More than 300 homologs were found in PanDaTox collection
for query gene Rru_A1401 on replicon NC_007643
Organism: Rhodospirillum rubrum ATCC 11170



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007643  Rru_A1401  chemotaxis sensory transducer  100 
 
 
569 aa  1130    Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_007643  Rru_A1404  chemotaxis sensory transducer  59.09 
 
 
611 aa  605  9.999999999999999e-173  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.011031  n/a   
 
 
-
 
NC_010338  Caul_0614  methyl-accepting chemotaxis sensory transducer  56.77 
 
 
560 aa  563  1.0000000000000001e-159  Caulobacter sp. K31  Bacteria  normal  normal 
 
 
-
 
NC_012850  Rleg_3561  methyl-accepting chemotaxis sensory transducer  55.01 
 
 
569 aa  521  1e-146  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.216373 
 
 
-
 
NC_011369  Rleg2_3262  methyl-accepting chemotaxis sensory transducer  53.2 
 
 
569 aa  502  1e-141  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.846629 
 
 
-
 
NC_011989  Avi_4314  methyl-accepting chemotaxis protein  53.17 
 
 
564 aa  495  9.999999999999999e-139  Agrobacterium vitis S4  Bacteria  normal  0.77703  n/a   
 
 
-
 
NC_010338  Caul_0615  methyl-accepting chemotaxis sensory transducer  51.64 
 
 
599 aa  485  1e-135  Caulobacter sp. K31  Bacteria  normal  normal 
 
 
-
 
NC_007643  Rru_A1403  methyl-accepting chemotaxis sensory transducer  80.87 
 
 
637 aa  481  1e-134  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_011369  Rleg2_3260  methyl-accepting chemotaxis sensory transducer  51.15 
 
 
602 aa  466  9.999999999999999e-131  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.0582253  normal  0.204929 
 
 
-
 
NC_012850  Rleg_3559  methyl-accepting chemotaxis sensory transducer  51.39 
 
 
602 aa  461  9.999999999999999e-129  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.495549  normal  0.432808 
 
 
-
 
NC_009485  BBta_6735  methyl-accepting chemotaxis receptor (MCP)  54.41 
 
 
566 aa  456  1e-127  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.0787905  normal 
 
 
-
 
NC_011989  Avi_4312  methyl-accepting chemotaxis protein  47.05 
 
 
606 aa  436  1e-121  Agrobacterium vitis S4  Bacteria  normal  0.623028  n/a   
 
 
-
 
NC_010510  Mrad2831_5777  methyl-accepting chemotaxis sensory transducer  63.03 
 
 
705 aa  435  1e-120  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.807181  normal  0.137814 
 
 
-
 
NC_007925  RPC_4671  methyl-accepting chemotaxis sensory transducer  57.93 
 
 
691 aa  427  1e-118  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_7836  methyl-accepting chemotaxis receptor (MCP)  47.52 
 
 
609 aa  420  1e-116  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.518607  normal  0.95176 
 
 
-
 
NC_009428  Rsph17025_1046  methyl-accepting chemotaxis sensory transducer  46.53 
 
 
551 aa  413  1e-114  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_6733  putative methyl-accepting chemotaxis protein  54.64 
 
 
738 aa  411  1e-113  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.556647  normal 
 
 
-
 
NC_007925  RPC_4672  methyl-accepting chemotaxis sensory transducer  57.83 
 
 
693 aa  404  1e-111  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_7837  putative methyl-accepting chemotaxis protein (MCP)  59.95 
 
 
702 aa  400  9.999999999999999e-111  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_010505  Mrad2831_4817  methyl-accepting chemotaxis sensory transducer  59.38 
 
 
747 aa  392  1e-108  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  hitchhiker  0.00849638 
 
 
-
 
NC_012850  Rleg_3560  methyl-accepting chemotaxis sensory transducer  67.71 
 
 
640 aa  390  1e-107  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.521589  normal  0.347271 
 
 
-
 
NC_007925  RPC_4674  methyl-accepting chemotaxis sensory transducer  51.43 
 
 
734 aa  386  1e-106  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_011369  Rleg2_3261  methyl-accepting chemotaxis sensory transducer  67.53 
 
 
640 aa  385  1e-105  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.444549 
 
 
-
 
NC_011004  Rpal_0142  methyl-accepting chemotaxis sensory transducer  56.47 
 
 
733 aa  384  1e-105  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.134985  n/a   
 
 
-
 
NC_011981  Avi_7320  methyl-accepting chemotaxis protein  63.84 
 
 
774 aa  381  1e-104  Agrobacterium vitis S4  Bacteria  normal  0.364364  n/a   
 
 
-
 
NC_013173  Dbac_1421  methyl-accepting chemotaxis sensory transducer  53.77 
 
 
676 aa  372  1e-102  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.45919  n/a   
 
 
-
 
NC_008609  Ppro_1608  methyl-accepting chemotaxis sensory transducer  42.49 
 
 
558 aa  371  1e-101  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_011989  Avi_3947  methyl-accepting chemotaxis protein  62.54 
 
 
619 aa  366  1e-100  Agrobacterium vitis S4  Bacteria  normal  0.412994  n/a   
 
 
-
 
NC_009485  BBta_6734  methyl-accepting chemotaxis receptor (MCP)  61.66 
 
 
650 aa  367  1e-100  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.221073  normal 
 
 
-
 
NC_013173  Dbac_1917  methyl-accepting chemotaxis sensory transducer  51.34 
 
 
677 aa  365  1e-99  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.134066  n/a   
 
 
-
 
NC_011989  Avi_4313  methyl-accepting chemotaxis protein  65.49 
 
 
642 aa  365  1e-99  Agrobacterium vitis S4  Bacteria  normal  0.7654  n/a   
 
 
-
 
NC_009483  Gura_2985  methyl-accepting chemotaxis sensory transducer  43.03 
 
 
576 aa  365  1e-99  Geobacter uraniireducens Rf4  Bacteria  normal  0.293775  n/a   
 
 
-
 
NC_009050  Rsph17029_3443  methyl-accepting chemotaxis sensory transducer  44.95 
 
 
553 aa  365  2e-99  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal  0.0628443 
 
 
-
 
NC_007494  RSP_3708  methyl accepting chemotaxis protein  44.75 
 
 
553 aa  364  2e-99  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_009429  Rsph17025_3251  hypothetical protein  42.54 
 
 
552 aa  364  2e-99  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.367816  normal  0.217501 
 
 
-
 
NC_013173  Dbac_2647  methyl-accepting chemotaxis sensory transducer  41.14 
 
 
554 aa  363  5.0000000000000005e-99  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.910941  n/a   
 
 
-
 
NC_012918  GM21_1105  methyl-accepting chemotaxis sensory transducer  44.33 
 
 
563 aa  361  2e-98  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_007493  RSP_2442  methyl accepting chemotaxis protein, McpB  45.12 
 
 
560 aa  358  1.9999999999999998e-97  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.648609  n/a   
 
 
-
 
NC_009049  Rsph17029_1106  methyl-accepting chemotaxis sensory transducer  45.12 
 
 
560 aa  358  1.9999999999999998e-97  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal  0.809659 
 
 
-
 
NC_009483  Gura_2779  methyl-accepting chemotaxis sensory transducer  53.54 
 
 
566 aa  355  1e-96  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU1304  methyl-accepting chemotaxis protein  52.64 
 
 
566 aa  351  2e-95  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_007925  RPC_4673  methyl-accepting chemotaxis sensory transducer  61.41 
 
 
640 aa  350  3e-95  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_007494  RSP_3083  methyl accepting chemotaxis protein  40.38 
 
 
561 aa  350  5e-95  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.481742  n/a   
 
 
-
 
NC_009050  Rsph17029_3810  methyl-accepting chemotaxis sensory transducer  40.85 
 
 
561 aa  349  6e-95  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal  0.296432 
 
 
-
 
NC_002939  GSU1300  methyl-accepting chemotaxis protein  52.64 
 
 
563 aa  348  1e-94  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU0683  methyl-accepting chemotaxis protein, putative  42.29 
 
 
568 aa  347  3e-94  Geobacter sulfurreducens PCA  Bacteria  normal  0.268569  n/a   
 
 
-
 
NC_009431  Rsph17025_4246  hypothetical protein  42.66 
 
 
562 aa  347  5e-94  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.2464  normal  0.120296 
 
 
-
 
NC_007517  Gmet_2424  methyl-accepting chemotaxis sensory transducer  52.71 
 
 
581 aa  344  2e-93  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_007494  RSP_3303  putative methyl accepting chemotaxis protein, McpG  43.37 
 
 
534 aa  343  4e-93  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.627808  n/a   
 
 
-
 
NC_009050  Rsph17029_4036  methyl-accepting chemotaxis sensory transducer  43.18 
 
 
534 aa  342  1e-92  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal 
 
 
-
 
NC_009429  Rsph17025_3891  hypothetical protein  40.77 
 
 
551 aa  340  2.9999999999999998e-92  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal  0.452082 
 
 
-
 
NC_002939  GSU1298  methyl-accepting chemotaxis protein  43.45 
 
 
568 aa  338  9.999999999999999e-92  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_011769  DvMF_2542  methyl-accepting chemotaxis sensory transducer  51.68 
 
 
597 aa  338  1.9999999999999998e-91  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_007908  Rfer_0902  methyl-accepting chemotaxis sensory transducer  38.3 
 
 
550 aa  332  8e-90  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_0949  methyl-accepting chemotaxis sensory transducer  61.24 
 
 
554 aa  329  7e-89  Geobacter sp. M21  Bacteria  n/a    normal  0.0219131 
 
 
-
 
NC_007517  Gmet_2422  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  56.98 
 
 
1046 aa  329  8e-89  Geobacter metallireducens GS-15  Bacteria  normal  0.925436  normal 
 
 
-
 
NC_008609  Ppro_1601  methyl-accepting chemotaxis sensory transducer  53.85 
 
 
1500 aa  327  4.0000000000000003e-88  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_009429  Rsph17025_3299  hypothetical protein  42.99 
 
 
547 aa  323  4e-87  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.530599  normal  0.4786 
 
 
-
 
NC_002939  GSU1140  methyl-accepting chemotaxis protein  56.66 
 
 
727 aa  323  6e-87  Geobacter sulfurreducens PCA  Bacteria  normal  0.664897  n/a   
 
 
-
 
NC_012918  GM21_1294  methyl-accepting chemotaxis sensory transducer  62.5 
 
 
686 aa  321  3e-86  Geobacter sp. M21  Bacteria  n/a    hitchhiker  4.66893e-19 
 
 
-
 
NC_002939  GSU1303  methyl-accepting chemotaxis protein  56.19 
 
 
494 aa  320  3.9999999999999996e-86  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_1735  methyl-accepting chemotaxis sensory transducer  54.44 
 
 
868 aa  319  7.999999999999999e-86  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_008609  Ppro_2710  methyl-accepting chemotaxis sensory transducer  53.56 
 
 
969 aa  318  1e-85  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_1366  methyl-accepting chemotaxis sensory transducer with Cache sensor  53.37 
 
 
1088 aa  315  9.999999999999999e-85  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.00000000517956 
 
 
-
 
NC_002939  GSU1294  methyl-accepting chemotaxis protein  65.58 
 
 
962 aa  315  1.9999999999999998e-84  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_007519  Dde_1077  methyl-accepting chemotaxis sensory transducer  53.72 
 
 
690 aa  315  1.9999999999999998e-84  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.317064  n/a   
 
 
-
 
NC_008576  Mmc1_2401  methyl-accepting chemotaxis sensory transducer  53.25 
 
 
674 aa  315  1.9999999999999998e-84  Magnetococcus sp. MC-1  Bacteria  decreased coverage  0.0000495749  normal  0.0928318 
 
 
-
 
NC_011146  Gbem_3298  methyl-accepting chemotaxis sensory transducer  51.39 
 
 
553 aa  311  1e-83  Geobacter bemidjiensis Bem  Bacteria  normal  0.62981  n/a   
 
 
-
 
NC_011146  Gbem_1482  methyl-accepting chemotaxis sensory transducer  55.56 
 
 
735 aa  312  1e-83  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_2772  methyl-accepting chemotaxis sensory transducer  55.56 
 
 
735 aa  312  1e-83  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_011891  A2cp1_2573  methyl-accepting chemotaxis sensory transducer  40.62 
 
 
621 aa  310  5e-83  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  0.650368  n/a   
 
 
-
 
NC_012918  GM21_0950  methyl-accepting chemotaxis sensory transducer  53.66 
 
 
546 aa  310  5e-83  Geobacter sp. M21  Bacteria  n/a    normal  0.187483 
 
 
-
 
NC_011146  Gbem_3297  methyl-accepting chemotaxis sensory transducer  52.04 
 
 
548 aa  310  5.9999999999999995e-83  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_0912  methyl-accepting chemotaxis protein  38.5 
 
 
551 aa  308  2.0000000000000002e-82  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_011769  DvMF_1209  methyl-accepting chemotaxis sensory transducer  56.65 
 
 
659 aa  308  2.0000000000000002e-82  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.261932 
 
 
-
 
NC_008751  Dvul_2361  methyl-accepting chemotaxis sensory transducer  55.56 
 
 
652 aa  308  2.0000000000000002e-82  Desulfovibrio vulgaris DP4  Bacteria  normal  0.128072  normal  0.188082 
 
 
-
 
NC_009483  Gura_2989  methyl-accepting chemotaxis sensory transducer  54.45 
 
 
1093 aa  307  3e-82  Geobacter uraniireducens Rf4  Bacteria  normal  0.653084  n/a   
 
 
-
 
NC_007005  Psyr_0785  histidine kinase, HAMP region: chemotaxis sensory transducer  40.5 
 
 
551 aa  305  1.0000000000000001e-81  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.367078  normal 
 
 
-
 
NC_007760  Adeh_1380  methyl-accepting chemotaxis sensory transducer  60.43 
 
 
608 aa  304  3.0000000000000004e-81  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.236828  n/a   
 
 
-
 
NC_011145  AnaeK_2477  methyl-accepting chemotaxis sensory transducer  46.1 
 
 
617 aa  303  6.000000000000001e-81  Anaeromyxobacter sp. K  Bacteria  normal  0.200364  n/a   
 
 
-
 
NC_009428  Rsph17025_1788  methyl-accepting chemotaxis sensory transducer  40.93 
 
 
544 aa  303  7.000000000000001e-81  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal 
 
 
-
 
NC_011146  Gbem_2847  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  52.74 
 
 
1089 aa  302  1e-80  Geobacter bemidjiensis Bem  Bacteria  hitchhiker  0.000851175  n/a   
 
 
-
 
NC_012918  GM21_1108  methyl-accepting chemotaxis sensory transducer  64.79 
 
 
685 aa  301  2e-80  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_010814  Glov_1733  methyl-accepting chemotaxis sensory transducer  61.23 
 
 
823 aa  300  3e-80  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_2423  methyl-accepting chemotaxis sensory transducer  58.76 
 
 
740 aa  300  4e-80  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_012918  GM21_1280  methyl-accepting chemotaxis sensory transducer  57.81 
 
 
1048 aa  300  6e-80  Geobacter sp. M21  Bacteria  n/a    normal  0.0818053 
 
 
-
 
NC_009483  Gura_1191  methyl-accepting chemotaxis sensory transducer  53.28 
 
 
846 aa  299  7e-80  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_008576  Mmc1_0628  methyl-accepting chemotaxis sensory transducer  45.61 
 
 
675 aa  298  1e-79  Magnetococcus sp. MC-1  Bacteria  normal  normal 
 
 
-
 
NC_007298  Daro_1143  histidine kinase, HAMP region: chemotaxis sensory transducer  37.6 
 
 
541 aa  297  4e-79  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_011146  Gbem_2945  methyl-accepting chemotaxis sensory transducer  57.59 
 
 
780 aa  296  5e-79  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_008751  Dvul_1207  methyl-accepting chemotaxis sensory transducer  52.29 
 
 
720 aa  296  5e-79  Desulfovibrio vulgaris DP4  Bacteria  normal  normal  0.149931 
 
 
-
 
NC_009439  Pmen_1567  methyl-accepting chemotaxis sensory transducer  43.99 
 
 
547 aa  295  2e-78  Pseudomonas mendocina ymp  Bacteria  normal  0.0467505  normal 
 
 
-
 
NC_008576  Mmc1_3308  methyl-accepting chemotaxis sensory transducer  48.78 
 
 
682 aa  295  2e-78  Magnetococcus sp. MC-1  Bacteria  normal  0.785168  normal 
 
 
-
 
NC_011146  Gbem_2944  methyl-accepting chemotaxis sensory transducer  53.3 
 
 
780 aa  293  4e-78  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_007760  Adeh_1160  methyl-accepting chemotaxis sensory transducer  42.15 
 
 
532 aa  293  4e-78  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_2942  methyl-accepting chemotaxis sensory transducer  53.01 
 
 
1049 aa  291  2e-77  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_007954  Sden_3297  chemotaxis sensory transducer  49.84 
 
 
543 aa  291  2e-77  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_011145  AnaeK_1691  methyl-accepting chemotaxis sensory transducer  38.67 
 
 
553 aa  291  2e-77  Anaeromyxobacter sp. K  Bacteria  normal  0.302444  n/a   
 
 
-
 
NC_009943  Dole_2000  methyl-accepting chemotaxis sensory transducer  48.67 
 
 
559 aa  290  3e-77  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.25845  n/a   
 
 
-
 
NC_011891  A2cp1_1762  methyl-accepting chemotaxis sensory transducer  38.67 
 
 
553 aa  290  7e-77  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
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