| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_1312 |
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| Symbol | |
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| ID | 4309021 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008390 |
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| Strand | - |
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| Start bp | 1439305 |
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| End bp | 1440825 |
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| Gene Length | 1521 bp |
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| Protein Length | 506 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 638149121 |
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| Product | methylmalonate-semialdehyde dehydrogenase |
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| Protein accession | YP_773204 |
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| Protein GI | 115351365 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
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| TIGRFAM ID | [TIGR01722] methylmalonic acid semialdehyde dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.648779 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACCCGG TTCCCGCCTA CACGTCCGAC GCCGACGTCG GCCACTACAT CGACGGCGCG
CCCGTTGCCG GCCGCAGCGG CCGCTTCCAG GACGTCCTCA ACCCGGCGCT GGGCCGCGCG
GTGCGCCGCG TCGCGCTCGC CGACGGCGAC GAAGTGCAGC GCGCCGTCGC GTCGGCCCAT
GCCGCGTTCC CGACCTGGGC CGACACGCCG CCGATCCGCC GCGCCCGTGT GCTGCACCGC
TTCCTGCAAC TGATGAACGA GCACCGCGAC ACGCTCGCGG CGATCATCAC GGCCGAGCAC
GGCAAGGTGT TCTCCGACGC GCAGGGCGAA GTCGCGCGCG GCATCGACAT CATCGAGTTC
GCGTGCGGCG TGCCGCAATT GCTGAAGGGC GACTTCACCG ACCAGGTCAG CACCGGCATC
GACAACTGGA CGATGCGCCA GCCGCTCGGC GTCGTCGCGG GCATCACGCC GTTCAACTTC
CCGTGCATGG TGCCGTGCTG GATGTTCCCG GTCGCGCTCG CGACGGGCAA CACGTTCGTG
CTGAAGCCGA GCGAGCGCGA CCCGTCGGCG GCGCTGTTCA TCGCCGACCT GCTCACGCAG
GCCGGCCTCC CCGCCGGCGT GTTCAACGTC GTGCAGGGCG ACAAGGGCGC GGTCGACGCG
CTGCTCGACC ACCCGGACGT GCAGGCCGTC AGCTTCGTCG GCTCGACGCC GATCGCGGCC
TACGTGCAGC AGCGCGCGGT GCAGTCGGGC AAGCGCGTGC AGGCGCTCGG TGGCGCGAAG
AACCACCTCG TCGTGATGCC GGACGCGAAC ATCGAGCAGG CGGTCGATGC GCTGATCGGC
GCCGCGTACG GCTCGGCCGG CGAACGCTGC ATGGCGATCA GCATCGCGGT GCTGGTCGGC
GACGTGGCCG ACCGGATCGT GCCGGCGGTC GCCGAGCGCG CGCGCAAGCT GGTGATCGGC
GACGGGATGC AGCCGGAAGT CGAGATGGGC CCGATCGTCA CCGGCGAAGC GCTCAAGCGC
ATCGAAGGCT ATATCGAGCA AGGCGTCAGC GAAGGCGCGC AACTGGTGGT CGACGGGCGC
GGGCTGCGCG TGCCGGGCCG CGAGGAAGGC TTCTTCACCG GCGGCACGCT GTTCGATCAC
GTGAGCCCCG ACATGCGCAT CTACAAGGAA GAAATCTTCG GGCCGGTGCT CGGCTGCGTG
CGCGTGAAGG ACTTCGGCGA AGCGGTCGAC CTGATCAACG CGCACGAATT CGGCAACGGC
GTCGCCTGCT ACACGAGCGA CGGCGGCATC GCACGCGAGT TCGCGCGGCG CATCCAGGTC
GGCATGGTCG GCATCAACGT GCCGATTCCG GTGCCGATGG CATGGCACGG CTTCGGCGGC
TGGAAGAAGA GCCTGTTCGG CGACATGCAT GCGTACGGCG AGGAAGGCGT GCGCTTCTAC
ACGCGCCAGA AGTCGGTGAT GCAGCGCTGG TCGTCGAGCA TCGGCAAGGG CGCCGAGTTC
GCGATGCCGA CCGCGAAGTA A
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| Protein sequence | MNPVPAYTSD ADVGHYIDGA PVAGRSGRFQ DVLNPALGRA VRRVALADGD EVQRAVASAH
AAFPTWADTP PIRRARVLHR FLQLMNEHRD TLAAIITAEH GKVFSDAQGE VARGIDIIEF
ACGVPQLLKG DFTDQVSTGI DNWTMRQPLG VVAGITPFNF PCMVPCWMFP VALATGNTFV
LKPSERDPSA ALFIADLLTQ AGLPAGVFNV VQGDKGAVDA LLDHPDVQAV SFVGSTPIAA
YVQQRAVQSG KRVQALGGAK NHLVVMPDAN IEQAVDALIG AAYGSAGERC MAISIAVLVG
DVADRIVPAV AERARKLVIG DGMQPEVEMG PIVTGEALKR IEGYIEQGVS EGAQLVVDGR
GLRVPGREEG FFTGGTLFDH VSPDMRIYKE EIFGPVLGCV RVKDFGEAVD LINAHEFGNG
VACYTSDGGI AREFARRIQV GMVGINVPIP VPMAWHGFGG WKKSLFGDMH AYGEEGVRFY
TRQKSVMQRW SSSIGKGAEF AMPTAK
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