Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_4420 |
Symbol | |
ID | 6181374 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010552 |
Strand | - |
Start bp | 1504032 |
End bp | 1504703 |
Gene Length | 672 bp |
Protein Length | 223 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641684181 |
Product | multiple antibiotic resistance (MarC)-related protein |
Protein accession | YP_001811092 |
Protein GI | 172063441 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG2095] Multiple antibiotic transporter |
TIGRFAM ID | [TIGR00427] membrane protein, MarC family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.314692 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATCGTCG ACCGCCTTAT CTCCGAGATC CTGTTCGGCT TCACCGGCCT GATCGGCATC ATCAATCCGA TCGGCATTGC ATTCCTGTTT CTCGAACGCA CCGAGGCGCT GACCGAGCCC GAACGGAACC TGCTCGCGAA GAAGGTGGCG TTCAACGCAT TCATCGTGTT GCTGGTCGCA TTCTTCGCCG GCACGCCGGT GCTGCATTTC TTCGGGATCT CGATGGAAGC GCTGCGGATT GGCGGCGGCT TCGCGGTCGC CGTCGCGGGC TGGCAGATGC TCAACGAGCC GGACGGCCCG GGCGGCGGCG ACACGCCCGT CAAGCCGATC GACGCGAACG CAATCATGAC CCGCGCGTTC TTCCCGCTGA CGGTGCCGCT GACGGTCGGC CCCGGTTCGA TCGCCACCGC GATCGCGCTG AACGCGAACC GCACGCACAA GCTGTCGGAA TTCATGCTGT CGAGCATCGT GTCGATCGCG GTGTCCGCGC TTGTCGCGGT CGTGATCTGG CTGACCTACA GCCGCGCCGC GCTGCTGTCG CGCTATCTCG GCATCGAAGG CACCAAGGTC GCGAAGCGCG TGTCCGCGTT CCTGCTGCTG TGCATCGGCG TGCAGATCAT GCTGACCGGG TTCTCCGAGT TCCTGCGGCC GCTCGCCGAC CAGATCAAGT AA
|
Protein sequence | MIVDRLISEI LFGFTGLIGI INPIGIAFLF LERTEALTEP ERNLLAKKVA FNAFIVLLVA FFAGTPVLHF FGISMEALRI GGGFAVAVAG WQMLNEPDGP GGGDTPVKPI DANAIMTRAF FPLTVPLTVG PGSIATAIAL NANRTHKLSE FMLSSIVSIA VSALVAVVIW LTYSRAALLS RYLGIEGTKV AKRVSAFLLL CIGVQIMLTG FSEFLRPLAD QIK
|
| |