Gene SeD_A1814 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A1814 
Symbol 
ID6873700 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp1760398 
End bp1761063 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content53% 
IMG OID642784948 
Productmultiple drug resistance protein MarC 
Protein accessionYP_002215616 
Protein GI198244957 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG2095] Multiple antibiotic transporter 
TIGRFAM ID[TIGR00427] membrane protein, MarC family 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones100 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGGATT TGTTTAAAGC GATTGGATTG GGGCTGGTCG TACTGCTCCC GTTAGCCAAT 
CCGCTAACCA CCGTGGCGCT GTTTCTTGGC CTTGCGGGCA ATATGAATAG TGCGGAACGC
AACCGGCAGT CCTATATGGC TTCGGTTTAT GTCTTCGCTA TTATGATGGT GGCGTACTAC
GCCGGGCAGT TAGTTATGAA CACCTTCGGT ATTTCGATTC CAGGGCTACG GATCGCCGGG
GGGTTAATCG TGGCGTTTAT CGGCTTCAGA ATGCTTTTCC CGCAGCAGAA GGCGCATGAG
TCGCCGGAAG CGAAAAGCAA ATCGGAGGAG CTGGCAGACG AACCGACGGC TAATATTGCA
TTTGTTCCAC TGGCTATGCC AAGCACCGCA GGACCGGGGA CCATCGCAAT GATCATCAGT
TCCGCTTCCA CGGTGCGTCA TGGCGGCGAG TTTCCCGACT GGGTCATTAT GGTCGCGCCG
CCGATTATTT TTTTTGCCGT GGCGGTGATC CTGTGGGGAT GCTTACGCAG TTCTGGCGCT
ATTATGCGGC TGGTGGGTAA AGGGGGGATT GAAGCGATCT CCCGCTTAAT GGGATTCCTG
CTGGTGTGTA TGGGCGTGCA ATTTATTATC AACGGCGTGT TGGAAATTAT TAAAACGTAC
CACTAA
 
Protein sequence
MMDLFKAIGL GLVVLLPLAN PLTTVALFLG LAGNMNSAER NRQSYMASVY VFAIMMVAYY 
AGQLVMNTFG ISIPGLRIAG GLIVAFIGFR MLFPQQKAHE SPEAKSKSEE LADEPTANIA
FVPLAMPSTA GPGTIAMIIS SASTVRHGGE FPDWVIMVAP PIIFFAVAVI LWGCLRSSGA
IMRLVGKGGI EAISRLMGFL LVCMGVQFII NGVLEIIKTY H