| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_3302 |
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| Symbol | |
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| ID | 4023812 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 3656747 |
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| End bp | 3658360 |
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| Gene Length | 1614 bp |
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| Protein Length | 537 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637963506 |
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| Product | methylmalonate-semialdehyde dehydrogenase |
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| Protein accession | YP_570427 |
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| Protein GI | 91977768 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
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| TIGRFAM ID | [TIGR01722] methylmalonic acid semialdehyde dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.959449 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGCTTC AAGGTGATCT CTGCATTTTG GCAGGCGTCT CACGCGCGCA GGCCCTTCCC
AAAGATCAAA AAAGGCTGTT CAAGGGGACC AGAAAACAGC CTTTCAGGAG GATACGGATG
CGCACGATCG GGCACTTCAT CGGCGGCAAA GAGGTCGAAG GCAAGTCGGG ACGTTTCGCC
GACGTATTCG AGCCGATGAC CGGCGAGGTC AAAGCCAAGG TCGCGCTCGC CACCCGCGCC
GAGCTGCGCG CCGCCGTCGA GAACGCCAGG GCCGCGCAGC CGGAATGGGG CGCGACCAAC
CCGCAGCGCC GCGCCCGCGT GATGATGAAG TTCCTCGACC TGGTGCAGCG CGACTACGAC
AAGCTCGCCG AGTTGCTGGC GCGCGAGCAC GGCAAGACCA TTCCGGACGC CAAGGGCGAC
ATCCAGCGCG GTCTCGAAGT CGCCGAGTTC GCCTGCGGCA TTCCGCATCT GATGAAGGGC
GAATACACCG AAGGCGCCGG CCCCGGCATC GACATCTATT CGATGCGCCA GCCGCTCGGC
GTGGTCGCCG GCATCACCCC GTTCAACTTC CCGGCGATGA TCCCGATGTG GAAGTTCGCC
CCCGCGATCG CCTGCGGCAA CGCTTTCATC CTGAAGCCGT CGGAGCGCGA TCCCGGCGTG
CCGATGGCGC TTGCGGCTTT GATGATCGAG GCGGGGCTGC CGCCCGGCAT CCTCAACGTC
GTCAACGGCG ACAAGGAGGC GGTCGACGCC ATTCTCGATG ACGCCGACAT CCGCGCGGTC
GGCTTCGTCG GCTCGTCGCC GATCGCGCAA TATATTTACG AGCGCGCGGC GGCGACCGGC
AAGCGCGCCC AGTGCTTCGG CGGCGCCAAG AATCACGCCA TCATCATGCC CGACGCCGAC
ATCGACCAGA CCGTCGACGC GCTGATCGGC GCGGGTTTCG GCTCGGCCGG CGAACGCTGC
ATGGCGATCT CGGTCGCGGT GCCGGTCGGT AAGGCGACCG CGGACAGGCT GATGGAAAAG
CTGATCCCGC GCGTCGAAGC GCTGAAGATC GGTCCCTCGA CCGATCCATC GGCCGATTTC
GGTCCGCTGG TGACGCGTGA GGCGCTGGAG CGCGTCAAGA ACTACGTCGA TATCGGCGTC
AAGGAGGGCG CGACGTTGGC CGTCGACGGC CGCAATTTCA AGCTGCAAGG CTATGAGAAC
GGCTTCTACA TGGGCGGCTG CCTGTTCGAC AACGTCACCC GCGACATGCG GATCTACAAG
GAAGAGATCT TCGGCCCGGT GCTGAGCGTG GTGCGCGCCC ACGATTACGC CGAAGCGCTC
GCGCTGCCCT CGGACCATGA TTACGGCAAC GGCGTTGCGA TCTTCACCCG CGACGGCGAC
GCCGCCCGCG ACTTCGCGGC GAAGGTCAAT GTCGGCATGG TCGGCATCAA CGTGCCGATC
CCGGTGCCGA TCGCCTACTA CACGTTCGGC GGCTGGAAGA AGTCCGGCTT CGGCGATCTC
AACCAGCACG GTCCGGATTC GGTGCGGTTC TACACCAAGA CCAAGACCGT CACCTCGCGC
TGGCCCTCCG GCGTCAAGGA AGGCGCGGAG TTCTCGATCC CGTTGATGAA GTAG
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| Protein sequence | MPLQGDLCIL AGVSRAQALP KDQKRLFKGT RKQPFRRIRM RTIGHFIGGK EVEGKSGRFA
DVFEPMTGEV KAKVALATRA ELRAAVENAR AAQPEWGATN PQRRARVMMK FLDLVQRDYD
KLAELLAREH GKTIPDAKGD IQRGLEVAEF ACGIPHLMKG EYTEGAGPGI DIYSMRQPLG
VVAGITPFNF PAMIPMWKFA PAIACGNAFI LKPSERDPGV PMALAALMIE AGLPPGILNV
VNGDKEAVDA ILDDADIRAV GFVGSSPIAQ YIYERAAATG KRAQCFGGAK NHAIIMPDAD
IDQTVDALIG AGFGSAGERC MAISVAVPVG KATADRLMEK LIPRVEALKI GPSTDPSADF
GPLVTREALE RVKNYVDIGV KEGATLAVDG RNFKLQGYEN GFYMGGCLFD NVTRDMRIYK
EEIFGPVLSV VRAHDYAEAL ALPSDHDYGN GVAIFTRDGD AARDFAAKVN VGMVGINVPI
PVPIAYYTFG GWKKSGFGDL NQHGPDSVRF YTKTKTVTSR WPSGVKEGAE FSIPLMK
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