| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_0936 |
|---|
| Symbol | |
|---|
| ID | 6204925 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Opitutus terrae PB90-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010571 |
|---|
| Strand | + |
|---|
| Start bp | 1152291 |
|---|
| End bp | 1152968 |
|---|
| Gene Length | 678 bp |
|---|
| Protein Length | 225 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 641690559 |
|---|
| Product | multiple antibiotic resistance (MarC)-related protein |
|---|
| Protein accession | YP_001817824 |
|---|
| Protein GI | 182412758 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG2095] Multiple antibiotic transporter |
|---|
| TIGRFAM ID | [TIGR00427] membrane protein, MarC family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.19439 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCTCCG CGCATCATTT CTGGGAACTG ATCCTCGGCA CCGTCATTGC GCTGCTGCCG
CTGATCAATC CGCTCGCCTC CGCACCGACG TTTCTCGCCA TCACCGACGG CGACACCCCG
GAACGTCGCA ACCAGCAGCT TCGGATGGCG TGCCTCTACA CGGTCGGCAT CCTGGTCAGC
TTCCTGATCG GCGGGACGTT CATCATGGGT TTCTTCGGAC TCTCGATCCC CGGCCTGCGG
ATCGCCGGCG GCTTGCTCGT CGCGGGCATC GGATCGCACA TGTTGATGTC CCCGCCGAAG
CCGGCCACGG ATGATCCGGT GCACGCCGCG GCGCGCGCGA AGCGCGACAT CTCGTTTTCG
CCGCTCGCCA TGCCGATGAT GAGCGGCCCT GGCTCGATCG CCGCGACGAT CAGCTTCACC
TCACTGGCGC GCGGCTGGAT CGACTACGTC GCGATCATCC TCGGCATCAT CATCGTCACC
GTGATCACTT ACGTGACGTT GCGGATTTCC GATCGCGTCG TGCGCGTCGT CGGCTTCAAC
AGCATGAACG CGCTCTCGCA GGTCATGGGC TTCCTGATCC TCTGCATCGG CATCCAGTTC
GTCGTGAACG GTGTCACTGA AATCGTGACC GATCCCGTCC TGCTCGGCAG CATCCGCGAC
GCGTTCCAGC AGTCGTGA
|
|---|
| Protein sequence | MPSAHHFWEL ILGTVIALLP LINPLASAPT FLAITDGDTP ERRNQQLRMA CLYTVGILVS
FLIGGTFIMG FFGLSIPGLR IAGGLLVAGI GSHMLMSPPK PATDDPVHAA ARAKRDISFS
PLAMPMMSGP GSIAATISFT SLARGWIDYV AIILGIIIVT VITYVTLRIS DRVVRVVGFN
SMNALSQVMG FLILCIGIQF VVNGVTEIVT DPVLLGSIRD AFQQS
|
|---|
| |