More than 300 homologs were found in PanDaTox collection
for query gene Bphy_6440 on replicon NC_010625
Organism: Burkholderia phymatum STM815



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010625  Bphy_6440  multiple antibiotic resistance (MarC)-related protein  100 
 
 
240 aa  471  1e-132  Burkholderia phymatum STM815  Bacteria  normal  normal  0.371773 
 
 
-
 
NC_009720  Xaut_4291  multiple antibiotic resistance (MarC)-related protein  43.98 
 
 
227 aa  167  2e-40  Xanthobacter autotrophicus Py2  Bacteria  normal  normal 
 
 
-
 
NC_009379  Pnuc_0573  multiple antibiotic resistance (MarC)-related protein  42.79 
 
 
227 aa  155  6e-37  Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1  Bacteria  normal  n/a   
 
 
-
 
NC_008752  Aave_3885  multiple antibiotic resistance (MarC)-related protein  41.18 
 
 
233 aa  149  3e-35  Acidovorax citrulli AAC00-1  Bacteria  normal  0.963175  normal 
 
 
-
 
NC_010086  Bmul_4128  multiple antibiotic resistance (MarC)-related protein  38.74 
 
 
223 aa  142  3e-33  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.0344188  normal  0.129693 
 
 
-
 
NC_010623  Bphy_3136  multiple antibiotic resistance (MarC)-related protein  38.53 
 
 
223 aa  142  4e-33  Burkholderia phymatum STM815  Bacteria  normal  0.0838279  normal 
 
 
-
 
NC_009075  BURPS668_A1493  putative membrane efflux protein  39.82 
 
 
412 aa  142  5e-33  Burkholderia pseudomallei 668  Bacteria  normal  0.191145  n/a   
 
 
-
 
NC_007435  BURPS1710b_A0010  membrane efflux protein  38.43 
 
 
412 aa  141  9e-33  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_009078  BURPS1106A_A1407  MarC membrane protein  38.43 
 
 
412 aa  141  9e-33  Burkholderia pseudomallei 1106a  Bacteria  normal  0.758903  n/a   
 
 
-
 
NC_011894  Mnod_0446  multiple antibiotic resistance (MarC)-related protein  42.47 
 
 
235 aa  141  9.999999999999999e-33  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.91396  n/a   
 
 
-
 
NC_007650  BTH_II1391  hypothetical protein  38.43 
 
 
238 aa  139  3e-32  Burkholderia thailandensis E264  Bacteria  normal  0.0338274  n/a   
 
 
-
 
NC_007511  Bcep18194_B1320  multiple antibiotic resistance (MarC)-related proteins  37.78 
 
 
223 aa  139  3.9999999999999997e-32  Burkholderia sp. 383  Bacteria  normal  normal  0.401348 
 
 
-
 
NC_008391  Bamb_3957  multiple antibiotic resistance (MarC)-related proteins  38.56 
 
 
241 aa  138  8.999999999999999e-32  Burkholderia ambifaria AMMD  Bacteria  normal  0.571495  normal 
 
 
-
 
NC_010552  BamMC406_4420  multiple antibiotic resistance (MarC)-related protein  38.57 
 
 
223 aa  136  2e-31  Burkholderia ambifaria MC40-6  Bacteria  normal  0.314692  normal 
 
 
-
 
NC_011365  Gdia_0266  multiple antibiotic resistance (MarC)-related protein  38.57 
 
 
243 aa  135  5e-31  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  normal 
 
 
-
 
NC_010515  Bcenmc03_5777  multiple antibiotic resistance (MarC)-related protein  38.12 
 
 
227 aa  135  6.0000000000000005e-31  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.782432  normal 
 
 
-
 
NC_008061  Bcen_3841  multiple antibiotic resistance (MarC)-related proteins  38.12 
 
 
227 aa  135  6.0000000000000005e-31  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008543  Bcen2424_4527  multiple antibiotic resistance (MarC)-related proteins  38.12 
 
 
227 aa  135  6.0000000000000005e-31  Burkholderia cenocepacia HI2424  Bacteria  normal  0.0171446  normal 
 
 
-
 
NC_010676  Bphyt_5311  multiple antibiotic resistance (MarC)-related protein  38.99 
 
 
225 aa  132  3e-30  Burkholderia phytofirmans PsJN  Bacteria  normal  0.500133  normal 
 
 
-
 
NC_010531  Pnec_0784  multiple antibiotic resistance (MarC)-related protein  38.86 
 
 
224 aa  132  3.9999999999999996e-30  Polynucleobacter necessarius subsp. necessarius STIR1  Bacteria  normal  normal 
 
 
-
 
NC_008061  Bcen_4957  multiple antibiotic resistance (MarC)-related proteins  39.81 
 
 
222 aa  131  7.999999999999999e-30  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008543  Bcen2424_3203  multiple antibiotic resistance (MarC)-related proteins  39.81 
 
 
222 aa  131  7.999999999999999e-30  Burkholderia cenocepacia HI2424  Bacteria  normal  normal 
 
 
-
 
NC_010511  M446_2065  multiple antibiotic resistance (MarC)-related protein  38.08 
 
 
259 aa  131  1.0000000000000001e-29  Methylobacterium sp. 4-46  Bacteria  normal  0.395791  normal  0.0111097 
 
 
-
 
NC_008835  BMA10229_0431  hypothetical protein  38.29 
 
 
215 aa  129  4.0000000000000003e-29  Burkholderia mallei NCTC 10229  Bacteria  normal  0.380302  n/a   
 
 
-
 
NC_008784  BMASAVP1_0153  hypothetical protein  38.29 
 
 
215 aa  129  4.0000000000000003e-29  Burkholderia mallei SAVP1  Bacteria  normal  0.642552  n/a   
 
 
-
 
NC_009079  BMA10247_A1147  hypothetical protein  36.96 
 
 
234 aa  129  5.0000000000000004e-29  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_006349  BMAA1193  hypothetical protein  36.96 
 
 
234 aa  129  5.0000000000000004e-29  Burkholderia mallei ATCC 23344  Bacteria  normal  0.953041  n/a   
 
 
-
 
NC_010725  Mpop_2436  multiple antibiotic resistance (MarC)-related protein  39.91 
 
 
229 aa  129  5.0000000000000004e-29  Methylobacterium populi BJ001  Bacteria  normal  normal 
 
 
-
 
NC_011757  Mchl_2731  multiple antibiotic resistance (MarC)-related protein  39.73 
 
 
231 aa  127  2.0000000000000002e-28  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.0312653  normal  0.203712 
 
 
-
 
NC_010172  Mext_2508  multiple antibiotic resistance (MarC)-related protein  39.73 
 
 
231 aa  126  4.0000000000000003e-28  Methylobacterium extorquens PA1  Bacteria  normal  0.120905  normal  0.115673 
 
 
-
 
NC_009484  Acry_1888  multiple antibiotic resistance (MarC)-related protein  41.67 
 
 
229 aa  125  5e-28  Acidiphilium cryptum JF-5  Bacteria  normal  n/a   
 
 
-
 
NC_007952  Bxe_B1297  multiple antibiotic resistance (MarC)- related proteins  38.71 
 
 
225 aa  125  5e-28  Burkholderia xenovorans LB400  Bacteria  hitchhiker  0.00195528  normal  0.636405 
 
 
-
 
NC_010515  Bcenmc03_4212  multiple antibiotic resistance (MarC)-related protein  38.18 
 
 
220 aa  125  7e-28  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.420393  normal 
 
 
-
 
NC_010338  Caul_2507  multiple antibiotic resistance (MarC)-related protein  45.33 
 
 
227 aa  121  9e-27  Caulobacter sp. K31  Bacteria  normal  0.357555  normal 
 
 
-
 
NC_010505  Mrad2831_0915  multiple antibiotic resistance (MarC)-related protein  34.8 
 
 
237 aa  106  4e-22  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal  0.0866408 
 
 
-
 
NC_009832  Spro_2141  multiple drug resistance protein MarC  31.22 
 
 
229 aa  103  2e-21  Serratia proteamaculans 568  Bacteria  normal  0.0214276  normal 
 
 
-
 
NC_007947  Mfla_0450  multiple drug resistance protein MarC  32.37 
 
 
219 aa  102  4e-21  Methylobacillus flagellatus KT  Bacteria  normal  0.0439205  normal  0.59514 
 
 
-
 
NC_008255  CHU_1871  multiple antibiotic resistance protein  30.33 
 
 
218 aa  102  4e-21  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  0.126971  hitchhiker  0.00141165 
 
 
-
 
NC_009441  Fjoh_0364  multiple antibiotic resistance (MarC)-related protein  33.49 
 
 
231 aa  101  1e-20  Flavobacterium johnsoniae UW101  Bacteria  normal  0.840532  n/a   
 
 
-
 
NC_011094  SeSA_A1626  multiple drug resistance protein MarC  30.39 
 
 
221 aa  97.1  2e-19  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  normal 
 
 
-
 
NC_011149  SeAg_B1649  multiple drug resistance protein MarC  30.39 
 
 
221 aa  97.1  2e-19  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  0.0716145  n/a   
 
 
-
 
NC_011080  SNSL254_A1634  multiple drug resistance protein MarC  30.39 
 
 
221 aa  97.1  2e-19  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  0.760393  normal 
 
 
-
 
NC_011083  SeHA_C1693  multiple drug resistance protein MarC  30.39 
 
 
221 aa  97.1  2e-19  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  normal 
 
 
-
 
NC_011205  SeD_A1814  multiple drug resistance protein MarC  30.39 
 
 
221 aa  96.7  3e-19  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  normal 
 
 
-
 
NC_012917  PC1_3217  multiple drug resistance protein MarC  27.4 
 
 
224 aa  94.7  1e-18  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.558235  n/a   
 
 
-
 
NC_010571  Oter_0936  multiple antibiotic resistance (MarC)-related protein  28.24 
 
 
225 aa  93.2  3e-18  Opitutus terrae PB90-1  Bacteria  normal  0.19439  normal 
 
 
-
 
NC_013421  Pecwa_1110  multiple drug resistance protein MarC  27.4 
 
 
224 aa  93.6  3e-18  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_007954  Sden_1910  hypothetical protein  30.54 
 
 
207 aa  92.8  4e-18  Shewanella denitrificans OS217  Bacteria  hitchhiker  0.000000443138  n/a   
 
 
-
 
NC_008700  Sama_1694  hypothetical protein  30.05 
 
 
210 aa  92  7e-18  Shewanella amazonensis SB2B  Bacteria  normal  normal  0.0657108 
 
 
-
 
NC_010159  YpAngola_A2628  multiple drug resistance protein MarC  31.86 
 
 
227 aa  92  8e-18  Yersinia pestis Angola  Bacteria  hitchhiker  0.000653473  normal 
 
 
-
 
NC_009708  YpsIP31758_1707  multiple drug resistance protein MarC  31.86 
 
 
227 aa  92  8e-18  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  0.0501787  n/a   
 
 
-
 
NC_010465  YPK_1817  multiple drug resistance protein MarC  31.86 
 
 
227 aa  92  8e-18  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_009436  Ent638_1999  multiple drug resistance protein MarC  28.5 
 
 
221 aa  91.3  1e-17  Enterobacter sp. 638  Bacteria  normal  normal  0.0815668 
 
 
-
 
NC_010581  Bind_3347  multiple drug resistance protein MarC  30.81 
 
 
217 aa  90.9  1e-17  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  normal  0.123982 
 
 
-
 
CP001509  ECD_01486  predicted transporter  30.73 
 
 
221 aa  89  6e-17  Escherichia coli BL21(DE3)  Bacteria  normal  0.917527  n/a   
 
 
-
 
CP001637  EcDH1_2117  multiple antibiotic resistance (MarC)-related protein  30.73 
 
 
221 aa  89  6e-17  Escherichia coli DH1  Bacteria  hitchhiker  0.00000666944  n/a   
 
 
-
 
NC_009801  EcE24377A_1731  multiple drug resistance protein MarC  30.73 
 
 
221 aa  89  6e-17  Escherichia coli E24377A  Bacteria  normal  n/a   
 
 
-
 
NC_012892  B21_01497  hypothetical protein  30.73 
 
 
221 aa  89  6e-17  Escherichia coli BL21  Bacteria  normal  0.982846  n/a   
 
 
-
 
NC_010658  SbBS512_E1676  multiple drug resistance protein MarC  30.73 
 
 
221 aa  89  6e-17  Shigella boydii CDC 3083-94  Bacteria  normal  n/a   
 
 
-
 
NC_010498  EcSMS35_1641  multiple drug resistance protein MarC  31.55 
 
 
221 aa  88.6  7e-17  Escherichia coli SMS-3-5  Bacteria  normal  normal 
 
 
-
 
NC_009634  Mevan_1278  multiple antibiotic resistance (MarC)-related protein  27.32 
 
 
212 aa  89  7e-17  Methanococcus vannielii SB  Archaea  normal  n/a   
 
 
-
 
NC_007643  Rru_A0654  multiple drug resistance protein MarC  28.51 
 
 
217 aa  88.6  9e-17  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.65395  n/a   
 
 
-
 
NC_011353  ECH74115_2143  multiple drug resistance protein MarC  30.73 
 
 
221 aa  88.2  1e-16  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  0.58341  normal 
 
 
-
 
NC_010468  EcolC_2129  multiple drug resistance protein MarC  30.73 
 
 
221 aa  88.2  1e-16  Escherichia coli ATCC 8739  Bacteria  normal  0.430096  normal 
 
 
-
 
NC_009901  Spea_2045  hypothetical protein  31.34 
 
 
207 aa  88.2  1e-16  Shewanella pealeana ATCC 700345  Bacteria  hitchhiker  0.00255531  n/a   
 
 
-
 
NC_013457  VEA_001122  multiple antibiotic resistance protein marC  30.14 
 
 
213 aa  88.2  1e-16  Vibrio sp. Ex25  Bacteria  hitchhiker  0.00063359  n/a   
 
 
-
 
NC_009092  Shew_1911  hypothetical protein  29.47 
 
 
213 aa  88.2  1e-16  Shewanella loihica PV-4  Bacteria  normal  0.0139262  unclonable  0.00000197593 
 
 
-
 
NC_009800  EcHS_A1611  multiple drug resistance protein MarC  30.73 
 
 
221 aa  88.2  1e-16  Escherichia coli HS  Bacteria  normal  n/a   
 
 
-
 
NC_008044  TM1040_0953  multiple antibiotic resistance (MarC)-related proteins  32.84 
 
 
207 aa  87.4  2e-16  Ruegeria sp. TM1040  Bacteria  normal  0.838216  normal 
 
 
-
 
NC_010506  Swoo_2242  hypothetical protein  30.43 
 
 
212 aa  86.7  3e-16  Shewanella woodyi ATCC 51908  Bacteria  normal  0.177472  normal  0.0116098 
 
 
-
 
NC_009436  Ent638_2303  hypothetical protein  27.36 
 
 
215 aa  86.7  3e-16  Enterobacter sp. 638  Bacteria  normal  0.45168  normal 
 
 
-
 
NC_013422  Hneap_0571  multiple antibiotic resistance (MarC)-related protein  32 
 
 
214 aa  86.7  3e-16  Halothiobacillus neapolitanus c2  Bacteria  normal  n/a   
 
 
-
 
NC_012912  Dd1591_2196  hypothetical protein  28.86 
 
 
214 aa  86.7  3e-16  Dickeya zeae Ech1591  Bacteria  normal  0.522591  n/a   
 
 
-
 
NC_008309  HS_1233  hypothetical protein  24.88 
 
 
208 aa  86.3  4e-16  Haemophilus somnus 129PT  Bacteria  normal  n/a   
 
 
-
 
NC_007802  Jann_1818  multiple antibiotic resistance (MarC)-related proteins  31.55 
 
 
205 aa  85.9  6e-16  Jannaschia sp. CCS1  Bacteria  normal  normal  0.397202 
 
 
-
 
NC_013512  Sdel_0042  multiple antibiotic resistance (MarC)-related protein  26.94 
 
 
212 aa  85.5  7e-16  Sulfurospirillum deleyianum DSM 6946  Bacteria  normal  n/a   
 
 
-
 
NC_009438  Sputcn32_0451  multiple drug resistance protein MarC  28.29 
 
 
237 aa  85.5  7e-16  Shewanella putrefaciens CN-32  Bacteria  normal  0.986486  n/a   
 
 
-
 
NC_009783  VIBHAR_03019  hypothetical protein  27.86 
 
 
212 aa  84.7  0.000000000000001  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_013456  VEA_002930  multiple antibiotic transporter  26.87 
 
 
212 aa  84.3  0.000000000000002  Vibrio sp. Ex25  Bacteria  unclonable  0.0000000449619  n/a   
 
 
-
 
NC_013889  TK90_0587  multiple antibiotic resistance (MarC)-related protein  25 
 
 
235 aa  83.2  0.000000000000004  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal  0.0123495 
 
 
-
 
NC_008463  PA14_68750  multiple drug resistance protein MarC  32.88 
 
 
233 aa  83.2  0.000000000000004  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_009901  Spea_2978  multiple antibiotic resistance (MarC)-related protein  33 
 
 
212 aa  82.8  0.000000000000004  Shewanella pealeana ATCC 700345  Bacteria  hitchhiker  0.000715801  n/a   
 
 
-
 
NC_011205  SeD_A1580  hypothetical protein  28.36 
 
 
215 aa  82.4  0.000000000000006  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  0.439502  normal 
 
 
-
 
NC_003910  CPS_1844  hypothetical protein  25.65 
 
 
207 aa  82.4  0.000000000000006  Colwellia psychrerythraea 34H  Bacteria  normal  0.678437  n/a   
 
 
-
 
NC_010159  YpAngola_A2164  hypothetical protein  27.86 
 
 
214 aa  82.4  0.000000000000006  Yersinia pestis Angola  Bacteria  normal  0.033055  normal  0.026113 
 
 
-
 
NC_009784  VIBHAR_06663  hypothetical protein  29.72 
 
 
220 aa  82.4  0.000000000000006  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_011094  SeSA_A1881  hypothetical protein  28.36 
 
 
215 aa  82.4  0.000000000000006  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  normal  0.66407 
 
 
-
 
NC_011149  SeAg_B1397  hypothetical protein  28.36 
 
 
215 aa  82.4  0.000000000000006  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  0.126468  n/a   
 
 
-
 
NC_011080  SNSL254_A1875  hypothetical protein  28.36 
 
 
215 aa  82.4  0.000000000000006  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  0.67019  normal 
 
 
-
 
NC_011083  SeHA_C1938  hypothetical protein  28.36 
 
 
215 aa  82.4  0.000000000000006  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  normal  0.476555 
 
 
-
 
NC_007493  RSP_2896  multidrug ABC transporter  31.5 
 
 
206 aa  82  0.000000000000008  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_009049  Rsph17029_1540  multiple antibiotic resistance (MarC)-related proteins  31.5 
 
 
206 aa  82  0.000000000000008  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.29956  normal 
 
 
-
 
NC_009952  Dshi_1348  multiple antibiotic resistance (MarC)-related protein  35.29 
 
 
208 aa  81.6  0.000000000000009  Dinoroseobacter shibae DFL 12  Bacteria  normal  normal  0.160191 
 
 
-
 
NC_009831  Ssed_2348  hypothetical protein  29.95 
 
 
210 aa  81.6  0.000000000000009  Shewanella sediminis HAW-EB3  Bacteria  normal  0.0647314  hitchhiker  0.000000838099 
 
 
-
 
NC_011206  Lferr_0055  multiple antibiotic resistance (MarC)-related protein  30 
 
 
218 aa  81.6  0.000000000000009  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  0.0468967  normal  0.907646 
 
 
-
 
NC_009656  PSPA7_5951  multiple drug resistance protein MarC  31.36 
 
 
232 aa  81.6  0.00000000000001  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_011761  AFE_0054  integral membrane protein, MarC family  30 
 
 
216 aa  81.6  0.00000000000001  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  0.207585  n/a   
 
 
-
 
NC_009505  BOV_1059  hypothetical protein  28.77 
 
 
209 aa  80.9  0.00000000000002  Brucella ovis ATCC 25840  Bacteria  normal  0.728304  n/a   
 
 
-
 
NC_009708  YpsIP31758_1962  hypothetical protein  27.36 
 
 
214 aa  80.9  0.00000000000002  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_010084  Bmul_0331  multiple antibiotic resistance (MarC)-related protein  28.78 
 
 
206 aa  80.5  0.00000000000002  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
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