| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal_1091 |
|---|
| Symbol | |
|---|
| ID | 4845701 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS155 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009052 |
|---|
| Strand | - |
|---|
| Start bp | 1256602 |
|---|
| End bp | 1258092 |
|---|
| Gene Length | 1491 bp |
|---|
| Protein Length | 496 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 640118313 |
|---|
| Product | methylmalonate-semialdehyde dehydrogenase |
|---|
| Protein accession | YP_001049482 |
|---|
| Protein GI | 126173333 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
|---|
| TIGRFAM ID | [TIGR01722] methylmalonic acid semialdehyde dehydrogenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.00014498 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTCAAGA TCACTCACTT TGTTAATGGT CAGCACACAC CTGCCAGTAC CAGAACCCAA
GATATTTTTG AACCCGCCAC GGGTGAACTA CGTGGCCAAG TCTCACTCGC AAGCGAAACT
GAAGTGGGTG AAGCCATCGC AATCGCTAAA ACCGCCTTTG AAACATGGTC GCAGGTGACA
CCGCTCAACC GCGCTCGAGT GTTATTTAAA TTCAAAGCCT TAGTTGAGCA GAACCTAGAT
GAAATGGCGC AGCTTATCAC CCGCGAGCAC GGCAAAGTGA TCGACGATGC TAAGGGCGAG
TTGATCCGTG GTCTCGAAGT GGTCGAATTT GCCTGTGGTA TTCCGCACTT GCTTAAAGGT
GAACACACCC AGCAAGTCGG TGGCGGGGTC GATTCTTGGT CAGTTAATCA AGCTTTAGGT
GTTGTCGCAG GCATAGCGCC CTTTAACTTC CCCGTGATGG TTCCCATGTG GATGTTCCCA
ATCGCGATTG CCTGCGGTAA CACCTTTATT ATGAAACCCT CAGAAAAAGA CCCAAGCTCG
GTGATGCGTA TTGCCGAGCT GCTTAAAGAA GCGGGTCTTC CCGATGGCGT GTTTAACGTT
ATTAACGGCG ACAAAGAAGC CGTCGATACC TTACTCACCC ATAAAGATGT GCAAGCGGTG
AGCTTTGTAG GCTCAACGCC AATTGCCGAA TACATCTACA GCACAGCCTC TAAACATGGC
AAACGCGTGC AAGCCTTAGG CGGCGCGAAA AACCATATGT TACTCATGCC AGATGCGGAT
TTAGATCAAG CTGTTAGCGC CTTAATGGGC GCCGCTTACG GCAGTGCTGG CGAGCGTTGT
ATGGCGATTT CAGTCGTGCT CGCGGTAGGT GATGTAGGCG ACGCGTTAGT GGAAAAACTG
CTACCGCAAA TCCAAAGCTT AAAAGTCGGC AACGGCCTGA CGCCAGAGAT GGAAATGGGT
CCGCTGATCT CAAAACAGCA CCTTGCCAAG GTCACCCAAT ATGTTGAAGC CGGTGTGCAA
GAAGGCGCAG CGCTGCTGGT CGATGGCCGT AAACTGAGTC TTGAAGAAAA TCAACAGGGC
TATTTCCTCG GCGCCTGTTT GTTCGACCAC GTCACGCCTG AAATGAGCAT CTACCGCGAA
GAAATCTTTG GGCCAGTGCT GGCGATTGTG CGCGTGAAAG ATTACCCAAC GGCGCTTGAG
CTGATTAACC AACACGAATT TGGCAATGGC ACGGCGATTT TCACCCAAAG TGGTGAAGCG
GCGCGACATT TTTGCCACCA CGTGCAAGTC GGTATGGTTG GAGTGAACGT GCCGATCCCG
GTGCCAATGG CGTTCCACAG TTTTGGCGGT TGGAAGCGAT CACTCTTTGG GCCGCTGCAT
ATGCATGGCC CAGATGGCGT GCGTTTTTAT ACCAAGCGTA AGGCAATTAC TGCCCGCTGG
CCCGTGGGTA AACAGACTCA AGCCGAGTTT GTGATGCCAA CGATGAAATA G
|
|---|
| Protein sequence | MLKITHFVNG QHTPASTRTQ DIFEPATGEL RGQVSLASET EVGEAIAIAK TAFETWSQVT
PLNRARVLFK FKALVEQNLD EMAQLITREH GKVIDDAKGE LIRGLEVVEF ACGIPHLLKG
EHTQQVGGGV DSWSVNQALG VVAGIAPFNF PVMVPMWMFP IAIACGNTFI MKPSEKDPSS
VMRIAELLKE AGLPDGVFNV INGDKEAVDT LLTHKDVQAV SFVGSTPIAE YIYSTASKHG
KRVQALGGAK NHMLLMPDAD LDQAVSALMG AAYGSAGERC MAISVVLAVG DVGDALVEKL
LPQIQSLKVG NGLTPEMEMG PLISKQHLAK VTQYVEAGVQ EGAALLVDGR KLSLEENQQG
YFLGACLFDH VTPEMSIYRE EIFGPVLAIV RVKDYPTALE LINQHEFGNG TAIFTQSGEA
ARHFCHHVQV GMVGVNVPIP VPMAFHSFGG WKRSLFGPLH MHGPDGVRFY TKRKAITARW
PVGKQTQAEF VMPTMK
|
|---|
| |