| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_A1407 |
|---|
| Symbol | |
|---|
| ID | 4904976 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 1106a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009078 |
|---|
| Strand | + |
|---|
| Start bp | 1373220 |
|---|
| End bp | 1374458 |
|---|
| Gene Length | 1239 bp |
|---|
| Protein Length | 412 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 640144512 |
|---|
| Product | MarC membrane protein |
|---|
| Protein accession | YP_001075440 |
|---|
| Protein GI | 126457529 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG2095] Multiple antibiotic transporter |
|---|
| TIGRFAM ID | [TIGR00427] membrane protein, MarC family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.758903 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGCGAC CGTCCTGCCC GGCCGGCGCG CTCGAAGCCG TCGAGACCGC GAGCCGCGAC
GAACGGCGGG CGCTGCAGCG CGCGCGCCTG AAGGGGGCGC TGCGCCGCGC GTCCGACCAT
GTCGCGCACT ACCAGCCGCT GCTTCGATGC GGCGGGCGTG CATCCGGGGA CGTCCCGAAG
ACGCTTGCCG ATCGGGCGCG CGTGCGTGCG GTAACGCGCG TCGGGATCGG GCGCGCCGTT
GCACGTCGCA AGTCATGCGC CGCCGGGTGC CAAATGCCGG ATGCCGGATG CCGGATGCAA
GGCACGAGCA GAAAGACACG AAGCACAACG CGCCGGGCCG CACGCGCGAT CGCTTCGATC
GGATCGACTC GCGGGCGCAG GCGCGCCGAG ATCCGCACGC CGCCGCGTCG GGTGTGCGGC
GTCGGCGAAG CGCCCGCCGG CGAGCGGCGG ATGAACGAGG ACGGCCGGCG CGCGGCCGTG
GCCGATGGGC GCGGGCGCGC ATGCTCTACA ATGGCGCGGC CGCGCGAGCG GCCTCCGATA
ACCCTTGTCC GTCCTTCCCG CTTCCCGATG ATCGTCGACC GCCTGATCTC CGAAATCCTG
TTCGGCTTCA CCGGCCTCAT GGGCATCATC AATCCGTTCG GCATCGCGTT CCTGTTCCTC
GAGCGCACCG AGTCGCTGAC CGAGGCGCAG CGCGCGGCGC TCGCGCGCAA GGTCGCGATC
AACGCATTCA TCGTGCTGCT CGCCGCGTTC TTCGTCGGCA CGCCGATCCT GCATTTCTTC
GGCATCTCGC TCGAGGCGCT GCGCATCGGC GGCGGCCTCG CGGTCGCGGT GGCGGGCTGG
CAGATGCTCA ACGAGCCGGA CGTGCCGACG GGCGGCGACA CCGCCGCGCA GCCCGTCGAG
CCGCGCAACG CGATGGCGCG CGCGTTCTTC CCGCTGACGA TTCCGTTGAC CACCGGCCCC
GGCTCGATCG CGACCGCGAT CGCGCTGAAC GCGAACCGCA CGCACAAGCT CTCGGAGTTC
GTGCTGTCGA GCATCGTGTC GGTCGCGGTA TCGGCGCTCG CCGCGCTCGT GATCTGGCAG
ACGTACAGTC GCGCCGCGTT TCTCGCGCGC TATCTCGGCA CCGAGGGCAC GAAGGTCGCG
ATGCGCGTGT CGGCGTTCCT GCTGCTGTGC GTCGGCGTGC AGATCATGCT CACGGGCTTC
TCCGAGTTCC TGCGGCCGAT CGCCGATCAG GTGAAGTGA
|
|---|
| Protein sequence | MTRPSCPAGA LEAVETASRD ERRALQRARL KGALRRASDH VAHYQPLLRC GGRASGDVPK
TLADRARVRA VTRVGIGRAV ARRKSCAAGC QMPDAGCRMQ GTSRKTRSTT RRAARAIASI
GSTRGRRRAE IRTPPRRVCG VGEAPAGERR MNEDGRRAAV ADGRGRACST MARPRERPPI
TLVRPSRFPM IVDRLISEIL FGFTGLMGII NPFGIAFLFL ERTESLTEAQ RAALARKVAI
NAFIVLLAAF FVGTPILHFF GISLEALRIG GGLAVAVAGW QMLNEPDVPT GGDTAAQPVE
PRNAMARAFF PLTIPLTTGP GSIATAIALN ANRTHKLSEF VLSSIVSVAV SALAALVIWQ
TYSRAAFLAR YLGTEGTKVA MRVSAFLLLC VGVQIMLTGF SEFLRPIADQ VK
|
|---|
| |