| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpau_3070 |
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| Symbol | |
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| ID | 9157241 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Tsukamurella paurometabola DSM 20162 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014158 |
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| Strand | - |
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| Start bp | 3184234 |
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| End bp | 3185754 |
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| Gene Length | 1521 bp |
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| Protein Length | 506 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | |
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| Product | methylmalonate-semialdehyde dehydrogenase |
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| Protein accession | YP_003648001 |
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| Protein GI | 296140758 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.274558 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGACAC GGGCGATCCC GCACTTCATC GACGGCCGGC GCGTGGAGGG CACCGGCCGT
ACGGCCGAGG TCTTCGACCC CAGCACCGGT GCGGTCCAGG CGACGGTCCC CCTGGCCACC
ACCGCCGAGG TCGACGATGT GGTCGCCCGC GCGAAGGAGG CGCAGAAGGT GTGGGCCGCC
TACAACCCTC AGCGCCGCGC CCGCGTCTTC ATGAAGTTCA TCGAACTCGT GCACCAGAAC
ATGGACGAGC TCGCCTCGCT GCTGTCCAGC GAGCACGGCA AGACCCTCGC CGACGCCGCG
GGAGACATCC AGCGTGGCAT CGAGGTCATC GAGTTCTCCA TCGGCATCCC GCACCTGCTC
AAGGGTGAGT ACACCGAGGG CGCGGGCACC GGCATCGACG TGTACTCGAT GCGCCAGCCG
CTCGGCGTGG TCGCCGGGAT CACCCCGTTC AACTTTCCCG CCATGATTCC GTTGTGGAAG
GCCGGCCCCG CCCTGGCGTG CGGTAACGCC TTCGTGCTCA AGCCCTCCGA GCGCGATCCC
TCGGTCCCCG TCCGCCTCGC CGAGCTCTTC ATCGAGGCCG GTCTTCCCGA GGGCGTCTTC
CAAGTCGTCC ACGGCGATAA GGAGTCGGTG GACGCGCTGC TGAACAACCC CGACATCAAG
GCCGTCGGCT TCGTCGGCAG CTCCGATATC GCGCAGTACA TCTACGAGAC CGCCGCGAAG
AACGGCAAGC GCAGTCAGGC CTTCGGTGGT GCCAAGAACC ACATGATCGT CCTCCCCGAC
GCCGATCTCG ATCAGGCCGT GGACGCTCTG ATCGGTGCAG GCTACGGCTC CGCCGGCGAG
CGCTGCATGG CGATCTCCGT GGCGGTGCCC GTCGGCGAGG AGACCGCCAA CCGGCTCCGC
GAGCGGCTCG TCGAGCGCGT GCAGCAGTTG CGTGTCGGCC ACAGTCACGA CCCGAAGGCC
GACTACGGAC CACTGATCAC CCCCGCGGCC GTCGAGCGCA CCCGCAGCTA CATCCAGCAG
GGTGTGGATG CCGGCGCCGA CCTCGTGGTC GACGGTCGCG AGCGCGCGAG CGACGAGCTG
ACCTTCGGTG ACGCCGACCT CTCCGGCGGC AACTACCTCG GTCCCACGCT GTTCGACCAC
GTCACCAAGG ACATGTCGAT CTACACCGAC GAGATCTTCG GCCCGGTCCT GTGCATCGTG
CGCGCCAAGG ACTACGAGGA GGCCATCGCA CTGCCCACCG AGCACGAGTA CGGCAACGGC
GTGGCCATCT TCACCCGCGA CGGCGACGCG GCCCGCGACT TCGTGGCCCG CGTCGAGGTC
GGCATGGTGG GCGTCAACGT CCCGATCCCG GTTCCCGTGG CGTACCACAC CTTCGGCGGC
TGGAAGCGTT CCGGCTTCGG CGATCTGAAC CAGCACGGCC CGCACTCGAT CCTGTTCTAC
ACCAAGACCA AGACGGTCAC CTCGCGCTGG CCGTCCGGCA TCAAGGACGG TGCCGAGTTC
TCCATCCCGA CGATGCGCTG A
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| Protein sequence | MATRAIPHFI DGRRVEGTGR TAEVFDPSTG AVQATVPLAT TAEVDDVVAR AKEAQKVWAA
YNPQRRARVF MKFIELVHQN MDELASLLSS EHGKTLADAA GDIQRGIEVI EFSIGIPHLL
KGEYTEGAGT GIDVYSMRQP LGVVAGITPF NFPAMIPLWK AGPALACGNA FVLKPSERDP
SVPVRLAELF IEAGLPEGVF QVVHGDKESV DALLNNPDIK AVGFVGSSDI AQYIYETAAK
NGKRSQAFGG AKNHMIVLPD ADLDQAVDAL IGAGYGSAGE RCMAISVAVP VGEETANRLR
ERLVERVQQL RVGHSHDPKA DYGPLITPAA VERTRSYIQQ GVDAGADLVV DGRERASDEL
TFGDADLSGG NYLGPTLFDH VTKDMSIYTD EIFGPVLCIV RAKDYEEAIA LPTEHEYGNG
VAIFTRDGDA ARDFVARVEV GMVGVNVPIP VPVAYHTFGG WKRSGFGDLN QHGPHSILFY
TKTKTVTSRW PSGIKDGAEF SIPTMR
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