Gene Nwi_2159 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_2159 
Symbol 
ID3674577 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp2357220 
End bp2358752 
Gene Length1533 bp 
Protein Length510 aa 
Translation table11 
GC content63% 
IMG OID637713721 
Productmethylmalonate-semialdehyde dehydrogenase 
Protein accessionYP_318765 
Protein GI75676344 
COG category[C] Energy production and conversion 
COG ID[COG1012] NAD-dependent aldehyde dehydrogenases 
TIGRFAM ID[TIGR01722] methylmalonic acid semialdehyde dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.360109 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCCCAAC GGGACTATGC GAGCGAGCCG GAAGTAAACA TGCGCATCAT CGGGCACTTC 
ATCGGCGGCA GGAATGTCGA GGGCGCATCG GGACGTTTTT CAGATGTGTA TCAGCCGATG
ACGGGCGAGG TGCAGGCCAG GGTCGCACTG GCGTCGAAAG CCGAACTGCG CGAGGCCGTG
GAGAATGCCA GGGCGGCGCA GCCGGCCTGG GCGGCGACAA ACCCGCAGCG CCGCGTCCGC
GTGCTGATGA AGTTTCTCGA ACTGGTGGCG CGCGACAATG ATGCGATCGC CGAACTGCTC
GCCCGCGAAC ATGGCAAGAC CATTCCCGAT GCCCATGGCG ACATCTTCCG CGGCGTGGAG
GTTGTCGAAT ACGCCATCGG CATTCCCGAA CTGATGAAGG GCGACTTCAC CGAGAACGTC
GGTCCCGGCA TCGACAGCTA TTCGATGCGG CAGCCGCTCG GCGTCGTCGC CGGGATCACG
CCGTTCAATT TCCCGGCGAT GATCCCGATG TGGAAGTTCG CGCCGGCCAT CGCCTGCGGC
AACGCCTTCA TCCTGAAGCC GTCCGAACGC GATCCGGGCG TGCCGATGAG GCTGGCCGAA
TTGATGCTTG AGGCCGGTTT GCCGCCCGGC ATTCTCAATG TCGTCAACGG CGACAAGGAG
GTGGTGGACG CCATTCTTGA CGATCCCGAT ATCGCGGCGG TCGGCTTTGT CGGCTCCTCA
TCGGTCGCGC ATTACATTTA TTCTCGCGCC GCCGCGACGG GTAAAAGGTG CCAGTGCTTC
GGCGGCGCCA AGAATCACAT GATCATCATG CCCGACGCTG ATATGGATCA GTCGGTGGAG
GCGCTGGTCG GGGCGGGCTA TGGTGCGGCC GGTGAACGCT GCATGGCGGT GTCGGTCGCG
GTTCCCGTCG GCGAAGCCAC GGCCGACCGG CTGATGGAAA AGCTGATCCC GCGGGTGGGA
AGCCTGAAGA TTGGGCCGTC CACCGACGCG TCCGCCGATT TTGGTCCGCT CGTCACCAGG
GCGGCGCTGG AGCGTGTCAG GAATTATGTC GAGATCGGCG TCAAGGAAGG CGCCACGCTG
GCGGTCGATG GCCGCGGATT CAAAATGCAA GGCTACGAGA ACGGATTCTA CATGGGGGCC
AGTCTGTTCG ACAACGTTAC AAGGGACATG CGGATCTACA AGGAGGAGAT TTTTGGTCCG
GTGCTCTCGG TGGTGCGCGC GAAAGATTTC GAGGAAGCGG TGGCGCTGCC GTCCGAACAC
GACTACGGCA ACGGCGTTGC GATCTTCACG CGAGATGGTG ACGCCGCGCG CGAATTCGCC
TCGCGCGTCC AGGTCGGCAT GGTCGGCATC AATGTGCCGA TCCCGGTGCC GGTCGCCTAC
TACACCTTCG GCGGCTGGAA GCGCTCGGCC TTCGGTGACC TCAATCAGTA CGGTCCGGAT
TCAGTTCGAT TTTACACCAG GACCAAAACC GTCACCTCGC GCTGGCCCTC CGACGTCAAG
GAAGGGGCGC AGTTCGCGTT CCATAGCAAG TGA
 
Protein sequence
MSQRDYASEP EVNMRIIGHF IGGRNVEGAS GRFSDVYQPM TGEVQARVAL ASKAELREAV 
ENARAAQPAW AATNPQRRVR VLMKFLELVA RDNDAIAELL AREHGKTIPD AHGDIFRGVE
VVEYAIGIPE LMKGDFTENV GPGIDSYSMR QPLGVVAGIT PFNFPAMIPM WKFAPAIACG
NAFILKPSER DPGVPMRLAE LMLEAGLPPG ILNVVNGDKE VVDAILDDPD IAAVGFVGSS
SVAHYIYSRA AATGKRCQCF GGAKNHMIIM PDADMDQSVE ALVGAGYGAA GERCMAVSVA
VPVGEATADR LMEKLIPRVG SLKIGPSTDA SADFGPLVTR AALERVRNYV EIGVKEGATL
AVDGRGFKMQ GYENGFYMGA SLFDNVTRDM RIYKEEIFGP VLSVVRAKDF EEAVALPSEH
DYGNGVAIFT RDGDAAREFA SRVQVGMVGI NVPIPVPVAY YTFGGWKRSA FGDLNQYGPD
SVRFYTRTKT VTSRWPSDVK EGAQFAFHSK