More than 300 homologs were found in PanDaTox collection
for query gene CPS_1844 on replicon NC_003910
Organism: Colwellia psychrerythraea 34H



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_003910  CPS_1844  hypothetical protein  100 
 
 
207 aa  407  1e-113  Colwellia psychrerythraea 34H  Bacteria  normal  0.678437  n/a   
 
 
-
 
NC_008228  Patl_0612  multiple antibiotic resistance (MarC)-related proteins  74.51 
 
 
208 aa  308  2.9999999999999997e-83  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_2943  multiple antibiotic resistance (MarC)-related protein  73.04 
 
 
205 aa  301  5.000000000000001e-81  Marinomonas sp. MWYL1  Bacteria  normal  normal  0.434605 
 
 
-
 
NC_009901  Spea_2978  multiple antibiotic resistance (MarC)-related protein  51.89 
 
 
212 aa  221  8e-57  Shewanella pealeana ATCC 700345  Bacteria  hitchhiker  0.000715801  n/a   
 
 
-
 
NC_013422  Hneap_0571  multiple antibiotic resistance (MarC)-related protein  51.92 
 
 
214 aa  218  3.9999999999999997e-56  Halothiobacillus neapolitanus c2  Bacteria  normal  n/a   
 
 
-
 
NC_009784  VIBHAR_06663  hypothetical protein  50.24 
 
 
220 aa  214  9e-55  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_013457  VEA_001122  multiple antibiotic resistance protein marC  52.22 
 
 
213 aa  211  7e-54  Vibrio sp. Ex25  Bacteria  hitchhiker  0.00063359  n/a   
 
 
-
 
NC_009831  Ssed_3316  multiple antibiotic resistance protein  50.7 
 
 
219 aa  211  9e-54  Shewanella sediminis HAW-EB3  Bacteria  normal  normal  0.0229288 
 
 
-
 
NC_004116  SAG2143  hypothetical protein  49.47 
 
 
203 aa  173  1.9999999999999998e-42  Streptococcus agalactiae 2603V/R  Bacteria  normal  0.0929738  n/a   
 
 
-
 
NC_010831  Cphamn1_0155  multiple antibiotic resistance (MarC)-related protein  39.61 
 
 
215 aa  164  9e-40  Chlorobium phaeobacteroides BS1  Bacteria  normal  normal 
 
 
-
 
NC_008255  CHU_1407  hypothetical protein  38.83 
 
 
210 aa  138  4.999999999999999e-32  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  0.0713518  normal  0.681505 
 
 
-
 
NC_009634  Mevan_1278  multiple antibiotic resistance (MarC)-related protein  35.64 
 
 
212 aa  131  7.999999999999999e-30  Methanococcus vannielii SB  Archaea  normal  n/a   
 
 
-
 
NC_011891  A2cp1_1917  multiple antibiotic resistance (MarC)-related protein  32.21 
 
 
211 aa  126  3e-28  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  0.0692726  n/a   
 
 
-
 
NC_011145  AnaeK_1832  multiple antibiotic resistance (MarC)-related protein  32.21 
 
 
211 aa  126  3e-28  Anaeromyxobacter sp. K  Bacteria  normal  0.475063  n/a   
 
 
-
 
NC_011662  Tmz1t_0417  multiple antibiotic resistance (MarC)-related protein  34.98 
 
 
202 aa  122  5e-27  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_010581  Bind_3347  multiple drug resistance protein MarC  34.12 
 
 
217 aa  120  9.999999999999999e-27  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  normal  0.123982 
 
 
-
 
NC_009080  BMA10247_2762  MarC membrane protein  33.66 
 
 
206 aa  118  4.9999999999999996e-26  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_006348  BMA2711  MarC membrane protein  33.66 
 
 
206 aa  118  4.9999999999999996e-26  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_008836  BMA10229_A1791  MarC membrane protein  33.66 
 
 
206 aa  118  4.9999999999999996e-26  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_007434  BURPS1710b_3690  hypothetical protein  33.66 
 
 
206 aa  118  4.9999999999999996e-26  Burkholderia pseudomallei 1710b  Bacteria  normal  0.984937  n/a   
 
 
-
 
NC_009076  BURPS1106A_3721  MarC membrane protein  33.66 
 
 
206 aa  118  4.9999999999999996e-26  Burkholderia pseudomallei 1106a  Bacteria  normal  0.596949  n/a   
 
 
-
 
NC_007651  BTH_I2990  hypothetical protein  33.66 
 
 
206 aa  118  4.9999999999999996e-26  Burkholderia thailandensis E264  Bacteria  normal  0.792349  n/a   
 
 
-
 
NC_008785  BMASAVP1_A3242  MarC membrane protein  33.66 
 
 
206 aa  118  4.9999999999999996e-26  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_009074  BURPS668_3663  MarC membrane protein  33.66 
 
 
206 aa  118  4.9999999999999996e-26  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_009135  MmarC5_1406  multiple antibiotic resistance (MarC)-related protein  33.82 
 
 
213 aa  117  9.999999999999999e-26  Methanococcus maripaludis C5  Archaea  normal  n/a   
 
 
-
 
NC_007760  Adeh_2046  multiple antibiotic resistance (MarC)-related proteins  31.73 
 
 
211 aa  117  9.999999999999999e-26  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_013889  TK90_0587  multiple antibiotic resistance (MarC)-related protein  34.3 
 
 
235 aa  117  9.999999999999999e-26  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal  0.0123495 
 
 
-
 
NC_009635  Maeo_1199  multiple antibiotic resistance (MarC)-related protein  36.87 
 
 
217 aa  117  1.9999999999999998e-25  Methanococcus aeolicus Nankai-3  Archaea  normal  n/a   
 
 
-
 
NC_010084  Bmul_0331  multiple antibiotic resistance (MarC)-related protein  32.18 
 
 
206 aa  116  1.9999999999999998e-25  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_010681  Bphyt_3557  multiple antibiotic resistance (MarC)-related protein  32.67 
 
 
206 aa  115  3.9999999999999997e-25  Burkholderia phytofirmans PsJN  Bacteria  normal  0.247513  hitchhiker  0.0000492857 
 
 
-
 
NC_007498  Pcar_0161  hypothetical protein  33.65 
 
 
210 aa  115  5e-25  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_010506  Swoo_2242  hypothetical protein  34.91 
 
 
212 aa  115  5e-25  Shewanella woodyi ATCC 51908  Bacteria  normal  0.177472  normal  0.0116098 
 
 
-
 
NC_007954  Sden_1910  hypothetical protein  34.16 
 
 
207 aa  115  6e-25  Shewanella denitrificans OS217  Bacteria  hitchhiker  0.000000443138  n/a   
 
 
-
 
NC_010551  BamMC406_0355  multiple antibiotic resistance (MarC)-related protein  31.68 
 
 
206 aa  114  7.999999999999999e-25  Burkholderia ambifaria MC40-6  Bacteria  normal  normal  0.458882 
 
 
-
 
NC_010622  Bphy_2756  multiple antibiotic resistance (MarC)-related protein  33.67 
 
 
206 aa  114  7.999999999999999e-25  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_013946  Mrub_2097  multiple antibiotic resistance (MarC)-related protein  29.41 
 
 
206 aa  114  7.999999999999999e-25  Meiothermus ruber DSM 1279  Bacteria  normal  normal 
 
 
-
 
NC_009975  MmarC6_0686  multiple antibiotic resistance (MarC)-related protein  32.66 
 
 
213 aa  114  1.0000000000000001e-24  Methanococcus maripaludis C6  Archaea  normal  n/a   
 
 
-
 
NC_014212  Mesil_1323  multiple antibiotic resistance (MarC)-related protein  33.17 
 
 
204 aa  114  1.0000000000000001e-24  Meiothermus silvanus DSM 9946  Bacteria  normal  normal  0.199618 
 
 
-
 
NC_008390  Bamb_0346  multiple antibiotic resistance (MarC)-related proteins  31.68 
 
 
206 aa  114  1.0000000000000001e-24  Burkholderia ambifaria AMMD  Bacteria  normal  0.383588  n/a   
 
 
-
 
NC_009051  Memar_0498  multiple antibiotic resistance (MarC)-related protein  37.37 
 
 
219 aa  114  1.0000000000000001e-24  Methanoculleus marisnigri JR1  Archaea  normal  n/a   
 
 
-
 
NC_010531  Pnec_0784  multiple antibiotic resistance (MarC)-related protein  32.69 
 
 
224 aa  113  2.0000000000000002e-24  Polynucleobacter necessarius subsp. necessarius STIR1  Bacteria  normal  normal 
 
 
-
 
NC_009438  Sputcn32_1812  hypothetical protein  34.93 
 
 
210 aa  113  2.0000000000000002e-24  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_010508  Bcenmc03_0407  multiple antibiotic resistance (MarC)-related protein  31.19 
 
 
206 aa  113  2.0000000000000002e-24  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal  0.190902 
 
 
-
 
NC_009637  MmarC7_1270  multiple antibiotic resistance (MarC)-related protein  32.67 
 
 
213 aa  113  2.0000000000000002e-24  Methanococcus maripaludis C7  Archaea  normal  normal 
 
 
-
 
NC_007951  Bxe_A0401  MarC family multiple antibiotic resistance protein  32.67 
 
 
206 aa  113  2.0000000000000002e-24  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_011832  Mpal_1556  multiple antibiotic resistance (MarC)-related protein  35.68 
 
 
216 aa  113  2.0000000000000002e-24  Methanosphaerula palustris E1-9c  Archaea  normal  normal 
 
 
-
 
NC_008321  Shewmr4_1684  hypothetical protein  34.45 
 
 
210 aa  113  2.0000000000000002e-24  Shewanella sp. MR-4  Bacteria  normal  0.197685  normal  0.181239 
 
 
-
 
NC_008577  Shewana3_1789  hypothetical protein  34.45 
 
 
210 aa  113  2.0000000000000002e-24  Shewanella sp. ANA-3  Bacteria  normal  0.153384  normal  0.0804929 
 
 
-
 
NC_008700  Sama_1694  hypothetical protein  34.91 
 
 
210 aa  113  2.0000000000000002e-24  Shewanella amazonensis SB2B  Bacteria  normal  normal  0.0657108 
 
 
-
 
NC_007510  Bcep18194_A3526  multiple antibiotic resistance (MarC)-related proteins  31.19 
 
 
206 aa  112  3e-24  Burkholderia sp. 383  Bacteria  normal  0.303666  normal  0.286765 
 
 
-
 
NC_008148  Rxyl_0955  multiple antibiotic resistance (MarC)-related proteins  31.68 
 
 
205 aa  112  3e-24  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_004347  SO_2137  hypothetical protein  34.45 
 
 
210 aa  112  4.0000000000000004e-24  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_011757  Mchl_5252  multiple antibiotic resistance (MarC)-related protein  33.17 
 
 
213 aa  112  4.0000000000000004e-24  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.450326  normal  0.732321 
 
 
-
 
NC_008322  Shewmr7_1759  hypothetical protein  33.97 
 
 
210 aa  112  4.0000000000000004e-24  Shewanella sp. MR-7  Bacteria  normal  0.0131249  normal  0.465228 
 
 
-
 
NC_008553  Mthe_1410  multiple antibiotic resistance (MarC)-related proteins  35.12 
 
 
231 aa  112  4.0000000000000004e-24  Methanosaeta thermophila PT  Archaea  normal  n/a   
 
 
-
 
NC_010682  Rpic_3226  multiple antibiotic resistance (MarC)-related protein  32.66 
 
 
207 aa  112  4.0000000000000004e-24  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_007644  Moth_1933  multiple antibiotic resistance (MarC)-related proteins  35.85 
 
 
210 aa  112  5e-24  Moorella thermoacetica ATCC 39073  Bacteria  hitchhiker  0.00000000193827  hitchhiker  0.0000682503 
 
 
-
 
NC_008060  Bcen_2679  multiple antibiotic resistance (MarC)-related proteins  30.69 
 
 
206 aa  111  7.000000000000001e-24  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.356849  n/a   
 
 
-
 
NC_008542  Bcen2424_0428  multiple antibiotic resistance (MarC)-related proteins  30.69 
 
 
206 aa  111  7.000000000000001e-24  Burkholderia cenocepacia HI2424  Bacteria  normal  n/a   
 
 
-
 
NC_010172  Mext_4785  multiple antibiotic resistance (MarC)-related protein  33.65 
 
 
213 aa  111  9e-24  Methylobacterium extorquens PA1  Bacteria  normal  0.162666  normal 
 
 
-
 
NC_003295  RSc2949  hypothetical protein  31.66 
 
 
207 aa  110  1.0000000000000001e-23  Ralstonia solanacearum GMI1000  Bacteria  normal  0.514078  normal 
 
 
-
 
NC_009524  PsycPRwf_1961  multiple antibiotic resistance (MarC)-related protein  30.66 
 
 
213 aa  110  1.0000000000000001e-23  Psychrobacter sp. PRwf-1  Bacteria  normal  normal 
 
 
-
 
NC_011663  Sbal223_2370  hypothetical protein  33.97 
 
 
210 aa  110  2.0000000000000002e-23  Shewanella baltica OS223  Bacteria  normal  0.0117247  normal  0.036415 
 
 
-
 
NC_009997  Sbal195_1956  hypothetical protein  33.97 
 
 
210 aa  110  2.0000000000000002e-23  Shewanella baltica OS195  Bacteria  normal  normal  0.466227 
 
 
-
 
NC_007509  Bcep18194_C7011  multiple antibiotic resistance (MarC)-related proteins  37.5 
 
 
212 aa  110  2.0000000000000002e-23  Burkholderia sp. 383  Bacteria  normal  0.0559701  normal 
 
 
-
 
NC_009052  Sbal_1923  hypothetical protein  33.97 
 
 
210 aa  110  2.0000000000000002e-23  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_009665  Shew185_1949  hypothetical protein  33.97 
 
 
210 aa  110  2.0000000000000002e-23  Shewanella baltica OS185  Bacteria  normal  0.0303133  n/a   
 
 
-
 
NC_009428  Rsph17025_1125  multiple antibiotic resistance (MarC)-related protein  29.8 
 
 
207 aa  109  2.0000000000000002e-23  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal  0.0974003 
 
 
-
 
NC_009901  Spea_2045  hypothetical protein  34.65 
 
 
207 aa  109  3e-23  Shewanella pealeana ATCC 700345  Bacteria  hitchhiker  0.00255531  n/a   
 
 
-
 
NC_009092  Shew_1911  hypothetical protein  33.97 
 
 
213 aa  109  3e-23  Shewanella loihica PV-4  Bacteria  normal  0.0139262  unclonable  0.00000197593 
 
 
-
 
NC_008044  TM1040_0953  multiple antibiotic resistance (MarC)-related proteins  33.33 
 
 
207 aa  109  3e-23  Ruegeria sp. TM1040  Bacteria  normal  0.838216  normal 
 
 
-
 
NC_010512  Bcenmc03_6025  multiple antibiotic resistance (MarC)-related protein  37.02 
 
 
212 aa  108  6e-23  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal  0.0264079 
 
 
-
 
NC_008025  Dgeo_2143  multiple antibiotic resistance (MarC)-related proteins  31.98 
 
 
214 aa  108  8.000000000000001e-23  Deinococcus geothermalis DSM 11300  Bacteria  normal  normal 
 
 
-
 
NC_011891  A2cp1_2804  multiple antibiotic resistance (MarC)-related protein  37.11 
 
 
217 aa  108  8.000000000000001e-23  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  0.0569832  n/a   
 
 
-
 
NC_008060  Bcen_1394  multiple antibiotic resistance (MarC)-related proteins  37.5 
 
 
236 aa  107  9.000000000000001e-23  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_011145  AnaeK_2709  multiple antibiotic resistance (MarC)-related protein  37.11 
 
 
217 aa  107  9.000000000000001e-23  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_008544  Bcen2424_6435  multiple antibiotic resistance (MarC)-related proteins  37.5 
 
 
236 aa  107  9.000000000000001e-23  Burkholderia cenocepacia HI2424  Bacteria  normal  normal 
 
 
-
 
NC_009483  Gura_0644  multiple antibiotic resistance (MarC)-related protein  32.18 
 
 
210 aa  107  1e-22  Geobacter uraniireducens Rf4  Bacteria  normal  0.0517184  n/a   
 
 
-
 
NC_009832  Spro_2141  multiple drug resistance protein MarC  30.85 
 
 
229 aa  106  2e-22  Serratia proteamaculans 568  Bacteria  normal  0.0214276  normal 
 
 
-
 
NC_009436  Ent638_1999  multiple drug resistance protein MarC  31.5 
 
 
221 aa  106  2e-22  Enterobacter sp. 638  Bacteria  normal  normal  0.0815668 
 
 
-
 
NC_013530  Xcel_0772  multiple antibiotic resistance (MarC)-related protein  33.01 
 
 
211 aa  106  3e-22  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_007760  Adeh_2623  multiple antibiotic resistance (MarC)-related proteins  36.6 
 
 
217 aa  105  4e-22  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_010725  Mpop_5328  multiple antibiotic resistance (MarC)-related protein  33.64 
 
 
213 aa  105  5e-22  Methylobacterium populi BJ001  Bacteria  normal  normal 
 
 
-
 
NC_011080  SNSL254_A1634  multiple drug resistance protein MarC  30.5 
 
 
221 aa  105  5e-22  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  0.760393  normal 
 
 
-
 
NC_009636  Smed_1240  multiple antibiotic resistance (MarC)-related protein  32.46 
 
 
209 aa  105  5e-22  Sinorhizobium medicae WSM419  Bacteria  normal  0.185324  normal  0.313526 
 
 
-
 
NC_011149  SeAg_B1649  multiple drug resistance protein MarC  30.5 
 
 
221 aa  105  5e-22  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  0.0716145  n/a   
 
 
-
 
NC_011083  SeHA_C1693  multiple drug resistance protein MarC  30.5 
 
 
221 aa  105  5e-22  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  normal 
 
 
-
 
NC_008309  HS_1233  hypothetical protein  33.65 
 
 
208 aa  105  5e-22  Haemophilus somnus 129PT  Bacteria  normal  n/a   
 
 
-
 
NC_011094  SeSA_A1626  multiple drug resistance protein MarC  30.5 
 
 
221 aa  105  5e-22  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  normal 
 
 
-
 
NC_009505  BOV_1059  hypothetical protein  34.15 
 
 
209 aa  105  5e-22  Brucella ovis ATCC 25840  Bacteria  normal  0.728304  n/a   
 
 
-
 
NC_011205  SeD_A1814  multiple drug resistance protein MarC  30.5 
 
 
221 aa  105  6e-22  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  normal 
 
 
-
 
NC_007355  Mbar_A3711  multiple antibiotic resistance protein  36.6 
 
 
212 aa  104  8e-22  Methanosarcina barkeri str. Fusaro  Archaea  normal  0.372343  normal 
 
 
-
 
NC_004310  BR1098  hypothetical protein  33.66 
 
 
209 aa  104  9e-22  Brucella suis 1330  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_0451  multiple antibiotic resistance (MarC)-related protein  29.85 
 
 
219 aa  104  1e-21  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_007493  RSP_2896  multidrug ABC transporter  30.05 
 
 
206 aa  104  1e-21  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_009049  Rsph17029_1540  multiple antibiotic resistance (MarC)-related proteins  30.05 
 
 
206 aa  104  1e-21  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.29956  normal 
 
 
-
 
NC_007802  Jann_1818  multiple antibiotic resistance (MarC)-related proteins  30.1 
 
 
205 aa  103  1e-21  Jannaschia sp. CCS1  Bacteria  normal  normal  0.397202 
 
 
-
 
NC_011901  Tgr7_2476  multiple antibiotic resistance (MarC)-related protein  32.54 
 
 
242 aa  103  1e-21  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_0428  multiple antibiotic resistance (MarC)-related protein  30.58 
 
 
219 aa  104  1e-21  Geobacter bemidjiensis Bem  Bacteria  normal  0.157732  n/a   
 
 
-
 
NC_012850  Rleg_1929  multiple antibiotic resistance (MarC)-related protein  31.86 
 
 
215 aa  103  1e-21  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.604403  normal 
 
 
-
 
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