| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_0935 |
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| Symbol | |
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| ID | 5661334 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 1141341 |
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| End bp | 1142846 |
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| Gene Length | 1506 bp |
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| Protein Length | 501 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 641235480 |
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| Product | methylmalonate-semialdehyde dehydrogenase |
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| Protein accession | YP_001500797 |
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| Protein GI | 157960763 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
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| TIGRFAM ID | [TIGR01722] methylmalonic acid semialdehyde dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0357372 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCACACCA TTAACCATTA CATTAACGGC GGTCACTCTG CGCCAAGCCA ACGTACTCAA
GCTTTCTTCG AGCCTGCAAC AGGTGAGCAA CGTGGCACAG TCTCTCTTGC TAGCGCCGTT
GAAGTCGCTG GCGTCATCGA AATTGCAAAA AAAGCCCATG AGTCATGGTC TAAAGTCACG
CCGCTTAATC GCTCTCGCGT ACTGTTTAAG TTTAAAGCCT TAGTCGAAGC CAATATGGAT
GAGCTTGCAG AGCTTATCAC CCGTGAACAC GGCAAGGTAC TTGACGATGC AAAAGGTGAA
ATCATTCGTG GCCTTGAAGT CGTCGAGTTT GCCTGTGGCA TTCCACACCT GTTGAAAGGC
GAGCATACCG AGCAGGTCGG TGGTGGCGTC GATGCTTGGA CCCTTAACCA GTCACTCGGC
GTCGTTGCGG GTATTGCCCC GTTTAACTTT CCAGTAATGG TGCCTATGTG GATGTTCCCT
ATCGCAATTG CTTGCGGTAA CAGCTTCATC ATGAAGCCAT CGGAAAAAGA CCCAAGCTCT
GTAATGCGCA TGGCCGAACT CCTCACCGAA GCAGGCTTGC CAAATGGCGT ATTTAACGTG
GTTAACGGCG ACAAAGAAGC CGTTGATACC CTACTGACAC ACAAAGATGT GCAAGCGGTT
AGCTTTGTCG GTTCAACCCC AATTGCCGAG TATATCTACT CAACAGCATC GGCTCACGGC
AAGCGCGTCC AAGCCCTAGG CGGCGCGAAG AATCATATGC TATTGATGCC CGATGCCGAT
CTTGACCAAG CGGTTGGCGC CTTGATGGGC GCGGCGTATG GTAGTGCAGG CGAGCGATGC
ATGGCGATTT CTGTGGTATT GGCTGTAGGT GAATCGGGCG ATGCATTAGT CGAAAAACTG
CTGCCACAGA TCAAGGCGCT TAAAGTCGGC AATGGCGTCA CCCCAGAGAT GGACATGGGC
CCACTTATCT CGGCTCAGCA TCTGGAAAAG GTCAGCAATT ATGTCGAAAC TGGCGTCAAT
GAGGGTGCTC AGCTACTTGC CGATGGGCGA GAGCTATCTG TTACCGATCA CCAGCAAGGC
TACTTCTTAG GTGGCTGCTT GTTTGACCAT GTGACCCCAG AGATGACCAT TTATAAGGAA
GAGATCTTCG GTCCTGTTCT CGCCATCGTG CGCGTAAAAG ATTACAGCGA AGCGCTGCAA
CTAATAAACG ATCATGAATT TGGTAATGGC ACCGCCATCT TCACTCAAAG TGGTGAGGCT
GCGCGCCACT TCTGCCACAA CGTACAAGTG GGCATGGTAG GCGTAAACGT GCCAATTCCT
GTGCCGATGG CATTCCATAG CTTTGGTGGC TGGAAGCGTT CTCTGTTTGG TCCTCTGCAT
ATGCATGGCC CAGATGGTGT GCGTTTCTAT ACCAAGCGCA AAGCCATTAC CGCTCGTTGG
CCGCAATCGA CTAACAAGAG TGCCGCTGGC ACCAAGGCCG AGTTTGTGAT GCCGACAATG
AAGTAA
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| Protein sequence | MHTINHYING GHSAPSQRTQ AFFEPATGEQ RGTVSLASAV EVAGVIEIAK KAHESWSKVT
PLNRSRVLFK FKALVEANMD ELAELITREH GKVLDDAKGE IIRGLEVVEF ACGIPHLLKG
EHTEQVGGGV DAWTLNQSLG VVAGIAPFNF PVMVPMWMFP IAIACGNSFI MKPSEKDPSS
VMRMAELLTE AGLPNGVFNV VNGDKEAVDT LLTHKDVQAV SFVGSTPIAE YIYSTASAHG
KRVQALGGAK NHMLLMPDAD LDQAVGALMG AAYGSAGERC MAISVVLAVG ESGDALVEKL
LPQIKALKVG NGVTPEMDMG PLISAQHLEK VSNYVETGVN EGAQLLADGR ELSVTDHQQG
YFLGGCLFDH VTPEMTIYKE EIFGPVLAIV RVKDYSEALQ LINDHEFGNG TAIFTQSGEA
ARHFCHNVQV GMVGVNVPIP VPMAFHSFGG WKRSLFGPLH MHGPDGVRFY TKRKAITARW
PQSTNKSAAG TKAEFVMPTM K
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