| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_0836 |
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| Symbol | mmsA |
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| ID | 7386316 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 717850 |
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| End bp | 719346 |
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| Gene Length | 1497 bp |
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| Protein Length | 498 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 643650388 |
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| Product | methylmalonate-semialdehyde dehydrogenase |
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| Protein accession | YP_002548597 |
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| Protein GI | 222147640 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
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| TIGRFAM ID | [TIGR01722] methylmalonic acid semialdehyde dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTATCAGA TCGGGCATTT TATTGGCGGC AAGGCCGTGG CTGGCACCTC TGGCCGCAAG
CAGCCGATTT TCAATCCGGC AACCGGTGAA GTGCAGGGCG AAATCTCGCT AGCCAGCGCA
GACGAGCTGA ATGCAGCGGT GGAAAACGCC AAGGCCGCCC AGCCAAAATG GGCCGCCACC
AATCCGCAGC GCCGCGCCCG CGTGTTCATG AAGTTCGTGG AATTGCTCAA CACCCATATG
GACGAGCTGG CCGAAATGCT GTCGCGTGAA CATGGCAAGA CCATTGAAGA CGCCAAGGGC
GATATCGTCC GTGGTCTGGA AGTCTGCGAA TTCGTCATCG GCATTCCGCA TCTGTCGAAG
AGCGAGTTTA CCGAAGGCGC AGGCCCGAAC ATTGATATGT ATTCCATCCG CCAGGCTGTC
GGCGTTGGCG CTGGCATTAC GCCGTTCAAT TTCCCGGCGA TGATTCCGAT GTGGATGTTT
GCCCCGGCCA TCGCTTGCGG CAATGCCTTT ATCCTCAAGC CTTCCGAGCG CGATCCGTCA
GTGCCGATGC GTCTTGCCGA ACTGATGATT GAAGCGGGCT TGCCTGCTGG CATTCTGAAC
GTCGTCAATG GCGATAAATC AGCTGTCGAT GGCCTGCTGA CTCATCCCGA TATCGGTGCA
ATTTCCTTCG TGGGCTCCAC CCCGATTGCC CGTTATGTTT ATGGCACGGC AGCAGCCAAC
GGCAAGCGCG CCCAATGCTT TGGCGGCGCC AAGAACCACA TGATCATCAT GCCCGATGCC
GATCTGGATC AGGCCGCCAA TGCGCTGATG GGCGCGGGCT ATGGTTCGGC CGGGGAACGC
TGCATGGCGA TTTCGGTGGC CGTTCCTGTT GGTGATGAAA CCGCTGATCG CCTGATTGCC
AAGCTGACCC CGATGATCGA GAGCCTGCGC ATTGGCCCTT ATACCGATGA CAAGGCCGAT
ATGGGTCCTG TCATTACCAA GGAAGCCCGC GACCGCATTC TGGGTCTGAT CGACAGTGGC
GTCGAAGCCG GTGCCAAGCT GGTCGTCGAT GGCCGTGACT TCAAGCTTCA GGGCTATGAA
AACGGCAATT TCGTCGGTGG CTGCCTGTTC GACAACGTTA CCCCGGATAT GGACATCTAC
AAGACCGAAA TCTTCGGACC GGTTCTCTCG GTAGTGCGCG CGAAAAACTA TGAAGAAGCG
CTCGATCTGC CGATGAAGCA TGAATATGGC AATGGCGTTG CGATCTATAC CCGCGACGGC
GATGCGGCGC GTGATTTTGC CAGCCGCATC AATATCGGCA TGGTCGGCAT CAATGTGCCG
ATTCCGGTGC CGCTGGCCTA CCACTCCTTC GGCGGTTGGA AGGCGTCTTC CTTCGGCGAC
CTCAACCAGC ATGGTACGGA CTCGATCAAA TTCTGGACCC GCACCAAGAC CGTCACCAGC
CGCTGGCCTT CCGGCATCAA GGATGGCGCT GAATTCGTTA TGCCGACGAT GAAATGA
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| Protein sequence | MYQIGHFIGG KAVAGTSGRK QPIFNPATGE VQGEISLASA DELNAAVENA KAAQPKWAAT
NPQRRARVFM KFVELLNTHM DELAEMLSRE HGKTIEDAKG DIVRGLEVCE FVIGIPHLSK
SEFTEGAGPN IDMYSIRQAV GVGAGITPFN FPAMIPMWMF APAIACGNAF ILKPSERDPS
VPMRLAELMI EAGLPAGILN VVNGDKSAVD GLLTHPDIGA ISFVGSTPIA RYVYGTAAAN
GKRAQCFGGA KNHMIIMPDA DLDQAANALM GAGYGSAGER CMAISVAVPV GDETADRLIA
KLTPMIESLR IGPYTDDKAD MGPVITKEAR DRILGLIDSG VEAGAKLVVD GRDFKLQGYE
NGNFVGGCLF DNVTPDMDIY KTEIFGPVLS VVRAKNYEEA LDLPMKHEYG NGVAIYTRDG
DAARDFASRI NIGMVGINVP IPVPLAYHSF GGWKASSFGD LNQHGTDSIK FWTRTKTVTS
RWPSGIKDGA EFVMPTMK
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