| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_2650 |
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| Symbol | |
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| ID | 4604897 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 3175898 |
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| End bp | 3177388 |
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| Gene Length | 1491 bp |
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| Protein Length | 496 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 639782061 |
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| Product | methylmalonate-semialdehyde dehydrogenase |
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| Protein accession | YP_928522 |
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| Protein GI | 119775782 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
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| TIGRFAM ID | [TIGR01722] methylmalonic acid semialdehyde dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.000962307 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAAGCA TTACTCATTT TGTAAATGGC CAGCACACGG CCCCCAGTGC CCGCACCCAG
ACTGTTTTTG AACCCGCAAC AGGTGAGGCC CGTGCCCAGG TGTCGCTGGC AAGCACACAG
GAAGTCGGCG AAGCCATCGC CGTAGCCAAA GCCGCATTTG AGAGCTGGTC TCAGATGACG
CCCCTAAACC GCGCCCGTAT TCTTTTTAAA TTCAAAGCGC TGGTAGAAGC CAATATGGAC
GAACTGGCAC AGCTTATTAC CCGCGAGCAC GGAAAGGTGC TGGACGATGC CAAGGGCGAA
CTTATCCGTG GTCTCGAGGT GGTGGAATTT GCCTGCGGTA TCCCTCATCT GCTTAAGGGA
GAGCACACAG CGCAGGTTGG CACAGGTGTG GATGCCTGGG CGGTAAATCA GCCTCTTGGC
GTGGTAGCCG GTATTGCGCC TTTTAACTTC CCGGTGATGG TGCCCATGTG GATGTTCCCC
ATCGCCATCG CCTGCGGCAA CACCTTTATT ATGAAGCCTT CGGAAAAAGA CCCAAGCTCA
GTGATGCGCA TTGCTGAGCT GCTCAAAGAA GCCGGTTTGC CCGATGGCGT GTTCAACGTG
GTCAATGGCG ATAAAGAAGC TGTGGATACC CTGCTGACCC ATAAAGACAT TCAGGCCGTC
AGCTTTGTAG GCTCCACCCC CATTGCCGAA TACATCTATG CCACGGCTTC TGCCCACGGC
AAACGGGTAC AGGCCCTCGG CGGTGCTAAA AACCATATGC TGCTGATGCC GGATGCTGAT
CTGGATCAGG CGGTCAACGC GCTGATGGGG GCTGCCTATG GCTCGGCCGG TGAGCGCTGT
ATGGCAATTT CCGTGGTATT GGCCGTGGGC GACGCCGGTG ATGCTCTGGT GGAAAAATTG
CTGCCCAAGA TTGCGGCGCT CAAGGTAGGC AACGGGCTGA TCCCCGACAT GGAAATGGGC
CCACTGATTT CGGCCCAGCA TCTGGACAAG GTCTCAAGCT ACGTGGAAGC CGGGGTCCGT
GAAGGCGCCA GCTTGCTGGT TGATGGCCGT GAACTCTCGA TGGAAGACAA AGCAAATGGT
TACTTCCTGG GTGCCTGTCT GTTCGATCAC GTCACACCGC AAATGAGCAT TTATAAAGAA
GAAATCTTTG GCCCTGTGCT CAGCATAGTG CGGGTACCCG ACTACAACAG TGCCCTGCAG
CTTATCAACG ACCACGAGTT TGGTAATGGT ACCGCCATTT TCACCCAAAG TGGTGAGGCC
GCACGCCACT TCTGTCATCA CGTACAGGTG GGCATGGTGG GTGTCAATGT GCCTATTCCT
GTGCCAATGG CCTTCCACAG CTTTGGTGGT TGGAAGCGCT CACTGTTCGG TCCTCTGCAC
ATGCACGGCC CGGACGGCGT ACGCTTTTAT ACCAAGCGCA AGGCTATTAC CGCACGCTGG
CCACAGGGAA AACAGCTGGC TGCTGAGTTT GTAATGCCCA CGATGAAGTA A
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| Protein sequence | MQSITHFVNG QHTAPSARTQ TVFEPATGEA RAQVSLASTQ EVGEAIAVAK AAFESWSQMT
PLNRARILFK FKALVEANMD ELAQLITREH GKVLDDAKGE LIRGLEVVEF ACGIPHLLKG
EHTAQVGTGV DAWAVNQPLG VVAGIAPFNF PVMVPMWMFP IAIACGNTFI MKPSEKDPSS
VMRIAELLKE AGLPDGVFNV VNGDKEAVDT LLTHKDIQAV SFVGSTPIAE YIYATASAHG
KRVQALGGAK NHMLLMPDAD LDQAVNALMG AAYGSAGERC MAISVVLAVG DAGDALVEKL
LPKIAALKVG NGLIPDMEMG PLISAQHLDK VSSYVEAGVR EGASLLVDGR ELSMEDKANG
YFLGACLFDH VTPQMSIYKE EIFGPVLSIV RVPDYNSALQ LINDHEFGNG TAIFTQSGEA
ARHFCHHVQV GMVGVNVPIP VPMAFHSFGG WKRSLFGPLH MHGPDGVRFY TKRKAITARW
PQGKQLAAEF VMPTMK
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