Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_4274 |
Symbol | |
ID | 6285772 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010678 |
Strand | + |
Start bp | 570275 |
End bp | 571798 |
Gene Length | 1524 bp |
Protein Length | 507 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642618757 |
Product | methylmalonate-semialdehyde dehydrogenase |
Protein accession | YP_001892798 |
Protein GI | 187926453 |
COG category | [C] Energy production and conversion |
COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
TIGRFAM ID | [TIGR01722] methylmalonic acid semialdehyde dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.463031 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 0.914985 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACCGAC CGATTGATCC CGCCGTGACC GAATCCGTTG TCAGCCATTA CATCGGCGGG CAGCGCCATG CCGGCAGCGG CACACGCAGC GCCGATGTCT TCAACCCCGC TACGGGCGCG GTGAGCGCGC AGGTGCTGCT GGGCGGCAAA TCCGAAGTGG ACGCCGCCGT AGCCGCCGCG CATGCGGCTG CCCCGGACTG GGCCGAGACT TCGCCGCTCA AGCGCTCGCG CGTTTTGTTC AAGTTCAAGG AGCTGCTCGA CCAGAACCAC GATGCTCTGG CCGCCGCCAT TACGCGTGAG CACGGCAAGG TGTTCTCCGA TGCCAAAGGC GAAGTGACGC GCGGCATTGA AGTCGTCGAA TTCGCCTGCG GCATTCCGAA CCTGCTCAAG ACGGAGTTCA CGGACAACAT CGGCGGCGGC ATCGACAACT GGAACCTGCG CCAGCCGCTG GGCGTGGTGG CCGGCATTAC GCCGTTCAAC TTCCCGTTCA TGGTGCCGAT GTGGATGGCG CCGGTTGCGC TGGCGTGCGG CAATACGTTC ATCCTCAAGC CCAGCGAACG TGACCCGACC CCCAGCCTGA TGATTGCCGA CCTGCTCAAG CAGGCGGGCC TTCCCGATGG TGTGTTCAAC GTGGTACAGG GTGGCAAGGA TGCCGTTGAT GCGCTGCTCG AGCATCCGGA TGTGCAGGCC ATTTCGTTCG TCGGCAGCAC GCCCATCGCC GAATACATCT ACGCCGAAGG CACCAAGCGC GGCAAGCGCG TGCAAGCCCT GGGCGGCGCA AAGAATCACC TCGTCGTCAT GCCGGATGCA GACCTCGACC AAGCGGTGGA TGCCTTGATC GGTGCAGGCT ACGGTTCGGC CGGTGAGCGC TGCATGGCGA TCTCCGTGGC TGTGGCAGTG GGCGACGTGG CTGACAAGCT CGTCCCGCGC CTTGCCGAGC GCGCCCGCGC GCTCAAGATC GGCAACGGCA TGCAGGCCGA CAGCGAAATG GGTCCACTTG TGACCGCCGC CCACAAGGCC AAGGTGGAAG GCTATATCGC CAAGGGCGTG GAAGAGGGCG CCGAGCTGGT CGTGGACGGC CGCGGCCACA CGGTCGACGG CCATGCCGAA GGCTTCTTCA CGGGCGGCAC GCTGTTCGAC CACGTCAAGC CCGGGATGAC GATCTACAAG GAAGAGATCT TCGGCCCCGT GCTTTCGGTG GTGCGCGTGC ATGACCTTGC CGAGGCGGTG GATCTGATCA ATGCGCATGA GTTCGGCAAC GGCGTGTCGT GCTACACGAG CGATGGCGGC GTGGCGCGCG CATTTGCGCG GCAGATCCAG GTGGGCATGG TCGGTATCAA TGTGCCGATT CCGGTGCCGA TGGCGTGGCA TAGCTTCGGC GGCTGGAAGC GCTCGCTGTT CGGCGACCAC CACGCCTATG GCGAAGAAGG CGTGCGTTTC TACACGCGTT ACAAGAGCGT GATGCAACGC TGGCCGGATT CGATTGCCAA GGGCGCCGAG TTCGTGATGC CGACAGCCAA GTAA
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Protein sequence | MNRPIDPAVT ESVVSHYIGG QRHAGSGTRS ADVFNPATGA VSAQVLLGGK SEVDAAVAAA HAAAPDWAET SPLKRSRVLF KFKELLDQNH DALAAAITRE HGKVFSDAKG EVTRGIEVVE FACGIPNLLK TEFTDNIGGG IDNWNLRQPL GVVAGITPFN FPFMVPMWMA PVALACGNTF ILKPSERDPT PSLMIADLLK QAGLPDGVFN VVQGGKDAVD ALLEHPDVQA ISFVGSTPIA EYIYAEGTKR GKRVQALGGA KNHLVVMPDA DLDQAVDALI GAGYGSAGER CMAISVAVAV GDVADKLVPR LAERARALKI GNGMQADSEM GPLVTAAHKA KVEGYIAKGV EEGAELVVDG RGHTVDGHAE GFFTGGTLFD HVKPGMTIYK EEIFGPVLSV VRVHDLAEAV DLINAHEFGN GVSCYTSDGG VARAFARQIQ VGMVGINVPI PVPMAWHSFG GWKRSLFGDH HAYGEEGVRF YTRYKSVMQR WPDSIAKGAE FVMPTAK
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