| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_1083 |
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| Symbol | |
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| ID | 5081691 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | - |
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| Start bp | 1214091 |
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| End bp | 1215581 |
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| Gene Length | 1491 bp |
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| Protein Length | 496 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640498213 |
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| Product | methylmalonate-semialdehyde dehydrogenase |
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| Protein accession | YP_001182610 |
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| Protein GI | 146292186 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
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| TIGRFAM ID | [TIGR01722] methylmalonic acid semialdehyde dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0000148294 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTCAAGA TCACTCATTT TGTTAATGGT CAGCACACCC CTGCCAGTAT AAGAACCCAA
GATATTTTTG AACCCGCCAC GGGTGAGCTA CGTGGCCAAG TCTCACTGGC AAGCGAAACC
GAAGTCGGCG AAGCTATCGC AATCGCTAAA ACCGCCTTTG AAACCTGGTC ACAAGTCACG
CCGCTCAACC GTGCTCGAGT GCTTTTTAAA TTCAAAGCCT TAGTCGAGCA GCACCTAGAT
GAAATGGCGC AGCTTATCAC CCGTGAGCAC GGCAAAGTGA TCGACGATGC TAAGGGCGAG
TTGATCCGCG GTCTCGAAGT GGTCGAATTT GCCTGTGGTA TTCCGCACTT GCTTAAAGGT
GAACACACCC AGCAAGTGGG TGGCGGCGTC GATTCTTGGT CAGTTAATCA AGCTTTAGGT
GTTGTCGCAG GCATAGCGCC CTTTAACTTC CCCGTGATGG TTCCCATGTG GATGTTCCCA
ATCGCGATTG CCTGCGGTAA CACCTTTATT ATGAAACCCT CGGAAAAAGA CCCGAGCTCA
GTGATGCGTA TTGCCGAGCT GCTTAAAGAA GCGGGTCTTC CCGATGGCGT GTTTAACGTG
ATTAACGGCG ACAAAGAAGC CGTCGATACC TTACTCACCC ATAAAGATGT GCAAGCGGTG
AGCTTTGTAG GCTCAACGCC GATTGCTGAA TACATCTACA GCACAGCCTC TAAACATGGC
AAACGCGTGC AAGCCTTAGG CGGCGCGAAA AACCATATGT TACTCATGCC AGATGCAGAT
TTAGATCAAG CCGTTAGCGC CTTAATGGGT GCCGCTTACG GCAGTGCTGG TGAGCGTTGT
ATGGCAATTT CAGTCGTACT CGCGGTAGGC GATGTGGGCG ACGCGTTAGT GGAAAAACTG
CTACCGCAAA TCCAAACCTT AAAAGTCGGC AACGGCCTGA CGCCAGAGAT GGAAATGGGC
CCGCTGATCT CAAAACAGCA CCTTGCCAAA GTCACCCAAT ATGTTGAAGC CGGTGTGCAA
GAAGGTGCAG CGCTGCTGGT CGATGGCCGT AAACTGAGTG TTGAAGAAAA TCCACAGGGT
TATTTCCTCG GCGCCTGTTT GTTCGACCAT GTCACGCCTG AAATGAGCAT CTACCGCGAA
GAAATCTTTG GCCCAGTGCT GGCGATTGTG CGCGTGAAAG ATTACCCAAC GGCGCTTGAG
CTGATTAACC GACACGAATT TGGCAATGGC ACGGCGATTT TCACCCAAAG TGGTGAAGCG
GCAAGGCATT TCTGTCACCA CGTGCAAGTC GGTATGGTTG GAGTGAATGT ACCGATCCCA
GTGCCGATGG CGTTCCACAG TTTTGGCGGT TGGAAGCGTT CACTGTTTGG GCCGCTGCAT
ATGCATGGCC CCGATGGCGT GCGTTTTTAT ACCAAGCGTA AGGCAATTAC TGCCCGCTGG
CCTGTGGGTA AACAGACTCA AGCCGAGTTT GTGATGCCAA CGATGAAATA G
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| Protein sequence | MLKITHFVNG QHTPASIRTQ DIFEPATGEL RGQVSLASET EVGEAIAIAK TAFETWSQVT
PLNRARVLFK FKALVEQHLD EMAQLITREH GKVIDDAKGE LIRGLEVVEF ACGIPHLLKG
EHTQQVGGGV DSWSVNQALG VVAGIAPFNF PVMVPMWMFP IAIACGNTFI MKPSEKDPSS
VMRIAELLKE AGLPDGVFNV INGDKEAVDT LLTHKDVQAV SFVGSTPIAE YIYSTASKHG
KRVQALGGAK NHMLLMPDAD LDQAVSALMG AAYGSAGERC MAISVVLAVG DVGDALVEKL
LPQIQTLKVG NGLTPEMEMG PLISKQHLAK VTQYVEAGVQ EGAALLVDGR KLSVEENPQG
YFLGACLFDH VTPEMSIYRE EIFGPVLAIV RVKDYPTALE LINRHEFGNG TAIFTQSGEA
ARHFCHHVQV GMVGVNVPIP VPMAFHSFGG WKRSLFGPLH MHGPDGVRFY TKRKAITARW
PVGKQTQAEF VMPTMK
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