| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1106 |
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| Symbol | |
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| ID | 4077813 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 1188053 |
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| End bp | 1189552 |
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| Gene Length | 1500 bp |
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| Protein Length | 499 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 638006410 |
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| Product | methylmalonate-semialdehyde dehydrogenase [acylating] |
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| Protein accession | YP_613101 |
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| Protein GI | 99080947 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
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| TIGRFAM ID | [TIGR01722] methylmalonic acid semialdehyde dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGGAAC TGACCCATTA CGTGAATGGT GAAAAAGTCG CCGGGACCTC CGGCCGTTTT
GCCGACGTTT TGAACCCCGC CACCGGTGAA GTGCAGGCCA AGGTGCCGCT TGCCACCAAG
GCGGAAATGG ACGCAATCAT CGCCAAAGCC GCCGAAGCAC AGGTGGAATG GGCGGCAACC
AACCCGCAAA AACGCGCCCG TGTGATGATG AAGTTCGGCC AACTCATCAA CGAACACATG
GACACGCTCG CAGAACTGGT TGCCCGTGAA CACGGCAAGA CCCTGCCTGA TGCGCGCGGC
GACGTGCAGC GCGGCCTTGA AGTTGTCGAG GTCTGCATGG GCACGCCGAG CCTGCTGAAA
GGCGAATTCA CCGACAGCGG CGGACCGGGC ATCGACCTTT ACTCCATGCG CCAGCCTCTG
GGTGTGGTTG CGGGCATCAC CCCCTTCAAC TTCCCGGCGA TGATCCCCTT GTGGAAAATG
GCCCCTGCCC TCTCGTGCGG CAACGCCATG ATCCTGAAAC CTTCCGAGCG CGTGCCGTCC
ACCTCGCTCT ATCTGGCGGA GCTTCTGAAA GAAGCCGGTC TGCCTGATGG TGTGCTGCAG
GTTGTGAACG GCGACAAGGA AGCCGTGGAC GCGATCCTCG ACAACGAGAC CATTCAGGCC
GTGGGCTTTG TGGGTTCCAC CCCGATTGCG CAGTATATCT ATGGCCGCGC GGCGACCAAC
GGCAAGCGCG CGCAGTGCTT TGGCGGCGCC AAGAACCACA TGCTGATCAT GCCTGATGCG
GATCTCGACA AGGCGGCAGA CGCGCTGGTT GGTGCCGGGT TTGGCGCAGC GGGCGAACGC
TGCATGGCGA TCTCCGTTGC GGTGCCGGTC GGCAAAGAAA CCGCCGATGG CCTCATTGAG
CGTCTGGTGC CCCGCATCGA GAAACTCAAG GTCGGCCCCT ACACCGCCGG TGAGGACATC
GACTACGGCC CCGTGATCAC CCCGCAGGCC AAGGCGCGCA TCGAGGGTCT CATTGACAGC
GGCGTCGAGC AGGGCGCAAC CCTTGTGACC GATGGCCGTG GCCTGACGCT GCAGGGGTAT
GAGAACGGCT ATTTTGTTGG CCCGACCCTC TTTGACAATG TCACCGCCGA GATGGACATT
TACAAAGAAG AGATCTTTGG CCCGGTTCTG TCGACAGTCC GCATGGACAA CTACGAGGAC
GCACTGAACC TTGTCAAAGA CAACGCCTAT GGCAACGGCA CCGCGATCTA CACTGCCGAT
GGTGACACCG CGCGTGACTT TGCCAACCGC GTGAACGTGG GCATGGTCGG TATCAACTTC
CCGATCCCGG TCCCGCTCAG CTACCACACC TTTGGCGGCT GGAAGAAATC GGCCTTTGGC
GATCTGAACC AATATGGCCC CGACGCCTTC CGCTTCTACA CCCGCACCAA GACTGTGACC
CAGCGCTGGT TCTCGGGCAT CAAAGAAGGC GGCGAATTCA ACTTCAAAGC CATGGACTGA
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| Protein sequence | MQELTHYVNG EKVAGTSGRF ADVLNPATGE VQAKVPLATK AEMDAIIAKA AEAQVEWAAT
NPQKRARVMM KFGQLINEHM DTLAELVARE HGKTLPDARG DVQRGLEVVE VCMGTPSLLK
GEFTDSGGPG IDLYSMRQPL GVVAGITPFN FPAMIPLWKM APALSCGNAM ILKPSERVPS
TSLYLAELLK EAGLPDGVLQ VVNGDKEAVD AILDNETIQA VGFVGSTPIA QYIYGRAATN
GKRAQCFGGA KNHMLIMPDA DLDKAADALV GAGFGAAGER CMAISVAVPV GKETADGLIE
RLVPRIEKLK VGPYTAGEDI DYGPVITPQA KARIEGLIDS GVEQGATLVT DGRGLTLQGY
ENGYFVGPTL FDNVTAEMDI YKEEIFGPVL STVRMDNYED ALNLVKDNAY GNGTAIYTAD
GDTARDFANR VNVGMVGINF PIPVPLSYHT FGGWKKSAFG DLNQYGPDAF RFYTRTKTVT
QRWFSGIKEG GEFNFKAMD
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