| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_2368 |
|---|
| Symbol | |
|---|
| ID | 8535532 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halothiobacillus neapolitanus c2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013422 |
|---|
| Strand | + |
|---|
| Start bp | 2532705 |
|---|
| End bp | 2534219 |
|---|
| Gene Length | 1515 bp |
|---|
| Protein Length | 504 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 646384742 |
|---|
| Product | methylmalonate-semialdehyde dehydrogenase |
|---|
| Protein accession | YP_003264224 |
|---|
| Protein GI | 261856941 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
|---|
| TIGRFAM ID | [TIGR01722] methylmalonic acid semialdehyde dehydrogenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCTCGC CGGAACACAC CCTGCCGATG ATCGGCCACT ACATTAATGG TCAGCACATC
GCGGGCAACG GCGAGCAAAA AGCCGATGTG TTCAATCCCG CTACCGGCGC GGTTCAGGCA
CAGGTTTGCT TCGCCACGGA ATCGGAAGTT CAGCAAGCCA TCGCGGCGGC GGCCGAAGCC
TTCCCGGCGT GGTCGGCCAC CTCGCCGCTC AAGCGTGCAC GGATCATGTT TACGTTCCGG
GAATTGCTTG AGAAAAACAG CGCGGCACTG GCGCGCGCCA TCACGCTGGA ACACGGCAAG
ACCCTCAGCG ATGCGCACGG CGAAATTACC CGTGGTCTCG AAGTGGTCGA GTTCGCCTGC
GGCATGCCGC ACCTGCTCAA GGGCGAGTTC AGCGATCAGG TGGGTACCGG CATCGATACC
CACAGCCTGC GCCAACCGCT CGGCGTCGTG GCGGGCATCA CGCCGTTCAA CTTTCCGGTC
ATGGTGCCAC TGTGGATGAT CCCGATGGCG CTGGCGACCG GCAATACCTT CGTCCTCAAG
CCGTCGGAGC GCGATCCGAG CGCCAGCCTG ATGCTGGCCG ACCTGCTCGC GCAGGCAGGG
TTGCCGAGCG GTGTGTTCAA CGTGGTTCAG GGCGACAAAC TGGCGGTGGA TACCCTGCTG
ACCGACAAGC GGGTGCAGGC GATCAGCTTT GTCGGCTCAA CGCCCATCGC GGAATATATC
TACACCACGG GCACGGCGAA CGGCAAACGG GTGCAGGCTC TGGGTGGCGC GAAGAATCAC
CTCGTGGTCA TGCCCGATGC GGATCTCGAT CAGGTTGCCG ATGCGCTGAT CGGTGCGGGT
TTCGGTTCTG CGGGGGAACG CTGCATGGCC ATCACGGTGG CGGTTGCCGT GGGCGGTGTC
GGCGAAGCGC TGGTGGACAA ACTCGCAAAC AAAGCGCGCA GCATTCGCGT CGGCCAGGGG
CTGGATGAAA ACGCCGATAT GGGTCCGCTC GTTACGCCGC AGCATTATGC GAAGGTCAAA
TCTTATGTGG ATTGTGGCGT GCAGGAAGGC GCCAAGCTTG TGGTGGATGG TCGCGACTTC
AAACTGCCGG GCTTTGATAA CGGGTTCTTC ATCGGCCCTT GCCTGTTCGA TCAGGTCACG
CCGGACATGA CCATCTACAA GGAAGAAATT TTCGGCCCCG TGCTGTCCGT CATGCACGTC
AGCGATTTCG AAACCGCACT GAAACTGGTC AATGACCACG AGTACGGCAA CGGCACGGCC
ATCTTCACCC GCGACGGCGG TGTGGCGCGC GAGTTTTCCC GCCGCGTGCA GGCGGGCATG
GTGGGCATTA ACGTACCGAT CCCGGTGCCG ATTGCCTTCC ACAGCTTCGG CGGCTGGAAA
CGCTCGCTGT TCGGCGATCA CCACATCTAT GGCCCGGAAG GTGTCCGGTT CTACACCCGC
ATCAAGACCA CAACGACGCG CTGGCCTGCG GGAGCACCGC TTGCCGCAGA ATTTGTCCTA
CCGACGATGA AGTAA
|
|---|
| Protein sequence | MTSPEHTLPM IGHYINGQHI AGNGEQKADV FNPATGAVQA QVCFATESEV QQAIAAAAEA
FPAWSATSPL KRARIMFTFR ELLEKNSAAL ARAITLEHGK TLSDAHGEIT RGLEVVEFAC
GMPHLLKGEF SDQVGTGIDT HSLRQPLGVV AGITPFNFPV MVPLWMIPMA LATGNTFVLK
PSERDPSASL MLADLLAQAG LPSGVFNVVQ GDKLAVDTLL TDKRVQAISF VGSTPIAEYI
YTTGTANGKR VQALGGAKNH LVVMPDADLD QVADALIGAG FGSAGERCMA ITVAVAVGGV
GEALVDKLAN KARSIRVGQG LDENADMGPL VTPQHYAKVK SYVDCGVQEG AKLVVDGRDF
KLPGFDNGFF IGPCLFDQVT PDMTIYKEEI FGPVLSVMHV SDFETALKLV NDHEYGNGTA
IFTRDGGVAR EFSRRVQAGM VGINVPIPVP IAFHSFGGWK RSLFGDHHIY GPEGVRFYTR
IKTTTTRWPA GAPLAAEFVL PTMK
|
|---|
| |