More than 300 homologs were found in PanDaTox collection
for query gene Mrad2831_1294 on replicon NC_010505
Organism: Methylobacterium radiotolerans JCM 2831



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010505  Mrad2831_1294  LuxR family transcriptional regulator  100 
 
 
252 aa  497  1e-140  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_010505  Mrad2831_0756  LuxR family transcriptional regulator  64.18 
 
 
228 aa  220  1.9999999999999999e-56  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal  0.826443 
 
 
-
 
NC_010172  Mext_1977  regulatory protein LuxR  51.5 
 
 
235 aa  174  1.9999999999999998e-42  Methylobacterium extorquens PA1  Bacteria  normal  0.215897  normal 
 
 
-
 
NC_011757  Mchl_2254  transcriptional regulator, LuxR family  52 
 
 
235 aa  172  5.999999999999999e-42  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_010725  Mpop_1932  transcriptional regulator, LuxR family  50.25 
 
 
241 aa  167  1e-40  Methylobacterium populi BJ001  Bacteria  normal  normal  0.0592371 
 
 
-
 
NC_010511  M446_5044  LuxR family transcriptional regulator  48.67 
 
 
230 aa  164  1.0000000000000001e-39  Methylobacterium sp. 4-46  Bacteria  normal  0.263575  hitchhiker  0.00837426 
 
 
-
 
NC_011894  Mnod_5351  transcriptional regulator, LuxR family  47.75 
 
 
229 aa  144  2e-33  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.649636  n/a   
 
 
-
 
NC_008781  Pnap_3523  two component LuxR family transcriptional regulator  32.71 
 
 
224 aa  89.7  4e-17  Polaromonas naphthalenivorans CJ2  Bacteria  normal  normal 
 
 
-
 
NC_010505  Mrad2831_3042  two component LuxR family transcriptional regulator  33.51 
 
 
222 aa  79  0.00000000000006  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal  0.280021 
 
 
-
 
NC_009997  Sbal195_2246  two component LuxR family transcriptional regulator  27.49 
 
 
214 aa  77.4  0.0000000000002  Shewanella baltica OS195  Bacteria  normal  0.0703025  hitchhiker  0.00413313 
 
 
-
 
NC_013205  Aaci_0385  two component transcriptional regulator, LuxR family  30.73 
 
 
224 aa  77.8  0.0000000000002  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_010682  Rpic_3729  two component transcriptional regulator, LuxR family  31.9 
 
 
214 aa  77  0.0000000000003  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_012856  Rpic12D_3406  two component transcriptional regulator, LuxR family  31.73 
 
 
214 aa  74.7  0.000000000001  Ralstonia pickettii 12D  Bacteria  normal  0.588591  normal 
 
 
-
 
NC_010571  Oter_0370  two component LuxR family transcriptional regulator  34.76 
 
 
214 aa  73.9  0.000000000002  Opitutus terrae PB90-1  Bacteria  normal  normal  0.273913 
 
 
-
 
NC_013132  Cpin_5915  two component transcriptional regulator, LuxR family  26.42 
 
 
207 aa  74.3  0.000000000002  Chitinophaga pinensis DSM 2588  Bacteria  hitchhiker  0.00974735  normal 
 
 
-
 
NC_010725  Mpop_3747  two component transcriptional regulator, LuxR family  34.39 
 
 
221 aa  73.6  0.000000000003  Methylobacterium populi BJ001  Bacteria  normal  normal 
 
 
-
 
NC_009654  Mmwyl1_0679  two component LuxR family transcriptional regulator  36.3 
 
 
213 aa  73.6  0.000000000003  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_007519  Dde_0977  two component LuxR family transcriptional regulator  26.61 
 
 
223 aa  73.2  0.000000000004  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  decreased coverage  0.00800748  n/a   
 
 
-
 
NC_009052  Sbal_1943  two component LuxR family transcriptional regulator  26.07 
 
 
214 aa  72  0.000000000009  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_011149  SeAg_B1780  EsrB  27.88 
 
 
212 aa  71.2  0.00000000001  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  0.111024  n/a   
 
 
-
 
NC_010511  M446_5717  two component LuxR family transcriptional regulator  32.43 
 
 
220 aa  71.2  0.00000000001  Methylobacterium sp. 4-46  Bacteria  normal  0.873964  hitchhiker  0.00405289 
 
 
-
 
NC_013131  Caci_6044  two component transcriptional regulator, LuxR family  32.3 
 
 
226 aa  70.5  0.00000000002  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_010159  YpAngola_A3945  putative DNA-binding response regulator EsrB  28.1 
 
 
210 aa  70.1  0.00000000003  Yersinia pestis Angola  Bacteria  normal  0.0480381  normal 
 
 
-
 
NC_013159  Svir_04820  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  33.82 
 
 
229 aa  70.1  0.00000000003  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.465009  normal 
 
 
-
 
NC_007973  Rmet_3576  two component LuxR family transcriptional regulator  36.36 
 
 
228 aa  70.5  0.00000000003  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_011071  Smal_2340  two component transcriptional regulator, LuxR family  29.56 
 
 
217 aa  70.5  0.00000000003  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.273151  normal 
 
 
-
 
NC_009708  YpsIP31758_3833  putative DNA-binding response regulator EsrB  27.62 
 
 
210 aa  69.7  0.00000000004  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_010465  YPK_3919  two component LuxR family transcriptional regulator  27.62 
 
 
210 aa  69.7  0.00000000004  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_011083  SeHA_C1526  two-component response regulator EsrB  27.4 
 
 
212 aa  69.7  0.00000000005  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  0.577557  hitchhiker  0.00169027 
 
 
-
 
NC_011205  SeD_A1950  hypothetical protein  27.4 
 
 
212 aa  69.7  0.00000000005  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  hitchhiker  0.0094858 
 
 
-
 
NC_010718  Nther_0648  two component transcriptional regulator, LuxR family  30.51 
 
 
215 aa  69.3  0.00000000005  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  normal 
 
 
-
 
NC_011094  SeSA_A1489  EsrB  27.4 
 
 
212 aa  69.7  0.00000000005  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  0.121116  normal  0.320198 
 
 
-
 
NC_013093  Amir_6525  two component transcriptional regulator, LuxR family  34.62 
 
 
216 aa  69.3  0.00000000005  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013510  Tcur_0154  two component transcriptional regulator, LuxR family  29.96 
 
 
244 aa  68.9  0.00000000007  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_007952  Bxe_B0788  two component LuxR family transcriptional regulator  35.71 
 
 
218 aa  68.9  0.00000000008  Burkholderia xenovorans LB400  Bacteria  normal  0.3296  normal 
 
 
-
 
NC_008025  Dgeo_0555  two component LuxR family transcriptional regulator  28.86 
 
 
228 aa  68.9  0.00000000008  Deinococcus geothermalis DSM 11300  Bacteria  normal  normal 
 
 
-
 
NC_008752  Aave_1121  two component LuxR family transcriptional regulator  31.03 
 
 
222 aa  68.9  0.00000000008  Acidovorax citrulli AAC00-1  Bacteria  normal  0.864132  normal  0.872256 
 
 
-
 
NC_010625  Bphy_6469  two component LuxR family transcriptional regulator  30.81 
 
 
213 aa  68.2  0.0000000001  Burkholderia phymatum STM815  Bacteria  normal  normal  0.53826 
 
 
-
 
NC_004310  BR0342  LuxR family DNA-binding response regulator  29.12 
 
 
213 aa  68.2  0.0000000001  Brucella suis 1330  Bacteria  normal  0.0601944  n/a   
 
 
-
 
NC_009505  BOV_0358  LuxR family DNA-binding response regulator  29.12 
 
 
213 aa  68.2  0.0000000001  Brucella ovis ATCC 25840  Bacteria  normal  0.363  n/a   
 
 
-
 
NC_013159  Svir_38420  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  28.77 
 
 
226 aa  68.2  0.0000000001  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_007908  Rfer_0894  two component LuxR family transcriptional regulator  27.44 
 
 
217 aa  67.8  0.0000000001  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_010676  Bphyt_4476  two component transcriptional regulator, LuxR family  35.71 
 
 
215 aa  68.2  0.0000000001  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_010571  Oter_3357  two component LuxR family transcriptional regulator  32.06 
 
 
238 aa  67.8  0.0000000002  Opitutus terrae PB90-1  Bacteria  normal  0.1255  normal 
 
 
-
 
NC_002977  MCA0777  LuxR family DNA binding response regulator  29.17 
 
 
215 aa  67.8  0.0000000002  Methylococcus capsulatus str. Bath  Bacteria  normal  0.891731  n/a   
 
 
-
 
NC_010524  Lcho_1782  two component LuxR family transcriptional regulator  30.81 
 
 
214 aa  67.4  0.0000000002  Leptothrix cholodnii SP-6  Bacteria  n/a    hitchhiker  0.000000360675 
 
 
-
 
NC_010644  Emin_0306  two component LuxR family transcriptional regulator  30.73 
 
 
215 aa  67.4  0.0000000002  Elusimicrobium minutum Pei191  Bacteria  unclonable  0.000000000161342  hitchhiker  0.00000159266 
 
 
-
 
NC_009439  Pmen_0083  two component LuxR family transcriptional regulator  30.58 
 
 
210 aa  67.8  0.0000000002  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_009972  Haur_0983  two component LuxR family transcriptional regulator  25.36 
 
 
213 aa  66.6  0.0000000003  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_010627  Bphy_7761  two component LuxR family transcriptional regulator  30.29 
 
 
213 aa  67  0.0000000003  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_1820  two component transcriptional regulator, LuxR family  29.58 
 
 
216 aa  67  0.0000000003  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.677493  normal  0.0923177 
 
 
-
 
NC_009513  Lreu_0898  two component LuxR family transcriptional regulator  24.64 
 
 
217 aa  67  0.0000000003  Lactobacillus reuteri DSM 20016  Bacteria  hitchhiker  0.00000112877  n/a   
 
 
-
 
NC_009441  Fjoh_4628  two component LuxR family transcriptional regulator  28.19 
 
 
219 aa  66.6  0.0000000003  Flavobacterium johnsoniae UW101  Bacteria  normal  n/a   
 
 
-
 
NC_009380  Strop_3824  response regulator receiver  31.34 
 
 
228 aa  67  0.0000000003  Salinispora tropica CNB-440  Bacteria  normal  0.206519  normal 
 
 
-
 
NC_013947  Snas_2469  two component transcriptional regulator, LuxR family  34.31 
 
 
214 aa  66.6  0.0000000004  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.126163  normal 
 
 
-
 
NC_011831  Cagg_0340  two component transcriptional regulator, LuxR family  28.95 
 
 
217 aa  66.6  0.0000000004  Chloroflexus aggregans DSM 9485  Bacteria  hitchhiker  0.00614189  hitchhiker  0.00317709 
 
 
-
 
NC_013131  Caci_8900  two component transcriptional regulator, LuxR family  31.19 
 
 
221 aa  66.6  0.0000000004  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.967084  normal 
 
 
-
 
NC_008044  TM1040_0876  two component LuxR family transcriptional regulator  28.72 
 
 
233 aa  66.6  0.0000000004  Ruegeria sp. TM1040  Bacteria  normal  0.481499  normal  0.345787 
 
 
-
 
NC_011080  SNSL254_A1504  hypothetical protein  34.21 
 
 
212 aa  66.2  0.0000000005  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  hitchhiker  0.000000918459 
 
 
-
 
NC_003295  RSc2312  two-component response regulator transcription regulator protein  28.38 
 
 
238 aa  66.2  0.0000000005  Ralstonia solanacearum GMI1000  Bacteria  normal  normal  0.500036 
 
 
-
 
NC_007347  Reut_A3419  LuxR response regulator receiver  32.11 
 
 
231 aa  66.2  0.0000000005  Ralstonia eutropha JMP134  Bacteria  normal  0.393456  n/a   
 
 
-
 
NC_007644  Moth_0023  two component LuxR family transcriptional regulator  27.41 
 
 
221 aa  66.2  0.0000000005  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.273145  hitchhiker  0.00000136124 
 
 
-
 
NC_007760  Adeh_1997  two component LuxR family transcriptional regulator  29.68 
 
 
218 aa  66.2  0.0000000005  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_013204  Elen_1743  two component transcriptional regulator, LuxR family  27.78 
 
 
214 aa  65.9  0.0000000005  Eggerthella lenta DSM 2243  Bacteria  normal  0.370009  normal  0.039988 
 
 
-
 
NC_013595  Sros_1936  response regulator receiver protein  27.36 
 
 
205 aa  65.9  0.0000000006  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_011886  Achl_0642  two component transcriptional regulator, LuxR family  29.63 
 
 
208 aa  65.9  0.0000000006  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_009675  Anae109_1810  two component LuxR family transcriptional regulator  30.52 
 
 
218 aa  65.5  0.0000000007  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal 
 
 
-
 
NC_013456  VEA_003136  transcriptional regulator LuxR family protein  28.44 
 
 
212 aa  65.9  0.0000000007  Vibrio sp. Ex25  Bacteria  normal  0.12843  n/a   
 
 
-
 
NC_008009  Acid345_1691  two component LuxR family transcriptional regulator  28.5 
 
 
208 aa  65.5  0.0000000008  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal  0.0637899 
 
 
-
 
CP001509  ECD_00485  predicted DNA-binding transcriptional regulator  34.55 
 
 
210 aa  64.7  0.000000001  Escherichia coli BL21(DE3)  Bacteria  normal  n/a   
 
 
-
 
CP001637  EcDH1_3078  two component transcriptional regulator, LuxR family  34.55 
 
 
210 aa  64.7  0.000000001  Escherichia coli DH1  Bacteria  normal  n/a   
 
 
-
 
NC_012892  B21_00490  hypothetical protein  34.55 
 
 
210 aa  64.7  0.000000001  Escherichia coli BL21  Bacteria  normal  n/a   
 
 
-
 
NC_010468  EcolC_3087  transcriptional regulator FimZ  34.55 
 
 
210 aa  64.7  0.000000001  Escherichia coli ATCC 8739  Bacteria  normal  normal 
 
 
-
 
NC_013421  Pecwa_1775  two component transcriptional regulator, LuxR family  32.16 
 
 
209 aa  65.1  0.000000001  Pectobacterium wasabiae WPP163  Bacteria  normal  0.814588  n/a   
 
 
-
 
NC_012917  PC1_1369  two component transcriptional regulator, LuxR family  32.16 
 
 
218 aa  64.7  0.000000001  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.380225  n/a   
 
 
-
 
NC_011353  ECH74115_0636  transcriptional regulator FimZ  34.55 
 
 
210 aa  64.7  0.000000001  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  0.931873  normal  0.250092 
 
 
-
 
NC_007650  BTH_II2335  LuxR family DNA-binding response regulator  29.8 
 
 
215 aa  64.7  0.000000001  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_1910  response regulator receiver protein  29.36 
 
 
226 aa  64.7  0.000000001  Streptosporangium roseum DSM 43021  Bacteria  normal  0.238062  normal  0.36963 
 
 
-
 
NC_010718  Nther_2079  two component transcriptional regulator, LuxR family  24.48 
 
 
212 aa  64.7  0.000000001  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  normal 
 
 
-
 
NC_009800  EcHS_A0610  transcriptional regulator FimZ  34.55 
 
 
210 aa  64.7  0.000000001  Escherichia coli HS  Bacteria  normal  n/a   
 
 
-
 
NC_009801  EcE24377A_0577  transcriptional regulator FimZ  34.55 
 
 
210 aa  64.7  0.000000001  Escherichia coli E24377A  Bacteria  normal  n/a   
 
 
-
 
NC_010498  EcSMS35_0580  transcriptional regulator FimZ  34.55 
 
 
210 aa  64.7  0.000000001  Escherichia coli SMS-3-5  Bacteria  normal  normal 
 
 
-
 
NC_009338  Mflv_3579  two component LuxR family transcriptional regulator  33.09 
 
 
217 aa  65.1  0.000000001  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.393396  normal  0.0540104 
 
 
-
 
NC_010002  Daci_5322  two component LuxR family transcriptional regulator  30.93 
 
 
220 aa  64.7  0.000000001  Delftia acidovorans SPH-1  Bacteria  normal  normal  0.929677 
 
 
-
 
NC_006349  BMAA2071  LuxR family DNA-binding response regulator  30.5 
 
 
215 aa  64.7  0.000000002  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_013235  Namu_2014  two component transcriptional regulator, LuxR family  34.03 
 
 
212 aa  64.7  0.000000002  Nakamurella multipartita DSM 44233  Bacteria  normal  0.172206  hitchhiker  0.00394331 
 
 
-
 
NC_007963  Csal_3030  two component LuxR family transcriptional regulator  31.51 
 
 
211 aa  63.9  0.000000002  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_011145  AnaeK_1881  two component transcriptional regulator, LuxR family  28.77 
 
 
218 aa  64.3  0.000000002  Anaeromyxobacter sp. K  Bacteria  normal  0.0160211  n/a   
 
 
-
 
NC_008255  CHU_0105  two component LuxR family transcriptional regulator  23.53 
 
 
215 aa  64.3  0.000000002  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  0.0303042  normal  0.309888 
 
 
-
 
NC_009708  YpsIP31758_2764  transcriptional regulator RcsB  27.89 
 
 
217 aa  64.7  0.000000002  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  0.408225  n/a   
 
 
-
 
NC_010552  BamMC406_5498  two component LuxR family transcriptional regulator  30.49 
 
 
214 aa  64.7  0.000000002  Burkholderia ambifaria MC40-6  Bacteria  normal  hitchhiker  0.00509748 
 
 
-
 
NC_010465  YPK_2843  transcriptional regulator RcsB  27.89 
 
 
217 aa  64.7  0.000000002  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_011662  Tmz1t_1311  two component transcriptional regulator, LuxR family  26.32 
 
 
226 aa  63.9  0.000000002  Thauera sp. MZ1T  Bacteria  normal  0.165019  n/a   
 
 
-
 
NC_010159  YpAngola_A1307  transcriptional regulator RcsB  27.89 
 
 
217 aa  64.7  0.000000002  Yersinia pestis Angola  Bacteria  normal  0.0162714  normal 
 
 
-
 
NC_008784  BMASAVP1_1100  LuxR family DNA-binding response regulator  30.5 
 
 
215 aa  64.7  0.000000002  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_008835  BMA10229_1379  LuxR family DNA-binding response regulator  30.5 
 
 
215 aa  64.7  0.000000002  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_009075  BURPS668_A3248  LuxR family DNA-binding response regulator  30.35 
 
 
215 aa  64.3  0.000000002  Burkholderia pseudomallei 668  Bacteria  normal  0.780539  n/a   
 
 
-
 
NC_009078  BURPS1106A_A3133  LuxR family DNA-binding response regulator  30.5 
 
 
215 aa  64.3  0.000000002  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_009079  BMA10247_A2364  LuxR family DNA-binding response regulator  30.5 
 
 
215 aa  64.7  0.000000002  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_010086  Bmul_3186  two component LuxR family transcriptional regulator  32.86 
 
 
214 aa  64.3  0.000000002  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal  0.10411 
 
 
-
 
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