  Rru_A2071  methylmalonate-semialdehyde dehydrogenase [acylating]  68.43 
 
 
501 aa  675    Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_007778  RPB_2117  methylmalonate-semialdehyde dehydrogenase  66.06 
 
 
498 aa  696    Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.591091 
 
 
-
 
NC_007802  Jann_1913  methylmalonate-semialdehyde dehydrogenase [acylating]  65.93 
 
 
499 aa  671    Jannaschia sp. CCS1  Bacteria  normal  0.815666  normal 
 
 
-
 
NC_007925  RPC_3095  methylmalonate-semialdehyde dehydrogenase  65.86 
 
 
498 aa  692    Rhodopseudomonas palustris BisB18  Bacteria  normal  0.769898  normal  0.126836 
 
 
-
 
NC_011004  Rpal_3940  methylmalonate-semialdehyde dehydrogenase  65.45 
 
 
498 aa  692    Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.90589  n/a   
 
 
-
 
NC_008726  Mvan_1362  methylmalonate-semialdehyde dehydrogenase  68.39 
 
 
534 aa  712    Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_009428  Rsph17025_1389  methylmalonate-semialdehyde dehydrogenase  68.97 
 
 
499 aa  694    Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal 
 
 
-
 
NC_007958  RPD_3302  methylmalonate-semialdehyde dehydrogenase  65.66 
 
 
537 aa  690    Rhodopseudomonas palustris BisB5  Bacteria  normal  normal  0.959449 
 
 
-
 
NC_014158  Tpau_3070  methylmalonate-semialdehyde dehydrogenase  67.86 
 
 
506 aa  699    Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.274558  n/a   
 
 
-
 
NC_007964  Nham_2559  methylmalonate-semialdehyde dehydrogenase  64.02 
 
 
497 aa  656    Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_008044  TM1040_1106  methylmalonate-semialdehyde dehydrogenase [acylating]  67.14 
 
 
499 aa  683    Ruegeria sp. TM1040  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_3578  methylmalonate-semialdehyde dehydrogenase [acylating]  66.46 
 
 
498 aa  689    Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.605326 
 
 
-
 
NC_009505  BOV_1765  methylmalonate-semialdehyde dehydrogenase (acylating)  68.08 
 
 
498 aa  709    Brucella ovis ATCC 25840  Bacteria  normal  0.118464  n/a   
 
 
-
 
NC_008146  Mmcs_1064  methylmalonate-semialdehyde dehydrogenase [acylating]  67.4 
 
 
506 aa  698    Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008254  Meso_3319  methylmalonate-semialdehyde dehydrogenase [acylating]  66.46 
 
 
498 aa  698    Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_009720  Xaut_2193  methylmalonate-semialdehyde dehydrogenase  67.68 
 
 
498 aa  679    Xanthobacter autotrophicus Py2  Bacteria  normal  0.365355  normal  0.620771 
 
 
-
 
NC_012850  Rleg_0419  methylmalonate-semialdehyde dehydrogenase  64.04 
 
 
498 aa  691    Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.214339  hitchhiker  0.00208567 
 
 
-
 
NC_010511  M446_2475  methylmalonate-semialdehyde dehydrogenase  66.67 
 
 
498 aa  701    Methylobacterium sp. 4-46  Bacteria  normal  0.55823  normal  0.220752 
 
 
-
 
NC_009077  Mjls_1091  methylmalonate-semialdehyde dehydrogenase [acylating]  67.4 
 
 
506 aa  698    Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_009049  Rsph17029_1609  methylmalonate-semialdehyde dehydrogenase  69.37 
 
 
499 aa  687    Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal  0.0517581 
 
 
-
 
NC_012803  Mlut_02860  methylmalonate-semialdehyde dehydrogenase (acylating)  71.52 
 
 
508 aa  737    Micrococcus luteus NCTC 2665  Bacteria  normal  n/a   
 
 
-
 
NC_011894  Mnod_2175  methylmalonate-semialdehyde dehydrogenase  66.53 
 
 
500 aa  682    Methylobacterium nodulans ORS 2060  Bacteria  normal  0.210117  n/a   
 
 
-
 
NC_008541  Arth_0420  methylmalonate-semialdehyde dehydrogenase [acylating]  83.17 
 
 
499 aa  870    Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_011989  Avi_0836  methylmalonate-semialdehyde dehydrogenase  64.71 
 
 
498 aa  681    Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_009952  Dshi_1747  acylating methylmalonate-semialdehyde dehydrogenase  68.55 
 
 
499 aa  674    Dinoroseobacter shibae DFL 12  Bacteria  normal  0.207366  normal  0.6572 
 
 
-
 
NC_008347  Mmar10_2838  methylmalonate-semialdehyde dehydrogenase [acylating]  60.08 
 
 
499 aa  625  1e-178  Maricaulis maris MCS10  Bacteria  normal  0.753586  normal 
 
 
-
 
NC_009511  Swit_0652  methylmalonate-semialdehyde dehydrogenase [acylating]  60.28 
 
 
502 aa  623  1e-177  Sphingomonas wittichii RW1  Bacteria  normal  0.198803  normal 
 
 
-
 
NC_009508  Swit_5017  methylmalonate-semialdehyde dehydrogenase [acylating]  58.87 
 
 
499 aa  619  1e-176  Sphingomonas wittichii RW1  Bacteria  normal  0.248363  normal  0.183907 
 
 
-
 
NC_011894  Mnod_2521  methylmalonate-semialdehyde dehydrogenase  61.9 
 
 
499 aa  619  1e-176  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_010725  Mpop_4215  methylmalonate-semialdehyde dehydrogenase  62.1 
 
 
499 aa  609  1e-173  Methylobacterium populi BJ001  Bacteria  normal  normal 
 
 
-
 
NC_009484  Acry_1791  methylmalonate-semialdehyde dehydrogenase  60.48 
 
 
508 aa  607  9.999999999999999e-173  Acidiphilium cryptum JF-5  Bacteria  normal  n/a   
 
 
-
 
NC_009720  Xaut_3248  methylmalonate-semialdehyde dehydrogenase  61.79 
 
 
509 aa  606  9.999999999999999e-173  Xanthobacter autotrophicus Py2  Bacteria  normal  normal 
 
 
-
 
NC_011757  Mchl_1444  methylmalonate-semialdehyde dehydrogenase  61.49 
 
 
499 aa  607  9.999999999999999e-173  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.0424754  normal 
 
 
-
 
NC_010511  M446_1138  methylmalonate-semialdehyde dehydrogenase  61.49 
 
 
499 aa  605  9.999999999999999e-173  Methylobacterium sp. 4-46  Bacteria  normal  normal 
 
 
-
 
NC_010172  Mext_1282  methylmalonate-semialdehyde dehydrogenase  61.29 
 
 
499 aa  604  1.0000000000000001e-171  Methylobacterium extorquens PA1  Bacteria  normal  0.24316  normal 
 
 
-
 
NC_008709  Ping_2399  methylmalonate-semialdehyde dehydrogenase  56.6 
 
 
502 aa  600  1e-170  Psychromonas ingrahamii 37  Bacteria  normal  0.169024  normal  0.676059 
 
 
-
 
NC_007794  Saro_0855  methylmalonate-semialdehyde dehydrogenase [acylating]  58.06 
 
 
498 aa  597  1e-169  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.345114  n/a   
 
 
-
 
NC_010581  Bind_0175  methylmalonate-semialdehyde dehydrogenase  58.99 
 
 
509 aa  593  1e-168  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  0.262954  normal 
 
 
-
 
NC_010338  Caul_1409  methylmalonate-semialdehyde dehydrogenase  58.38 
 
 
498 aa  593  1e-168  Caulobacter sp. K31  Bacteria  normal  0.671216  normal 
 
 
-
 
NC_012912  Dd1591_3343  methylmalonate-semialdehyde dehydrogenase  58.8 
 
 
503 aa  592  1e-168  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_008048  Sala_3049  methylmalonate-semialdehyde dehydrogenase  60.08 
 
 
497 aa  594  1e-168  Sphingopyxis alaskensis RB2256  Bacteria  normal  normal  0.205238 
 
 
-
 
NC_008700  Sama_2650  methylmalonate-semialdehyde dehydrogenase  56.57 
 
 
496 aa  587  1e-166  Shewanella amazonensis SB2B  Bacteria  hitchhiker  0.000962307  normal 
 
 
-
 
NC_013422  Hneap_2368  methylmalonate-semialdehyde dehydrogenase  58.54 
 
 
504 aa  585  1e-166  Halothiobacillus neapolitanus c2  Bacteria  normal  n/a   
 
 
-
 
NC_010678  Rpic_4274  methylmalonate-semialdehyde dehydrogenase  58.54 
 
 
507 aa  582  1.0000000000000001e-165  Ralstonia pickettii 12J  Bacteria  normal  0.463031  normal  0.914985 
 
 
-
 
NC_012857  Rpic12D_4384  methylmalonate-semialdehyde dehydrogenase  58.54 
 
 
507 aa  582  1.0000000000000001e-165  Ralstonia pickettii 12D  Bacteria  normal  normal  0.640119 
 
 
-
 
NC_009379  Pnuc_1035  methylmalonate-semialdehyde dehydrogenase  56.8 
 
 
506 aa  583  1.0000000000000001e-165  Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1  Bacteria  normal  n/a   
 
 
-
 
NC_011138  MADE_01513  methylmalonate-semialdehyde dehydrogenase, putative  55.44 
 
 
499 aa  582  1.0000000000000001e-165  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_1597  methylmalonate-semialdehyde dehydrogenase  55.42 
 
 
506 aa  582  1.0000000000000001e-165  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_012917  PC1_1334  methylmalonate-semialdehyde dehydrogenase  58.15 
 
 
503 aa  580  1e-164  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_009092  Shew_0965  methylmalonate-semialdehyde dehydrogenase  56.57 
 
 
496 aa  579  1e-164  Shewanella loihica PV-4  Bacteria  normal  0.0738299  normal 
 
 
-
 
NC_009708  YpsIP31758_2977  methylmalonate-semialdehyde dehydrogenase  57.67 
 
 
508 aa  579  1e-164  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_010465  YPK_3049  methylmalonate-semialdehyde dehydrogenase  57.46 
 
 
508 aa  577  1.0000000000000001e-163  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_010159  YpAngola_A1877  methylmalonate-semialdehyde dehydrogenase  57.46 
 
 
508 aa  577  1.0000000000000001e-163  Yersinia pestis Angola  Bacteria  normal  hitchhiker  0.00719864 
 
 
-
 
NC_012791  Vapar_3271  methylmalonate-semialdehyde dehydrogenase  57.77 
 
 
502 aa  575  1.0000000000000001e-163  Variovorax paradoxus S110  Bacteria  normal  0.190179  n/a   
 
 
-
 
NC_013421  Pecwa_3003  methylmalonate-semialdehyde dehydrogenase  57.75 
 
 
503 aa  578  1.0000000000000001e-163  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_013440  Hoch_6743  methylmalonate-semialdehyde dehydrogenase  59.07 
 
 
498 aa  577  1.0000000000000001e-163  Haliangium ochraceum DSM 14365  Bacteria  normal  normal 
 
 
-
 
NC_010002  Daci_0980  methylmalonate-semialdehyde dehydrogenase  57.77 
 
 
512 aa  575  1.0000000000000001e-163  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_010551  BamMC406_1351  methylmalonate-semialdehyde dehydrogenase  57.2 
 
 
506 aa  572  1.0000000000000001e-162  Burkholderia ambifaria MC40-6  Bacteria  normal  0.241244  normal 
 
 
-
 
NC_008825  Mpe_A3524  methylmalonate-semialdehyde dehydrogenase [acylating]  59.03 
 
 
506 aa  573  1.0000000000000001e-162  Methylibium petroleiphilum PM1  Bacteria  normal  0.132108  normal  0.367269 
 
 
-
 
NC_007347  Reut_A0249  methylmalonate-semialdehyde dehydrogenase [acylating]  58.38 
 
 
505 aa  574  1.0000000000000001e-162  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_010681  Bphyt_3917  methylmalonate-semialdehyde dehydrogenase  57.69 
 
 
512 aa  570  1e-161  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_008781  Pnap_3801  methylmalonate-semialdehyde dehydrogenase  56.05 
 
 
511 aa  568  1e-161  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.228893  normal  0.75946 
 
 
-
 
NC_008390  Bamb_1312  methylmalonate-semialdehyde dehydrogenase  56.8 
 
 
506 aa  568  1e-161  Burkholderia ambifaria AMMD  Bacteria  normal  0.648779  n/a   
 
 
-
 
NC_011663  Sbal223_3204  methylmalonate-semialdehyde dehydrogenase  54.16 
 
 
496 aa  566  1e-160  Shewanella baltica OS223  Bacteria  normal  0.887195  normal 
 
 
-
 
NC_009665  Shew185_1151  methylmalonate-semialdehyde dehydrogenase  54.36 
 
 
496 aa  565  1e-160  Shewanella baltica OS185  Bacteria  normal  0.11811  n/a   
 
 
-
 
NC_010506  Swoo_1113  methylmalonate-semialdehyde dehydrogenase  54.75 
 
 
496 aa  566  1e-160  Shewanella woodyi ATCC 51908  Bacteria  hitchhiker  0.0000656277  normal 
 
 
-
 
NC_009901  Spea_0935  methylmalonate-semialdehyde dehydrogenase  55 
 
 
501 aa  567  1e-160  Shewanella pealeana ATCC 700345  Bacteria  normal  0.0357372  n/a   
 
 
-
 
NC_009997  Sbal195_1185  methylmalonate-semialdehyde dehydrogenase  54.36 
 
 
496 aa  568  1e-160  Shewanella baltica OS195  Bacteria  normal  0.773308  normal 
 
 
-
 
NC_007951  Bxe_A0015  acylating methylmalonate-semialdehyde dehydrogenase  57.52 
 
 
512 aa  566  1e-160  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_009052  Sbal_1091  methylmalonate-semialdehyde dehydrogenase  54.16 
 
 
496 aa  565  1e-160  Shewanella baltica OS155  Bacteria  decreased coverage  0.00014498  n/a   
 
 
-
 
NC_008060  Bcen_0950  methylmalonate-semialdehyde dehydrogenase  56.19 
 
 
506 aa  566  1e-160  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_009831  Ssed_1043  methylmalonate-semialdehyde dehydrogenase  55.35 
 
 
496 aa  565  1e-160  Shewanella sediminis HAW-EB3  Bacteria  normal  0.0205992  normal  0.342071 
 
 
-
 
NC_008542  Bcen2424_1432  methylmalonate-semialdehyde dehydrogenase  56.19 
 
 
506 aa  566  1e-160  Burkholderia cenocepacia HI2424  Bacteria  normal  n/a   
 
 
-
 
NC_010508  Bcenmc03_1410  methylmalonate-semialdehyde dehydrogenase  56.39 
 
 
506 aa  565  1e-160  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_009654  Mmwyl1_3662  methylmalonate-semialdehyde dehydrogenase  54.77 
 
 
496 aa  563  1.0000000000000001e-159  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_007651  BTH_I3333  methylmalonate-semialdehyde dehydrogenase  57.78 
 
 
508 aa  564  1.0000000000000001e-159  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_007973  Rmet_0206  methylmalonate-semialdehyde dehydrogenase  57.98 
 
 
505 aa  562  1.0000000000000001e-159  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_008321  Shewmr4_2928  methylmalonate-semialdehyde dehydrogenase [acylating]  55.69 
 
 
496 aa  562  1.0000000000000001e-159  Shewanella sp. MR-4  Bacteria  normal  0.0250419  normal 
 
 
-
 
NC_008322  Shewmr7_3010  methylmalonate-semialdehyde dehydrogenase [acylating]  55.08 
 
 
496 aa  561  1.0000000000000001e-159  Shewanella sp. MR-7  Bacteria  normal  0.10059  normal 
 
 
-
 
NC_009438  Sputcn32_1083  methylmalonate-semialdehyde dehydrogenase  54.36 
 
 
496 aa  561  1.0000000000000001e-159  Shewanella putrefaciens CN-32  Bacteria  decreased coverage  0.0000148294  n/a   
 
 
-
 
NC_010625  Bphy_5681  methylmalonate-semialdehyde dehydrogenase  55.98 
 
 
503 aa  560  1e-158  Burkholderia phymatum STM815  Bacteria  normal  normal  0.320797 
 
 
-
 
NC_007760  Adeh_2245  methylmalonate-semialdehyde dehydrogenase [acylating]  59.63 
 
 
500 aa  560  1e-158  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.230017  n/a   
 
 
-
 
NC_008577  Shewana3_3107  methylmalonate-semialdehyde dehydrogenase [acylating]  55.08 
 
 
496 aa  560  1e-158  Shewanella sp. ANA-3  Bacteria  normal  0.281488  normal 
 
 
-
 
NC_007348  Reut_B5828  methylmalonate-semialdehyde dehydrogenase [acylating]  55.38 
 
 
535 aa  555  1e-157  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_008752  Aave_3822  methylmalonate-semialdehyde dehydrogenase [acylating]  56.19 
 
 
506 aa  557  1e-157  Acidovorax citrulli AAC00-1  Bacteria  normal  0.466972  normal 
 
 
-
 
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