| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_5017 |
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| Symbol | |
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| ID | 5195955 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009508 |
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| Strand | - |
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| Start bp | 133173 |
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| End bp | 134672 |
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| Gene Length | 1500 bp |
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| Protein Length | 499 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640579450 |
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| Product | methylmalonate-semialdehyde dehydrogenase [acylating] |
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| Protein accession | YP_001260398 |
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| Protein GI | 148550968 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
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| TIGRFAM ID | [TIGR01722] methylmalonic acid semialdehyde dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 48 |
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| Plasmid unclonability p-value | 0.248363 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.183907 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCATTA TCGACAATTT CATCGGCGGC CATCATCAGG CATCGACTTC CACCCGGCTG
GGCGATGTGT TCGATCCGGC GACCGGCAGG GTACAGGCGC AGGTTCGCCT GTCCGACCCC
ACCGAACTGG ACGCAGCCGT CGCCAATACG CAGGCGGCCC AGCCTGCCTG GGCAGCGATG
AACCCGCAGC GCCGCGCGCG GGTGATGTTC AATCTCAAGG CCCTGATCGA AAAGCATATG
GATGAACTGG CCGAAATGCT GTCGGCCGAA CATGGCAAGG TGCATTCGGA TTCCAAGGGC
GATATCCAGC GCGGCCTCGA TGTAGTGGAG TTCGCCTGTG GCATTCCGCA TCTTTTGAAA
GGCGAATATA CGGAAGGGGC AGGGCCGGGG ATCGACGTGT ATTCGATGCG TCAGCCGATC
GGCATCGCGG CGGGCATAAC GCCGTTCAAC TTTCCTGCAA TGATCCCGAT GTGGATGTTC
GCGCCCGCAA TTGCGTGCGG CAACGCATTT ATCCTGAAGC CGTCAGAGCG CAATCCGTCG
GTACCGGTCA GGCTGGCCGA ACTGGCCATG GAAGCGGGGC TGCCAGCAGG CATCCTCAAT
GTCGTCCATG GCGACAAGCA GGTCGTGGAC GCTATTCTCG ACAATCCTGC GATCCGCGCG
GTCAGCTTTG TCGGATCGTC CGATATCGCC CAATATGTCT ATGGACGCGG CGCATCGAAC
GGCAAGCGGA TGCAGTGCAT GGGCGGGGCG AAGAATCATG GCATCGTCAT GCCAGACGCC
GATCTGGATC AGGCGGTCGC CGACATTCTG GGCGCTGCCT ATGGCTCGGC GGGCGAACGC
TGCATGGCGT TGCCGGTGGT CGTGCCGGTG GGCGAAGCGA CTGCGGTGGC GCTGCGGGCA
AAGCTGGAGA CCGGCATCGC AGGCTTGCGG GTCGGCGTGC CGAGCGATCC TGACGCCCAT
TACGGCCCGG TGGTCAGTTC GGCGCACAAG GCACGGATCG AAAACTATAT CCAACTGGCG
GTCGATGAAG GGTCTGAGCT GGTCGTCGAT GGGCGCGGGT TCGCACTCCA GGGCTATGAG
GACGGCTTCT TTCTGGCGCC CACGCTGCTC GACCATGTGA AGCCGGACAT GCAAAGCTAT
AACGAAGAGA TTTTCGGCCC GGTGCTGCAG ATGGTGCGGG CGCAGACGTT CGAAGAAGCT
CTGAGCTATC CGACGAAGCA TCAATATGGC AACGGCGTGG CGATCTTCAC CCGCAATGGC
GATTATGCGC GGAAATTCTG CGCCAATGTC GAAGTCGGCA TGGTCGGCAT CAACGTGCCG
ATCCCGGTGC CGGTAAGCTA TCACAGCTTT GGCGGGTGGA AGCGGTCGGG CTTTGGCGAC
ATGAACCAAT ATGGCATGGA GGGCGTGCGC TTCTACACCC GGGTCAAGAC TATCACGCAG
CGTTGGCCCA GCGGCGGCGC GGTGATGGAC CAGAGCTTTG TCATTCCGAC CATGGGTTGA
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| Protein sequence | MRIIDNFIGG HHQASTSTRL GDVFDPATGR VQAQVRLSDP TELDAAVANT QAAQPAWAAM
NPQRRARVMF NLKALIEKHM DELAEMLSAE HGKVHSDSKG DIQRGLDVVE FACGIPHLLK
GEYTEGAGPG IDVYSMRQPI GIAAGITPFN FPAMIPMWMF APAIACGNAF ILKPSERNPS
VPVRLAELAM EAGLPAGILN VVHGDKQVVD AILDNPAIRA VSFVGSSDIA QYVYGRGASN
GKRMQCMGGA KNHGIVMPDA DLDQAVADIL GAAYGSAGER CMALPVVVPV GEATAVALRA
KLETGIAGLR VGVPSDPDAH YGPVVSSAHK ARIENYIQLA VDEGSELVVD GRGFALQGYE
DGFFLAPTLL DHVKPDMQSY NEEIFGPVLQ MVRAQTFEEA LSYPTKHQYG NGVAIFTRNG
DYARKFCANV EVGMVGINVP IPVPVSYHSF GGWKRSGFGD MNQYGMEGVR FYTRVKTITQ
RWPSGGAVMD QSFVIPTMG
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