| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_1351 |
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| Symbol | |
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| ID | 6176166 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | - |
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| Start bp | 1498473 |
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| End bp | 1499993 |
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| Gene Length | 1521 bp |
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| Protein Length | 506 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641681106 |
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| Product | methylmalonate-semialdehyde dehydrogenase |
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| Protein accession | YP_001808055 |
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| Protein GI | 172060403 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
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| TIGRFAM ID | [TIGR01722] methylmalonic acid semialdehyde dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.241244 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCCGG TTCCCTCGTA CACGTCCGAC GCCGACGTCG GCCACTACAT CGACGGCGCG
CCCGTTGCCG GCCGCAGCGG CCGCTTCCAG GACGTCCTCA ACCCGGCGCT CGGCCGCGCG
GTGCGCCGCG TCGCGCTCGC CGACGGCGAC GAAGTGCAGC GCGCCGTCGC GTCCGCCCAT
GCCGCGTTCC CGGCCTGGGC CGACACGCCG CCGATCCGCC GCGCACGCGT GCTGCACCGC
TTCCTGCAAC TGATGAACGA GCATCGCGAC ACCCTCGCGG CGATCATCAC GGCCGAGCAC
GGCAAGGTGT TTTCCGACGC GCAGGGCGAA GTCGCGCGCG GCATCGACAT CATCGAATTC
GCATGCGGCG TGCCGCAACT GCTGAAGGGT GACTTCACCG ACCAGGTCAG CACCGGCATC
GACAACTGGA CGATGCGCCA GCCGCTCGGC GTCGTCGCGG GCATCACGCC GTTCAACTTC
CCGTGCATGG TGCCGTGCTG GATGTTTCCG GTCGCGCTCG CGACGGGCAA CACGTTCGTG
CTCAAGCCGA GCGAGCGCGA CCCGTCGGCG GCGCTGTTCA TCGCCGACCT GCTCACGCAG
GCCGGCCTCC CCGCCGGCGT GTTCAACGTC GTGCAGGGCG ACAAGGGCGC GGTCGACGCG
CTGCTCGACC ACCCGGACGT GCAGGCCGTC AGCTTCGTCG GCTCGACGCC GATCGCGGCC
TACGTGCAGC AGCGCGCGGT GCAGTCGGGC AAGCGCGTGC AGGCGCTCGG CGGTGCGAAG
AACCACCTCG TCGTGATGCC GGACGCGAAC ATCGAGCAGG CGGTCGATGC GCTGATCGGC
GCGGCGTACG GCTCGGCCGG CGAACGCTGC ATGGCGATCA GCATCGCGGT GCTGGTCGGC
GACGTGGCCG ACCGGATCGT GCCGGCGGTC GCCGAGCGCG CGCGCAAGCT GGTGATCGGC
GACGGGATGT CGCCGGAAGT CGAGATGGGC CCGATCGTCA CCGGCGAAGC GCTCAAGCGC
ATCGAAGGCT ATATCGAACA AGGCGTCAGC GAAGGCGCGC AACTGGTGGT CGACGGGCGC
GGGCTGCGCG TGCCGGGCCG CGAGGAAGGC TTCTTCACCG GCGGCACGCT GTTCGATCAC
GTGACGCCCG ACATGCGCAT CTACAAGGAA GAAATCTTCG GGCCGGTGCT CGGCTGCGTG
CGCGTGAAGG ACTTCGGCGA AGCCGTCGAC CTCATCAACG CGCACGAGTT CGGCAACGGC
GTCGCCTGCT TCACGAGCGA CGGCGGCATC GCACGCGAAT TCGCGCGGCG CATCCAGGTC
GGCATGGTCG GCATCAACGT GCCGATTCCG GTGCCGATGG CATGGCACGG CTTCGGCGGC
TGGAAGAAGA GCCTGTTCGG CGACATGCAT GCGTACGGCG AGGAAGGCGT GCGTTTCTAC
ACGCGCCAGA AGTCGGTGAT GCAGCGCTGG TCGTCGAGCA TCGGCAAGGG CGCCGAGTTC
GCGATGCCGA CCGCGAAGTA A
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| Protein sequence | MNPVPSYTSD ADVGHYIDGA PVAGRSGRFQ DVLNPALGRA VRRVALADGD EVQRAVASAH
AAFPAWADTP PIRRARVLHR FLQLMNEHRD TLAAIITAEH GKVFSDAQGE VARGIDIIEF
ACGVPQLLKG DFTDQVSTGI DNWTMRQPLG VVAGITPFNF PCMVPCWMFP VALATGNTFV
LKPSERDPSA ALFIADLLTQ AGLPAGVFNV VQGDKGAVDA LLDHPDVQAV SFVGSTPIAA
YVQQRAVQSG KRVQALGGAK NHLVVMPDAN IEQAVDALIG AAYGSAGERC MAISIAVLVG
DVADRIVPAV AERARKLVIG DGMSPEVEMG PIVTGEALKR IEGYIEQGVS EGAQLVVDGR
GLRVPGREEG FFTGGTLFDH VTPDMRIYKE EIFGPVLGCV RVKDFGEAVD LINAHEFGNG
VACFTSDGGI AREFARRIQV GMVGINVPIP VPMAWHGFGG WKKSLFGDMH AYGEEGVRFY
TRQKSVMQRW SSSIGKGAEF AMPTAK
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