| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_3095 |
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| Symbol | |
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| ID | 3974046 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 3436151 |
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| End bp | 3437647 |
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| Gene Length | 1497 bp |
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| Protein Length | 498 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637926203 |
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| Product | methylmalonate-semialdehyde dehydrogenase |
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| Protein accession | YP_532956 |
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| Protein GI | 90424586 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
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| TIGRFAM ID | [TIGR01722] methylmalonic acid semialdehyde dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.769898 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.126836 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCTCAA TCGGGCATTT TATCGCTGGC CGCGAGGTTG CTGGAACGTC GGGTCGGTTT
GCCGACGTGT TCGAACCGAT GACCGGCGAG GTGCAGGCGC AGGTTGCGCT CGCGACCAAA
GCCGAGCTGC GCGCCGCGGT GGAAGATGCC AAGCAAGCGC AGCTGGCGTG GGGCGCCACC
AACCCGCAGC GTCGCGCCCG GGTGATGATG AAATTCCTCG AGTTGGCGCA GCGCGACTAC
GACAAGCTCG CCGAGTTGCT CGCCAGCGAG CACGGCAAGA CCGTGCCGGA CGCCAAGGGT
GACATCCAGC GCGGCCTCGA AGTGGTGGAA TTCGCCTGCG GCATTCCGCA CCTGATGAAG
GGCGAATACA CCGAAGGCGC CGGCCCCGGC ATCGACATCT ATTCGATGCG GCAGCCGCTC
GGCGTGGTCG CCGGCATCAC CCCGTTCAAT TTCCCGGCGA TGATCCCGAT GTGGAAATTC
GCCCCGGCGA TCGCCTGCGG CAACGCCTTC ATCCTCAAGC CCTCGGAGCG CGACCCCGGG
GTTCCGATGG CGCTCGCCGC GTTGATGATC GAGGCCGGAT TGCCGCCGGG CATCCTCAAC
GTCGTCAACG GCGACAAAGA GGCGGTCGAC GCCATCCTGG ACGACCCGGA TATTCGCGCG
GTCGGCTTCG TCGGTTCCTC GCCGATCGCG CAATACATCT ATGAGCGGGC GGCGGCGACC
GGCAAGCGCG CGCAATGCTT CGGCGGCGCC AAGAACCACG CCATCATCAT GCCCGACGCC
GATCTCGACC ACACCGTCGA CGCCCTGATC GGCGCCGGCT ACGGCTCCGC CGGCGAGCGC
TGCATGGCGA TCTCGGTCGC GGTGCCGGTC GGCAAGGCCA CCGCCGACGC GCTGATGGAG
AAGCTGATCC CGCGGGTCGA GGCGCTGAAG ATCGGGCCGT CCACCGATCC GTCGGCCGAT
TTTGGCCCGC TGGTGACCAA GGCGGCGCTG CAGCGCGTCA AGGACTACGT CAAGGTCGGG
ATCGAGGAGG GCGCGACGCT CGCGGTCGAC GGCCGCGACT TCACGCTTCA GGGCTATGAG
AACGGCTTCT ATATGGGCGG CTGCCTGTTC GACAACGTCA CCAAAGACAT GCGGATCTAC
AAAGAGGAGA TTTTTGGACC CGTGCTGAGC GTGGTCCGTG CGCACGACTA CGCCGAAGCG
CTGGCGCTGC CGTCCGACCA CGACTACGGC AATGGCGTTG CGATCTTCAC CCGCGACGGC
GACGCCGCGC GCGACTTCGC CGCCAAGGTG AATGTCGGCA TGGTCGGTAT CAACGTGCCG
ATCCCGGTGC CGATCGCCTA CTACACCTTC GGCGGCTGGA AGAAATCCGG CTTCGGCGAT
CTCAACCAGC ACGGCCCGGA TTCTATTCGC TTCTACACCA AGACCAAGAC CGTCACCGCG
CGCTGGCCAA GCGGCGTCAA AGAAGGCGCC GAATTCTCGA TCCCGACGAT GAAGTGA
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| Protein sequence | MRSIGHFIAG REVAGTSGRF ADVFEPMTGE VQAQVALATK AELRAAVEDA KQAQLAWGAT
NPQRRARVMM KFLELAQRDY DKLAELLASE HGKTVPDAKG DIQRGLEVVE FACGIPHLMK
GEYTEGAGPG IDIYSMRQPL GVVAGITPFN FPAMIPMWKF APAIACGNAF ILKPSERDPG
VPMALAALMI EAGLPPGILN VVNGDKEAVD AILDDPDIRA VGFVGSSPIA QYIYERAAAT
GKRAQCFGGA KNHAIIMPDA DLDHTVDALI GAGYGSAGER CMAISVAVPV GKATADALME
KLIPRVEALK IGPSTDPSAD FGPLVTKAAL QRVKDYVKVG IEEGATLAVD GRDFTLQGYE
NGFYMGGCLF DNVTKDMRIY KEEIFGPVLS VVRAHDYAEA LALPSDHDYG NGVAIFTRDG
DAARDFAAKV NVGMVGINVP IPVPIAYYTF GGWKKSGFGD LNQHGPDSIR FYTKTKTVTA
RWPSGVKEGA EFSIPTMK
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