More than 300 homologs were found in PanDaTox collection
for query gene RSP_3708 on replicon NC_007494
Organism: Rhodobacter sphaeroides 2.4.1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007494  RSP_3708  methyl accepting chemotaxis protein  100 
 
 
553 aa  1082    Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_009429  Rsph17025_3251  hypothetical protein  74.37 
 
 
552 aa  777    Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.367816  normal  0.217501 
 
 
-
 
NC_009050  Rsph17029_3443  methyl-accepting chemotaxis sensory transducer  98.55 
 
 
553 aa  1064    Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal  0.0628443 
 
 
-
 
NC_009428  Rsph17025_1046  methyl-accepting chemotaxis sensory transducer  52.89 
 
 
551 aa  501  1e-140  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal 
 
 
-
 
NC_009429  Rsph17025_3891  hypothetical protein  51.68 
 
 
551 aa  463  1e-129  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal  0.452082 
 
 
-
 
NC_007494  RSP_3083  methyl accepting chemotaxis protein  51.69 
 
 
561 aa  449  1e-125  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.481742  n/a   
 
 
-
 
NC_009431  Rsph17025_4246  hypothetical protein  50.81 
 
 
562 aa  451  1e-125  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.2464  normal  0.120296 
 
 
-
 
NC_009050  Rsph17029_3810  methyl-accepting chemotaxis sensory transducer  51.77 
 
 
561 aa  451  1e-125  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal  0.296432 
 
 
-
 
NC_009429  Rsph17025_3299  hypothetical protein  48 
 
 
547 aa  404  1e-111  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.530599  normal  0.4786 
 
 
-
 
NC_007493  RSP_2442  methyl accepting chemotaxis protein, McpB  46.97 
 
 
560 aa  401  9.999999999999999e-111  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.648609  n/a   
 
 
-
 
NC_007494  RSP_3303  putative methyl accepting chemotaxis protein, McpG  48.82 
 
 
534 aa  399  9.999999999999999e-111  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.627808  n/a   
 
 
-
 
NC_009050  Rsph17029_4036  methyl-accepting chemotaxis sensory transducer  48.82 
 
 
534 aa  401  9.999999999999999e-111  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal 
 
 
-
 
NC_009049  Rsph17029_1106  methyl-accepting chemotaxis sensory transducer  46.97 
 
 
560 aa  401  9.999999999999999e-111  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal  0.809659 
 
 
-
 
NC_007494  RSP_3432  methyl-accepting chemotaxis protein  51.21 
 
 
519 aa  383  1e-105  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.0745866  n/a   
 
 
-
 
NC_009050  Rsph17029_3077  methyl-accepting chemotaxis sensory transducer  51.21 
 
 
519 aa  383  1e-105  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.268982  normal  0.422774 
 
 
-
 
NC_009429  Rsph17025_3682  hypothetical protein  50.39 
 
 
519 aa  379  1e-104  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal  0.552968 
 
 
-
 
NC_007494  RSP_3108  putative methyl accepting chemotaxis protein  49.29 
 
 
562 aa  370  1e-101  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_009050  Rsph17029_3837  methyl-accepting chemotaxis sensory transducer  49.29 
 
 
562 aa  371  1e-101  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal 
 
 
-
 
NC_007643  Rru_A1404  chemotaxis sensory transducer  40.84 
 
 
611 aa  347  2e-94  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.011031  n/a   
 
 
-
 
NC_010510  Mrad2831_5777  methyl-accepting chemotaxis sensory transducer  60.06 
 
 
705 aa  348  2e-94  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.807181  normal  0.137814 
 
 
-
 
NC_011989  Avi_4314  methyl-accepting chemotaxis protein  55.23 
 
 
564 aa  344  2.9999999999999997e-93  Agrobacterium vitis S4  Bacteria  normal  0.77703  n/a   
 
 
-
 
NC_007643  Rru_A1401  chemotaxis sensory transducer  42.19 
 
 
569 aa  343  7e-93  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_009428  Rsph17025_1788  methyl-accepting chemotaxis sensory transducer  46.88 
 
 
544 aa  341  2e-92  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal 
 
 
-
 
NC_012850  Rleg_3559  methyl-accepting chemotaxis sensory transducer  41.83 
 
 
602 aa  332  9e-90  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.495549  normal  0.432808 
 
 
-
 
NC_013173  Dbac_1421  methyl-accepting chemotaxis sensory transducer  50.91 
 
 
676 aa  331  2e-89  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.45919  n/a   
 
 
-
 
NC_011369  Rleg2_3262  methyl-accepting chemotaxis sensory transducer  42.86 
 
 
569 aa  330  3e-89  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.846629 
 
 
-
 
NC_012850  Rleg_3561  methyl-accepting chemotaxis sensory transducer  42.43 
 
 
569 aa  330  4e-89  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.216373 
 
 
-
 
NC_013173  Dbac_1917  methyl-accepting chemotaxis sensory transducer  52.92 
 
 
677 aa  329  7e-89  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.134066  n/a   
 
 
-
 
NC_010338  Caul_0614  methyl-accepting chemotaxis sensory transducer  44.1 
 
 
560 aa  327  3e-88  Caulobacter sp. K31  Bacteria  normal  normal 
 
 
-
 
NC_008609  Ppro_1608  methyl-accepting chemotaxis sensory transducer  38.41 
 
 
558 aa  323  6e-87  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_011989  Avi_4312  methyl-accepting chemotaxis protein  40.13 
 
 
606 aa  321  1.9999999999999998e-86  Agrobacterium vitis S4  Bacteria  normal  0.623028  n/a   
 
 
-
 
NC_011369  Rleg2_3260  methyl-accepting chemotaxis sensory transducer  40.7 
 
 
602 aa  320  5e-86  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.0582253  normal  0.204929 
 
 
-
 
NC_007925  RPC_4672  methyl-accepting chemotaxis sensory transducer  42.88 
 
 
693 aa  315  9e-85  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_009483  Gura_2779  methyl-accepting chemotaxis sensory transducer  47.97 
 
 
566 aa  314  2.9999999999999996e-84  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_6733  putative methyl-accepting chemotaxis protein  49.18 
 
 
738 aa  313  3.9999999999999997e-84  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.556647  normal 
 
 
-
 
NC_009485  BBta_6735  methyl-accepting chemotaxis receptor (MCP)  43.71 
 
 
566 aa  313  4.999999999999999e-84  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.0787905  normal 
 
 
-
 
NC_007925  RPC_4671  methyl-accepting chemotaxis sensory transducer  52.24 
 
 
691 aa  310  5.9999999999999995e-83  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_7836  methyl-accepting chemotaxis receptor (MCP)  40.83 
 
 
609 aa  310  5.9999999999999995e-83  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.518607  normal  0.95176 
 
 
-
 
NC_013173  Dbac_2647  methyl-accepting chemotaxis sensory transducer  39.62 
 
 
554 aa  309  8e-83  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.910941  n/a   
 
 
-
 
NC_007925  RPC_4674  methyl-accepting chemotaxis sensory transducer  49.88 
 
 
734 aa  309  1.0000000000000001e-82  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_7837  putative methyl-accepting chemotaxis protein (MCP)  52.35 
 
 
702 aa  306  7e-82  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_009483  Gura_2985  methyl-accepting chemotaxis sensory transducer  38.61 
 
 
576 aa  305  1.0000000000000001e-81  Geobacter uraniireducens Rf4  Bacteria  normal  0.293775  n/a   
 
 
-
 
NC_007643  Rru_A1403  methyl-accepting chemotaxis sensory transducer  39.31 
 
 
637 aa  305  2.0000000000000002e-81  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_0950  methyl-accepting chemotaxis sensory transducer  41.76 
 
 
546 aa  304  3.0000000000000004e-81  Geobacter sp. M21  Bacteria  n/a    normal  0.187483 
 
 
-
 
NC_012918  GM21_1105  methyl-accepting chemotaxis sensory transducer  38.56 
 
 
563 aa  304  3.0000000000000004e-81  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_010505  Mrad2831_4817  methyl-accepting chemotaxis sensory transducer  54.84 
 
 
747 aa  304  3.0000000000000004e-81  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  hitchhiker  0.00849638 
 
 
-
 
NC_008609  Ppro_1601  methyl-accepting chemotaxis sensory transducer  54.23 
 
 
1500 aa  299  9e-80  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU1304  methyl-accepting chemotaxis protein  49.11 
 
 
566 aa  298  1e-79  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_011769  DvMF_2542  methyl-accepting chemotaxis sensory transducer  47.48 
 
 
597 aa  298  2e-79  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_011146  Gbem_3297  methyl-accepting chemotaxis sensory transducer  41.14 
 
 
548 aa  297  3e-79  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_011004  Rpal_0142  methyl-accepting chemotaxis sensory transducer  49.76 
 
 
733 aa  297  3e-79  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.134985  n/a   
 
 
-
 
NC_009431  Rsph17025_4277  hypothetical protein  42.29 
 
 
555 aa  294  2e-78  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.280884  normal 
 
 
-
 
NC_008576  Mmc1_2401  methyl-accepting chemotaxis sensory transducer  48.03 
 
 
674 aa  293  7e-78  Magnetococcus sp. MC-1  Bacteria  decreased coverage  0.0000495749  normal  0.0928318 
 
 
-
 
NC_007519  Dde_1077  methyl-accepting chemotaxis sensory transducer  47.91 
 
 
690 aa  293  8e-78  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.317064  n/a   
 
 
-
 
NC_011989  Avi_3947  methyl-accepting chemotaxis protein  52.56 
 
 
619 aa  292  9e-78  Agrobacterium vitis S4  Bacteria  normal  0.412994  n/a   
 
 
-
 
NC_007517  Gmet_2424  methyl-accepting chemotaxis sensory transducer  48.8 
 
 
581 aa  292  1e-77  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_012850  Rleg_3560  methyl-accepting chemotaxis sensory transducer  53.97 
 
 
640 aa  292  1e-77  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.521589  normal  0.347271 
 
 
-
 
NC_002939  GSU0683  methyl-accepting chemotaxis protein, putative  39.3 
 
 
568 aa  291  2e-77  Geobacter sulfurreducens PCA  Bacteria  normal  0.268569  n/a   
 
 
-
 
NC_012918  GM21_0949  methyl-accepting chemotaxis sensory transducer  52.58 
 
 
554 aa  291  3e-77  Geobacter sp. M21  Bacteria  n/a    normal  0.0219131 
 
 
-
 
NC_007908  Rfer_0902  methyl-accepting chemotaxis sensory transducer  36.77 
 
 
550 aa  286  5.999999999999999e-76  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU1303  methyl-accepting chemotaxis protein  47.28 
 
 
494 aa  286  7e-76  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_011369  Rleg2_3261  methyl-accepting chemotaxis sensory transducer  53.19 
 
 
640 aa  286  8e-76  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.444549 
 
 
-
 
NC_002939  GSU1300  methyl-accepting chemotaxis protein  42.21 
 
 
563 aa  285  1.0000000000000001e-75  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_009439  Pmen_1567  methyl-accepting chemotaxis sensory transducer  38.16 
 
 
547 aa  285  1.0000000000000001e-75  Pseudomonas mendocina ymp  Bacteria  normal  0.0467505  normal 
 
 
-
 
NC_002939  GSU1298  methyl-accepting chemotaxis protein  48.81 
 
 
568 aa  285  2.0000000000000002e-75  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_008576  Mmc1_0628  methyl-accepting chemotaxis sensory transducer  46.52 
 
 
675 aa  281  1e-74  Magnetococcus sp. MC-1  Bacteria  normal  normal 
 
 
-
 
NC_011146  Gbem_3298  methyl-accepting chemotaxis sensory transducer  50.28 
 
 
553 aa  282  1e-74  Geobacter bemidjiensis Bem  Bacteria  normal  0.62981  n/a   
 
 
-
 
NC_007925  RPC_4673  methyl-accepting chemotaxis sensory transducer  53.24 
 
 
640 aa  280  3e-74  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_6734  methyl-accepting chemotaxis receptor (MCP)  55.25 
 
 
650 aa  280  4e-74  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.221073  normal 
 
 
-
 
NC_007517  Gmet_2422  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  51.73 
 
 
1046 aa  279  7e-74  Geobacter metallireducens GS-15  Bacteria  normal  0.925436  normal 
 
 
-
 
NC_010814  Glov_1735  methyl-accepting chemotaxis sensory transducer  49.71 
 
 
868 aa  276  5e-73  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_1294  methyl-accepting chemotaxis sensory transducer  54.9 
 
 
686 aa  277  5e-73  Geobacter sp. M21  Bacteria  n/a    hitchhiker  4.66893e-19 
 
 
-
 
NC_008609  Ppro_2710  methyl-accepting chemotaxis sensory transducer  50.15 
 
 
969 aa  276  8e-73  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_010338  Caul_0615  methyl-accepting chemotaxis sensory transducer  51.18 
 
 
599 aa  275  1.0000000000000001e-72  Caulobacter sp. K31  Bacteria  normal  normal 
 
 
-
 
NC_011981  Avi_7320  methyl-accepting chemotaxis protein  59.72 
 
 
774 aa  275  2.0000000000000002e-72  Agrobacterium vitis S4  Bacteria  normal  0.364364  n/a   
 
 
-
 
NC_011769  DvMF_1209  methyl-accepting chemotaxis sensory transducer  48.91 
 
 
659 aa  275  2.0000000000000002e-72  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.261932 
 
 
-
 
NC_002939  GSU1294  methyl-accepting chemotaxis protein  53.41 
 
 
962 aa  273  6e-72  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_0912  methyl-accepting chemotaxis protein  36.31 
 
 
551 aa  272  1e-71  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_011662  Tmz1t_1318  methyl-accepting chemotaxis sensory transducer  41.4 
 
 
555 aa  272  1e-71  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_008751  Dvul_1207  methyl-accepting chemotaxis sensory transducer  50.15 
 
 
720 aa  272  1e-71  Desulfovibrio vulgaris DP4  Bacteria  normal  normal  0.149931 
 
 
-
 
NC_009050  Rsph17029_3065  methyl-accepting chemotaxis sensory transducer  38.93 
 
 
524 aa  272  1e-71  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal  0.60396 
 
 
-
 
NC_002939  GSU1140  methyl-accepting chemotaxis protein  51.9 
 
 
727 aa  271  2e-71  Geobacter sulfurreducens PCA  Bacteria  normal  0.664897  n/a   
 
 
-
 
NC_012918  GM21_2772  methyl-accepting chemotaxis sensory transducer  53.01 
 
 
735 aa  271  2.9999999999999997e-71  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_011146  Gbem_1482  methyl-accepting chemotaxis sensory transducer  53.01 
 
 
735 aa  270  4e-71  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_011145  AnaeK_2477  methyl-accepting chemotaxis sensory transducer  53.51 
 
 
617 aa  270  5e-71  Anaeromyxobacter sp. K  Bacteria  normal  0.200364  n/a   
 
 
-
 
NC_007954  Sden_3297  chemotaxis sensory transducer  48.72 
 
 
543 aa  270  5.9999999999999995e-71  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_007760  Adeh_3897  methyl-accepting chemotaxis sensory transducer  48.76 
 
 
551 aa  269  1e-70  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.198365  n/a   
 
 
-
 
NC_011891  A2cp1_2573  methyl-accepting chemotaxis sensory transducer  52.82 
 
 
621 aa  268  2e-70  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  0.650368  n/a   
 
 
-
 
NC_011891  A2cp1_3671  methyl-accepting chemotaxis sensory transducer  51.01 
 
 
509 aa  267  2.9999999999999995e-70  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  0.353813  n/a   
 
 
-
 
NC_011769  DvMF_0621  methyl-accepting chemotaxis sensory transducer  53.49 
 
 
727 aa  266  7e-70  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.0173671 
 
 
-
 
NC_010814  Glov_1733  methyl-accepting chemotaxis sensory transducer  55.43 
 
 
823 aa  266  7e-70  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_1191  methyl-accepting chemotaxis sensory transducer  52.56 
 
 
846 aa  266  7e-70  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_2944  methyl-accepting chemotaxis sensory transducer  49.7 
 
 
780 aa  266  8e-70  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_007298  Daro_1143  histidine kinase, HAMP region: chemotaxis sensory transducer  36.1 
 
 
541 aa  266  8.999999999999999e-70  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_011891  A2cp1_4039  methyl-accepting chemotaxis sensory transducer  48.86 
 
 
551 aa  265  2e-69  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_011145  AnaeK_3998  methyl-accepting chemotaxis sensory transducer  48.86 
 
 
550 aa  265  2e-69  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_1366  methyl-accepting chemotaxis sensory transducer with Cache sensor  52.51 
 
 
1088 aa  265  2e-69  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.00000000517956 
 
 
-
 
NC_011989  Avi_4313  methyl-accepting chemotaxis protein  53.37 
 
 
642 aa  264  3e-69  Agrobacterium vitis S4  Bacteria  normal  0.7654  n/a   
 
 
-
 
NC_011146  Gbem_2945  methyl-accepting chemotaxis sensory transducer  51.03 
 
 
780 aa  264  4e-69  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_2847  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  51.33 
 
 
1089 aa  263  4.999999999999999e-69  Geobacter bemidjiensis Bem  Bacteria  hitchhiker  0.000851175  n/a   
 
 
-
 
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