| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A1875 |
|---|
| Symbol | |
|---|
| ID | 6486545 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011080 |
|---|
| Strand | - |
|---|
| Start bp | 1838346 |
|---|
| End bp | 1838993 |
|---|
| Gene Length | 648 bp |
|---|
| Protein Length | 215 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 642737248 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002041000 |
|---|
| Protein GI | 194445834 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG2095] Multiple antibiotic transporter |
|---|
| TIGRFAM ID | [TIGR00427] membrane protein, MarC family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.67019 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 78 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGATTCAAC CGCTTTTTGA TTTTCCTGTT TACTTTAAGT TCTTTATCGG GCTCTTTGCG
CTGGTTAACC CGGTGGGGAT TATCCCCGTT TTCATCAGCA TGACCAGCTA CCAGACGGCC
ACGGCGCGTA ATAAAACTAA CCTCACCGCG AATCTGTCGG TTGCGATTAT CTTGTGGAGT
TCCTTATTCC TCGGCGATGG CATCCTGCAG CTGTTTGGTA TTTCTATTGA CTCGTTCAGA
ATTGCGGGCG GTATCCTGGT TGTCACCATT GCAATGTCGA TGATCAGCGG GAAGCTGGGG
GAAGATAAAC AAAACAAGCA AGAAAAGTCA GAGACGGCCA TACGCGAGAG CATTGGCGTT
GTGCCGTTAG CGCTGCCGTT AATGGCGGGG CCAGGGGCGA TTAGCTCCAC TATCGTCTGG
GGGACGCGTT ATCACAGCAT CGCGCATTTG CTTGGCTTTT CAGTTGCCAT TGCGCTTTTT
GCGCTTTGCT GCTGGGGCGT GTTCCGTATG GCACCGTGGC TGGTTCGTTT GCTGGGGCAA
ACCGGTATCA ACGTTATTAC CCGAATCATG GGGTTGTTGT TAATGGCGCT CGGCATCGAA
TTTATTGTCA CAGGAATAAA AGGCATTTTC CCCGGCTTGC TCAACTAA
|
|---|
| Protein sequence | MIQPLFDFPV YFKFFIGLFA LVNPVGIIPV FISMTSYQTA TARNKTNLTA NLSVAIILWS
SLFLGDGILQ LFGISIDSFR IAGGILVVTI AMSMISGKLG EDKQNKQEKS ETAIRESIGV
VPLALPLMAG PGAISSTIVW GTRYHSIAHL LGFSVAIALF ALCCWGVFRM APWLVRLLGQ
TGINVITRIM GLLLMALGIE FIVTGIKGIF PGLLN
|
|---|
| |