Gene BamMC406_4420 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_4420 
Symbol 
ID6181374 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010552 
Strand
Start bp1504032 
End bp1504703 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content64% 
IMG OID641684181 
Productmultiple antibiotic resistance (MarC)-related protein 
Protein accessionYP_001811092 
Protein GI172063441 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG2095] Multiple antibiotic transporter 
TIGRFAM ID[TIGR00427] membrane protein, MarC family 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.314692 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGTCG ACCGCCTTAT CTCCGAGATC CTGTTCGGCT TCACCGGCCT GATCGGCATC 
ATCAATCCGA TCGGCATTGC ATTCCTGTTT CTCGAACGCA CCGAGGCGCT GACCGAGCCC
GAACGGAACC TGCTCGCGAA GAAGGTGGCG TTCAACGCAT TCATCGTGTT GCTGGTCGCA
TTCTTCGCCG GCACGCCGGT GCTGCATTTC TTCGGGATCT CGATGGAAGC GCTGCGGATT
GGCGGCGGCT TCGCGGTCGC CGTCGCGGGC TGGCAGATGC TCAACGAGCC GGACGGCCCG
GGCGGCGGCG ACACGCCCGT CAAGCCGATC GACGCGAACG CAATCATGAC CCGCGCGTTC
TTCCCGCTGA CGGTGCCGCT GACGGTCGGC CCCGGTTCGA TCGCCACCGC GATCGCGCTG
AACGCGAACC GCACGCACAA GCTGTCGGAA TTCATGCTGT CGAGCATCGT GTCGATCGCG
GTGTCCGCGC TTGTCGCGGT CGTGATCTGG CTGACCTACA GCCGCGCCGC GCTGCTGTCG
CGCTATCTCG GCATCGAAGG CACCAAGGTC GCGAAGCGCG TGTCCGCGTT CCTGCTGCTG
TGCATCGGCG TGCAGATCAT GCTGACCGGG TTCTCCGAGT TCCTGCGGCC GCTCGCCGAC
CAGATCAAGT AA
 
Protein sequence
MIVDRLISEI LFGFTGLIGI INPIGIAFLF LERTEALTEP ERNLLAKKVA FNAFIVLLVA 
FFAGTPVLHF FGISMEALRI GGGFAVAVAG WQMLNEPDGP GGGDTPVKPI DANAIMTRAF
FPLTVPLTVG PGSIATAIAL NANRTHKLSE FMLSSIVSIA VSALVAVVIW LTYSRAALLS
RYLGIEGTKV AKRVSAFLLL CIGVQIMLTG FSEFLRPLAD QIK