| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_3801 |
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| Symbol | |
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| ID | 4686744 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | - |
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| Start bp | 4053155 |
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| End bp | 4054690 |
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| Gene Length | 1536 bp |
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| Protein Length | 511 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 639836819 |
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| Product | methylmalonate-semialdehyde dehydrogenase |
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| Protein accession | YP_984018 |
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| Protein GI | 121606689 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
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| TIGRFAM ID | [TIGR01722] methylmalonic acid semialdehyde dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.228893 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.75946 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTTCAT CGCCCGCCGA AATCGCTCCC CAGATCACCA TTGGCCACTA CCTGAACGGC
AGCGCTGTCA CGCCGGCCGC CGGGCGCAGC CAGGAGGTGT TCAATCCGGC CACCGGCGCG
GTCTCTGGCC ATGTGGCGCT GGGCAGCGCA GCCGATGTGG ATGTCGCCGT TGCCAGCGCG
CAGGCCGCCT TTCCGGCCTG GTCCGACATC CCGCCGATTC GCCGTGCCCG CGTCATGTTC
AAGTTCCTGG AACTGCTCAA CCAGAACAAG GACAAGCTCG CCCACCTGAT CACCGCCGAG
CACGGCAAGG TGTTCACCGA CGCGCAGGGC GAAGTCTCGC GTGGCATCGA CATCGTCGAA
TTCGCCTGCG GCATTCCGCA ACTGCTCAAG GGCGATTTCA CCGACCAGGT GTCAACCGGC
ATCGACAACT GGACGCTGCG CCAGCCGCTG GGCGTCGTGG CCGGCATCAC GCCGTTCAAC
TTTCCGGTCA TGGTGCCGAT GTGGATGTTC CCGGTGGCGA TTGCTGCGGG CAACTGCTTT
GTCCTCAAGC CCAGCCCGAT TGACCCGAGC GCCAGCCTCT TCATGGCTGA CTTGCTCAAA
CAGGCCGGTT TGCCCGACGG CGTGTTCAAC GTCGTGCAGG GCGACAAAGA AGCGGTCGAT
GCGCTGCTGG TGCATCCCGA TGTCAAGGCC GTGTCCTTCG TCGGCTCGAC ACCGATTGCC
AACTACATCT ATGAAACCGG CGCCCGCCAC GGCAAGCGCG TGCAGGCGCT GGGCGGCGCC
AAGAACCACA TGGTGGTCAT GCCCGACGCC GACCTGGAGC AGGCGGTCGA TGCGCTGATC
GGCGCGGGCT ACGGCTCGGC CGGCGAGCGC TGCATGGCGA TTTCGGTGGC GGTGCTGGTC
GGCGACGTGG CCGAAAAGCT CATTCCGATG CTCAAGGCCC GGGCCGAAAC GCTGGTGATC
AAGAACGGCG TGAACCTGGA TGCGGAAATG GGTCCGATCG TCACCGGCAT TGCGCACCAG
CGCATCACCG GCTACATCGA CCTGGGCGTT GAAGAGGGCG CCGAGCTGCT GGTCGATGGC
CGCACCTTCA CTGGCGCGCA AGCGGGCGAG GGCTGCGCGC AGGGTTTCTG GATGGGTGGC
ACGCTGTTTG ACCATGTCAC GCCCGACATG CGCATCTACA AGGAAGAAAT CTTCGGCCCG
GTGCTGGGCT GCGTGCGGGT GAACGATTTG GCCGAAGCGG TCGAGTTGAT CAACGCCCAC
GAGTTTGGCA ACGGCGTGAG CTGCTTCACC CGCGACGGCC ATGTGGCACG CGAATTCAGC
CGCCGCATCC AGGTCGGCAT GGTCGGCATC AATGTGCCGA TTCCGGTGCC CATGGCCTGG
CACGGCTTTG GCGGCTGGAA GAAGAGCCTG TTCGGCGACA TGCACGCCTA CGGCGAGGAA
GGCGTGCGCT TCTACACGAA GCAAAAATCC ATCATGCAGC GCTGGCCAGA AAGCATTGGC
AAAGGCGCCG AGTTCGTGAT GCCGACAGCG AAATAA
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| Protein sequence | MFSSPAEIAP QITIGHYLNG SAVTPAAGRS QEVFNPATGA VSGHVALGSA ADVDVAVASA
QAAFPAWSDI PPIRRARVMF KFLELLNQNK DKLAHLITAE HGKVFTDAQG EVSRGIDIVE
FACGIPQLLK GDFTDQVSTG IDNWTLRQPL GVVAGITPFN FPVMVPMWMF PVAIAAGNCF
VLKPSPIDPS ASLFMADLLK QAGLPDGVFN VVQGDKEAVD ALLVHPDVKA VSFVGSTPIA
NYIYETGARH GKRVQALGGA KNHMVVMPDA DLEQAVDALI GAGYGSAGER CMAISVAVLV
GDVAEKLIPM LKARAETLVI KNGVNLDAEM GPIVTGIAHQ RITGYIDLGV EEGAELLVDG
RTFTGAQAGE GCAQGFWMGG TLFDHVTPDM RIYKEEIFGP VLGCVRVNDL AEAVELINAH
EFGNGVSCFT RDGHVAREFS RRIQVGMVGI NVPIPVPMAW HGFGGWKKSL FGDMHAYGEE
GVRFYTKQKS IMQRWPESIG KGAEFVMPTA K
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