| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_1747 |
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| Symbol | mmsA |
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| ID | 5713314 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 1812332 |
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| End bp | 1813831 |
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| Gene Length | 1500 bp |
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| Protein Length | 499 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641267665 |
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| Product | acylating methylmalonate-semialdehyde dehydrogenase |
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| Protein accession | YP_001533090 |
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| Protein GI | 159044296 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
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| TIGRFAM ID | [TIGR01722] methylmalonic acid semialdehyde dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.207366 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.6572 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAGAGT TGAGCCATTT CATCAACGGC AAGCGCGTGG CAGGCACGTC GGGCCGGTTC
GCGGATGTCA TGAACCCGGC CACGGGCGAG GTGCAGGCCA GGGTGCCACT TGCGTCGCCC
GAAGAGCTGG ACGCCGCTGT GGCCGCCGCG GCCGCAGCAC AGCCCGCCTG GGCCGCCACC
AATCCCCAGC GCCGCGCGCG GGTGCTGATG GAATTCGTGC GCCTGTTGAA CCGAGACATG
GACAAGCTGG CCGAGGCCCT GAGCCGCGAG CATGGCAAGA CCCTGCCCGA TGCCAAGGGC
GACGTGGTGC GCGGGCTGGA GGTGGTCGAG TTCTGCATCG GCGCGCCCCA TCTTCTGAAG
GGCGAATTCA CCGACAGCGC GGGTCCGGGC ATCGACATGT ATTCCATGCG CCAGGCCTTG
GGCGTGGTGG CAGGGATCAC CCCGTTCAAC TTCCCCGCCA TGATCCCGAT GTGGAAGATG
GCCCCCGCCC TGGCCTGCGG CAACGCCTTT ATCCTCAAGC CGTCGGAGCG CGATCCGTCC
GTGCCGCTGA TGCTGGCCGA GCTCATGACC GAGGCCGGGC TGCCCGACGG GCTGCTGCAG
GTGATCAACG GCGACAAGGG CGCGGTGGAT GCGATCCTCG ACAATGACAC GATCCAGGCG
ATCGGCTTCG TCGGCTCCAC CCCGATCGCG GAATACATCT ATTCCCGCGG CTGTGCCAAC
GGCAAGCGCG TACAGTGTTT CGGGGGGGCC AAGAACCACA TGATCATCAT GCCGGACGCC
GATCTCGACC AGGCGGCGGA CGCGCTGGTC GGCGCAGGCT ACGGGGCTGC GGGCGAGCGG
TGCATGGCGA TCTCGGTCGC GGTGCCCGTC GGCGAAGAGA CCGCGGACCG GCTGATCGAG
AAGCTGGTGC CGCGGGTCGA GGCGCTGAAG GTCGGGCCCT ATACCTCGGG CACGGATGTC
GATTACGGCC CCGTGGTGAC CGCCGCGGCC AAGGCCAATA TCGAGCGGCT GGTGCAATCC
GGCGTCGATC AGGGCGCCAA GCTGGTGGTG GACGGGCGGG ACTTCTCGCT GCAGGGCTAT
GAAAACGGGT TCTTCGTCGG CCCGCACCTG TTCGACAATG TCTCCAAAGA AATGGACATC
TATCGGACCG AGATTTTCGG CCCCGTTCTG TGCACCGTGC GCGCCAAATC CTACGAGGAA
GCCCTCGGTC TGGCGATGGA CCACGAATAC GGCAACGGCA CCGCGATCTT CACCCGCGAC
GGGGACGCGG CGCGCGACTT CGCCAACCGC ATCAATATCG GTATGGTGGG GATCAACGTG
CCGATCCCGG TGCCGCTGGC CTACCACACC TTCGGCGGCT GGAAGAAGTC CGGATTCGGC
GACCTGAACC AGCACGGGCC AGACGCGTTC CGGTTCTATA CGCGGACCAA GACCGTCACC
GCCCGCTGGC CCTCGGGCAT CAAGGAAGGC GGAGAATTCT CGATCCCCGT GATGGAGTGA
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| Protein sequence | MEELSHFING KRVAGTSGRF ADVMNPATGE VQARVPLASP EELDAAVAAA AAAQPAWAAT
NPQRRARVLM EFVRLLNRDM DKLAEALSRE HGKTLPDAKG DVVRGLEVVE FCIGAPHLLK
GEFTDSAGPG IDMYSMRQAL GVVAGITPFN FPAMIPMWKM APALACGNAF ILKPSERDPS
VPLMLAELMT EAGLPDGLLQ VINGDKGAVD AILDNDTIQA IGFVGSTPIA EYIYSRGCAN
GKRVQCFGGA KNHMIIMPDA DLDQAADALV GAGYGAAGER CMAISVAVPV GEETADRLIE
KLVPRVEALK VGPYTSGTDV DYGPVVTAAA KANIERLVQS GVDQGAKLVV DGRDFSLQGY
ENGFFVGPHL FDNVSKEMDI YRTEIFGPVL CTVRAKSYEE ALGLAMDHEY GNGTAIFTRD
GDAARDFANR INIGMVGINV PIPVPLAYHT FGGWKKSGFG DLNQHGPDAF RFYTRTKTVT
ARWPSGIKEG GEFSIPVME
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