| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_2117 |
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| Symbol | |
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| ID | 3908531 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 2408594 |
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| End bp | 2410090 |
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| Gene Length | 1497 bp |
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| Protein Length | 498 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637884010 |
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| Product | methylmalonate-semialdehyde dehydrogenase |
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| Protein accession | YP_485734 |
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| Protein GI | 86749238 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
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| TIGRFAM ID | [TIGR01722] methylmalonic acid semialdehyde dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.591091 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCACCA TCGGGCACTT CATCGGCGGC AAAGAGGTCG AGGGGAAGTC GGGCCGTTTC
GCCGACGTGT TCGAGCCGAT GACCGGCGAG GTCAAGGCCA AGGTCGCGCT CGCCACCAAG
GCGGAGATGC GCGCCGCGAT CGAAAACGCC AAGGCCGCGC AGCCGGAATG GGGCGCCACC
AACCCGCAGC GCCGCGCCCG CGTGCTGATG AAGTTCCTCG ACCTGGTGCA GCGCGACTAC
GACAAGCTCG CCGAGTTGCT GGCGCGCGAG CACGGCAAGA CCATTCCCGA CGCCAAGGGC
GACATCCAGC GCGGCCTCGA AGTCGCCGAA TTCGCCTGCG GCATTCCGCA TCTGATGAAG
GGTGAATACA CCGAGGGCGC CGGCCCGGGC ATCGACATCT ATTCGATGCG GCAACCCCTG
GGAGTCGTCG CCGGCATCAC CCCGTTCAAC TTCCCGGCGA TGATCCCGAT GTGGAAGTTC
GCGCCCGCCA TCGCCTGCGG CAACGCCTTC ATCCTGAAGC CGTCGGAGCG CGATCCCGGC
GTGCCGATGG CGCTGGCCGC CCTGATGCTC GAAGCCGGCC TGCCGCCGGG CATCCTCAAC
GTCGTCAACG GCGACAAGGA AGCGGTCGAC GCCATTCTCG ACGACGCCGA CATCCGCGCC
GTCGGCTTCG TCGGCTCGTC GCCGATCGCG CAATACATCT ACGAGCGCGC GGCGGCGACC
GGCAAGCGCG CGCAGTGCTT CGGCGGCGCC AAGAACCACG CCATCATCAT GCCCGACGCC
GACCTGGACC AGACCGTCGA CGCGCTGATC GGCGCCGGCT ACGGCTCGGC CGGCGAGCGC
TGCATGGCGA TCTCGGTCGC GGTGCCGGTC GGCAAGTCGA CCGCCGACAG GCTGATGGAA
AAACTGATCC CGCGCGTCGA GGCGCTGAAG ATCGGTCCCT CGACCGATCC GTCCGCCGAT
TTCGGCCCGC TGGTCACCAG GGAAGCGCTG GAGCGCGTCA AGACCTACGT CGAGATCGGC
GTCCAGGAAG GCGCCACGCT CGCCGTCGAC GGTCGCGGCT TCAAGATGCA GGGCTACGAG
AACGGCTTCT ACATGGGCGG CTGTCTGTTC GACAACGTCA CGAAGGATAT GCGGATCTAC
AAGGAAGAGA TCTTCGGTCC GGTGCTCAGC GTGGTCCGCG CCCACGACTA CGCCGAAGCG
CTGGCGCTGC CGTCCGACCA CGACTACGGC AACGGCGTCG CGATCTTCAC CCGCGACGGC
GACGCCGCGC GCGACTTCGC CGCGAAGGTG AATGTCGGCA TGGTCGGCAT CAACGTGCCG
ATCCCGGTGC CGATCGCCTA CTACACGTTC GGCGGCTGGA AGAAGTCCGG CTTCGGCGAC
CTCAACCAGC ACGGCCCGGA TTCGGTGCGG TTCTATACCA AGACCAAGAC CGTGACCTCG
CGCTGGCCCT CCGGCGTCAA GGAAGGCGCG GAGTTCTCGA TCCCGCTGAT GAAGTGA
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| Protein sequence | MRTIGHFIGG KEVEGKSGRF ADVFEPMTGE VKAKVALATK AEMRAAIENA KAAQPEWGAT
NPQRRARVLM KFLDLVQRDY DKLAELLARE HGKTIPDAKG DIQRGLEVAE FACGIPHLMK
GEYTEGAGPG IDIYSMRQPL GVVAGITPFN FPAMIPMWKF APAIACGNAF ILKPSERDPG
VPMALAALML EAGLPPGILN VVNGDKEAVD AILDDADIRA VGFVGSSPIA QYIYERAAAT
GKRAQCFGGA KNHAIIMPDA DLDQTVDALI GAGYGSAGER CMAISVAVPV GKSTADRLME
KLIPRVEALK IGPSTDPSAD FGPLVTREAL ERVKTYVEIG VQEGATLAVD GRGFKMQGYE
NGFYMGGCLF DNVTKDMRIY KEEIFGPVLS VVRAHDYAEA LALPSDHDYG NGVAIFTRDG
DAARDFAAKV NVGMVGINVP IPVPIAYYTF GGWKKSGFGD LNQHGPDSVR FYTKTKTVTS
RWPSGVKEGA EFSIPLMK
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