| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A0654 |
|---|
| Symbol | |
|---|
| ID | 3834292 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodospirillum rubrum ATCC 11170 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007643 |
|---|
| Strand | - |
|---|
| Start bp | 774349 |
|---|
| End bp | 775002 |
|---|
| Gene Length | 654 bp |
|---|
| Protein Length | 217 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637824738 |
|---|
| Product | multiple drug resistance protein MarC |
|---|
| Protein accession | YP_425745 |
|---|
| Protein GI | 83591993 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG2095] Multiple antibiotic transporter |
|---|
| TIGRFAM ID | [TIGR00427] membrane protein, MarC family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.65395 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATTATT TCGGCCTTGC CGCGAAATAC ATTCCCTTCG TCACGCTCGG ATTGCTGCCG
ATCATGAATC CGCTAAGCAC CGTGCCGCTG TTTCTGGAAT TGACCAAGCG CATGTCGCCC
GAGCGCAAGC ACCAGCAGGC GCGCCGGGCC TGTCTTTACG CCCTGTCGAT TCTCGCCGTG
TTCTTGTTCA TCGGCAACGG CATCATCACG CTGTTTGGCA TCTCGCTGGC CGGCATCCGG
GTGGCCGGCG GGCTGATCAT TCTGGTGCTG GCCTTCCGCA TGCTGTTCTC GGGCGAAGGC
GAAGAAGCCT CGATCGAAAC GGAAGCCACC GAGATCAAGC GCGCCAACCT CGATTTCTCG
TTCTCTCCGT TGGCCATGCC CAGCCTCGCC GGCCCGGGAT CGATCGCCGT GGTCATGAGC
TACGGCTCGC AGATCCCCGA TGACGCCCTG GTCTTTGGCC ATTTCATCGT CATCTGCGGC
ATCTCGATCA CCGTGCTCAT CGCCTATATC GCCCTTGCCG GCTCGGCCTG GATCGCCAAA
TTCCTCGGCG AGCACGGCAT TCAGGCGGTC ACCAAGATCA TGGGCTTTCT GCTGACCTGC
ATCGCCGTCC AGTTCATCGC CTCGGGCATC CGCGATTTCT CGCAAACCCT GTAG
|
|---|
| Protein sequence | MDYFGLAAKY IPFVTLGLLP IMNPLSTVPL FLELTKRMSP ERKHQQARRA CLYALSILAV
FLFIGNGIIT LFGISLAGIR VAGGLIILVL AFRMLFSGEG EEASIETEAT EIKRANLDFS
FSPLAMPSLA GPGSIAVVMS YGSQIPDDAL VFGHFIVICG ISITVLIAYI ALAGSAWIAK
FLGEHGIQAV TKIMGFLLTC IAVQFIASGI RDFSQTL
|
|---|
| |