| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_1113 |
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| Symbol | |
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| ID | 6115347 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 1430098 |
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| End bp | 1431588 |
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| Gene Length | 1491 bp |
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| Protein Length | 496 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 641632596 |
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| Product | methylmalonate-semialdehyde dehydrogenase |
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| Protein accession | YP_001759501 |
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| Protein GI | 170725475 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
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| TIGRFAM ID | [TIGR01722] methylmalonic acid semialdehyde dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0000656277 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAACAGA TCAACCACTA TATTAATGGC GCTCACACAG ATAAGAGTGA ACGCTCTAGC
CCAGTTTTTG AGCCTGCAAC AGGCGAGCCT AAAGCCAAAG TTTCATTGGC CAGTGCAGCT
GAAGTGGCTG GTGCTATCGA GCTGGCTAAA AAAGCACACA GCAGTTGGTC ACAAGTCTCT
CCCCTCAATC GTTCACGGGT TTTGTTTAAA TTTAAGGCCT TGGTTGAACA GAATATGGAT
GAGTTGGCAG AGCTCATTAC CCGCGAACAT GGCAAGGTTC TCGATGATGC TAAAGGCGAG
ATCATCCGTG GTCTTGAAGT GGTTGAGTTT GCCTGTGGTA TCCCTCACCT ATTAAAAGGT
GAACATACAG AGCAGGTTGG CGGCGGCGTT GATGCTTGGT GTGTGAATCA ATCTCTAGGT
GTGGTCGCAG GTATTGCCCC GTTTAACTTT CCGGTAATGG TGCCTATGTG GATGTTCCCT
ATCGCCATTG CAGCTGGTAA CACCTTTATC ATGAAGCCTT CAGAGAAAGA TCCAAGCTCA
GTGATGCGTA TGGCTCAGCT GCTCACCGAA GCGGGTCTTC CCGACGGCGT ATTTAACGTG
GTTAATGGCG ATAAAGAAGC GGTTGATACC CTACTGAGCC ATCCAGATAT TCATGCGGTT
AGCTTTGTCG GCTCAACACC GATTGCTGAA TATATCTATG AGACCGCCTC TAAGCATGGC
AAGCGCGTAC AAGCGCTCGG TGGTGCAAAA AATCATATGT TACTGATGCC TGATGCAGAT
ATCAATCAAG CAGTAGGTGC GCTAATGGGC GCGGCATTTG GCTCTGCTGG TGAGCGCTGC
ATGGCGATCT CAGTGGTACT TGCAGTGGGT GATTCTGGTG ATGCGCTCGT CGAGAAACTG
CTGCCTCAAA TTCAAGCTTT AAGAGTGGGT AACGGAGTGA CTCCAGAGAT GGATATGGGG
CCACTTATCT CAGCTCAACA CCTGGCCAAA GTCACCAGTT ATGTGGATAC AGGCGTTGCC
GAAGGAGCAA GTTTATTGGC CGATGGCCGC ACACTCAGTG TCGAAGATCA TGAGCAGGGT
TACTTCTTAG GTGGTTGCCT CTTTGACAAT GTCACCCCAG ATATGACCAT CTACAAGGAG
GAGATCTTCG GTCCTGTACT CGCTATCGTG CGAGTAAAAG ATTACGCCGA AGCCCTTGAG
CTTATCAATG CACATGAGTT CGGTAATGGC ACCGCTATCT TTACCCAAAG TGGTGAAGCC
GCTCGTCACT TCTGCCATCA CGTCCAAGTT GGAATGGTGG GAGTCAATGT TCCTATCCCG
GTGCCAATGG CATTTCACAG CTTTGGCGGC TGGAAACGTT CACTCTTTGG TCCACTACAT
ATGCATGGAC CAGACGGCGT CCGTTTCTAC ACTAAACGTA AGGCGATAAC CGCTCGCTGG
CCAAAATCGA GTGAGGCAAA AGCTGAGTTT GTGATGCCGA CAATGAAATA G
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| Protein sequence | MQQINHYING AHTDKSERSS PVFEPATGEP KAKVSLASAA EVAGAIELAK KAHSSWSQVS
PLNRSRVLFK FKALVEQNMD ELAELITREH GKVLDDAKGE IIRGLEVVEF ACGIPHLLKG
EHTEQVGGGV DAWCVNQSLG VVAGIAPFNF PVMVPMWMFP IAIAAGNTFI MKPSEKDPSS
VMRMAQLLTE AGLPDGVFNV VNGDKEAVDT LLSHPDIHAV SFVGSTPIAE YIYETASKHG
KRVQALGGAK NHMLLMPDAD INQAVGALMG AAFGSAGERC MAISVVLAVG DSGDALVEKL
LPQIQALRVG NGVTPEMDMG PLISAQHLAK VTSYVDTGVA EGASLLADGR TLSVEDHEQG
YFLGGCLFDN VTPDMTIYKE EIFGPVLAIV RVKDYAEALE LINAHEFGNG TAIFTQSGEA
ARHFCHHVQV GMVGVNVPIP VPMAFHSFGG WKRSLFGPLH MHGPDGVRFY TKRKAITARW
PKSSEAKAEF VMPTMK
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