| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bind_0618 |
|---|
| Symbol | |
|---|
| ID | 6201853 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beijerinckia indica subsp. indica ATCC 9039 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010581 |
|---|
| Strand | - |
|---|
| Start bp | 698286 |
|---|
| End bp | 699785 |
|---|
| Gene Length | 1500 bp |
|---|
| Protein Length | 499 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 641704614 |
|---|
| Product | methylmalonate-semialdehyde dehydrogenase |
|---|
| Protein accession | YP_001831757 |
|---|
| Protein GI | 182677611 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
|---|
| TIGRFAM ID | [TIGR01722] methylmalonic acid semialdehyde dehydrogenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.634768 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACGCTCG AGCTCAGCCA CTTCATTGGC GGCCAGCATA TTGCTGGCAA ATCAGGTCAG
TTCGCCGATG TATTCACGCC GATGACCGGC GAGATTTCCG CGCGTGTTCC CCTTGCTGGC
CAGGCCGAGC TCAATGCGGC GGTTGAGAAT GCCAAAGCGG CGCAACCGGC CTGGGCAGCG
CTGAACCCGC AAAAGCGCGG TCGCGTGATG ATGGAGTTTC TCCGGCTGAT CCAACGCGAT
TACACGGCTC TGGCCGAATT GCTCGCTTCC GAGCACGGCA AAACCGTTCT CGATGCACGC
GGCGACATCC AGCGTGGTCT TGAAGTGGTC GAATTCACCT GCGGCATCGC GCATTTGCTG
AAGGGTGAAT ACACCGACGG TGCAGGGCCG GGCATCGATA TCTATTCGAT GCGTCAACCG
CTCGGCGTCG TCGCCGGCAT TACGCCCTTC AATTTTCCTG CGATGATCCC GATGTGGAAA
CTCGCGCCCG CGATCGCCTG CGGCAACGCC TTTATTCTCA AACCCTCGGA GCGGACGCCC
TCGGTACCTC TACGTCTTGC TGAGTTGATG CTGGAGGCCG GCTTGCCCGC GGGCATCTTG
AATGTTGTCC ATGGAAATAA GGATGTGGTC GACGCGATTA TCGATCACCC CGATATCAAA
GCGATCGGCT TTGTCGGCTC GACCACGATC GCCGAATATA TTTACTCGAG AGGCTGCTCG
GCCGGCAAGC GCGTGCAATG TTTCGGTGGG GCTAAAAATC ACATGGTCAT CATGCCGGAC
GCGGATCTCG ATCAAGTCAC CGATGCTTTG GTTGGTGCCG GTTACGGATC GGCTGGCGAG
CGTTGCATGG CGATTTCAGT TGCCGTGCCG ATCGGAGAAA AAACCGCGGA CGCTTTGTTG
GAACGCCTCG TGCCACGGGT CGAGAGTCTG CGGATTGGCC TTTCCAATGA CAACGATGCC
GATTTCGGCC CTCTCATCAG CCGTGAAGCC GTGAATCGTG TTCGCGATTA TGTCGATATC
GGCGTCAAGG AAGGGGCGAC CTTGCGAGTG GACGGACGCG GGTTCACCAT GCAAGGCTAT
GAAAAGGGCT TTTACATGGG TGGGACGCTG TTCGACCATG TAACACCAAA GATGCGCATC
TATCGTGAAG AGATTTTCGG CCCTGTCTTG TCGATTGCGC GCGCGGCAAA TTATGAACAA
GCGCTGCACA TGACCAATGA ACATGAATAT GGCAATGGTG TCGCCATTTT CACGCGCGAT
GGCGATGCTG CGCGCGATTT CGTCAGCAAG GTTCAGGTCG GCATGGTCGG CGTGAATGTG
CCGATCCCCG TGCCGCTGGC CTATTATACA TTCGGCGGCT GGAAGCGGTC CGCCTTCGGT
GATCTCAATC AGCATGGTCC CGACGCGATC CGCTTTTACA CGAAGACCAA GACCGTCACC
TCGCGCTGGC CGTCTGGCAT CAAGGATGGA GCAAGCTTCG TCATCCCAAC CATGAACTGA
|
|---|
| Protein sequence | MTLELSHFIG GQHIAGKSGQ FADVFTPMTG EISARVPLAG QAELNAAVEN AKAAQPAWAA
LNPQKRGRVM MEFLRLIQRD YTALAELLAS EHGKTVLDAR GDIQRGLEVV EFTCGIAHLL
KGEYTDGAGP GIDIYSMRQP LGVVAGITPF NFPAMIPMWK LAPAIACGNA FILKPSERTP
SVPLRLAELM LEAGLPAGIL NVVHGNKDVV DAIIDHPDIK AIGFVGSTTI AEYIYSRGCS
AGKRVQCFGG AKNHMVIMPD ADLDQVTDAL VGAGYGSAGE RCMAISVAVP IGEKTADALL
ERLVPRVESL RIGLSNDNDA DFGPLISREA VNRVRDYVDI GVKEGATLRV DGRGFTMQGY
EKGFYMGGTL FDHVTPKMRI YREEIFGPVL SIARAANYEQ ALHMTNEHEY GNGVAIFTRD
GDAARDFVSK VQVGMVGVNV PIPVPLAYYT FGGWKRSAFG DLNQHGPDAI RFYTKTKTVT
SRWPSGIKDG ASFVIPTMN
|
|---|
| |