Gene Spro_2141 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_2141 
Symbol 
ID5605967 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp2337567 
End bp2338256 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content56% 
IMG OID640937677 
Productmultiple drug resistance protein MarC 
Protein accessionYP_001478370 
Protein GI157370381 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG2095] Multiple antibiotic transporter 
TIGRFAM ID[TIGR00427] membrane protein, MarC family 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0214276 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGAGTA TTCTGCAGTT ATTCCAGGCC ATTGGGCTGG GTTTGGTGCT ACTGCTGCCC 
CTGGCCAACC CACTCACCAC GGTCGCGCTG TTGCTCGGTC TTTCGGGCAA TATGACGCGC
GAAGAGCGCA ACCAGCAATC GCTGATGGCA TCGGTCTATG TGTTCTTTAT CATGACGGTG
GCGTTCTATG CCGGCCAGTT GGTCATGAAC ACCTTTGGCA TCTCTATTCC CGGTTTGCGG
ATCGCCGGCG GGCTGATTGT GGCGTTTATT GGCTTTCGCA TGCTGTTCCC GCAGCAAAGT
GCGGACGAAG CTCCAGAGGT TGAGAGCAAA AGCAAAGAGC TGCGCAAAAA AACCTCGGCC
AATATCGCCT TTGTGCCACT GGCGATGCCC AGCACCGCCG GTCCGGGTAC CATTGCGATG
ATCATCAGCT CGGCATCGAG CGTCAAAGAG AACACCCTGG GATTTGCACA CTGGGTGTTG
CTGGTTGCGC CAGTGGCCAT CTTCCTGTCG GTAGCCCTGA TTTTATGGGC TTGCCTGCGC
AGCTCTGGCG CCATTATGAG GCTGGTGGGT CAAAGTGGCA TTGAGGCGAT CTCACGCCTG
ATGGGTTTCC TGCTGGTGTG TATGGGCGTG CAATTTATTA TCAACGGCAT ATTGGAGATC
ATCTCAACCT ATACCCCAGC CGTTGCCTGA
 
Protein sequence
MTSILQLFQA IGLGLVLLLP LANPLTTVAL LLGLSGNMTR EERNQQSLMA SVYVFFIMTV 
AFYAGQLVMN TFGISIPGLR IAGGLIVAFI GFRMLFPQQS ADEAPEVESK SKELRKKTSA
NIAFVPLAMP STAGPGTIAM IISSASSVKE NTLGFAHWVL LVAPVAIFLS VALILWACLR
SSGAIMRLVG QSGIEAISRL MGFLLVCMGV QFIINGILEI ISTYTPAVA