Gene EcHS_A1611 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcHS_A1611 
SymbolmarC 
ID5592685 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli HS 
KingdomBacteria 
Replicon accessionNC_009800 
Strand
Start bp1635065 
End bp1635730 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content51% 
IMG OID640920763 
Productmultiple drug resistance protein MarC 
Protein accessionYP_001458319 
Protein GI157161001 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG2095] Multiple antibiotic transporter 
TIGRFAM ID[TIGR00427] membrane protein, MarC family 


Plasmid Coverage information

Num covering plasmid clones59 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTAGATT TGTTTAAAGC AATTGGCCTG GGGCTGGTGG TGTTACTGCC GTTAGCTAAC 
CCATTAACAA CTGTCGCGTT ATTTCTTGGC CTGGCAGGCA ACATGAACAG TGCCGAACGT
AATCGTCAGT CGTTGATGGC CTCGGTGTAC GTATTTGCCA TCATGATGGT GGCGTATTAC
GCCGGGCAAC TGGTGATGGA TACATTTGGC ATTTCGATTC CCGGTCTGCG AATTGCAGGC
GGCTTAATCG TCGCGTTTAT CGGTTTTCGG ATGCTCTTTC CGCAACAGAA AGCGATTGAT
TCACCGGAGG CGAAAAGCAA GTCGGAAGAG CTGGAAGATG AACCCAGTGC CCATATTGCC
TTTGTGCCGC TAGCAATGCC AAGTACCGCT GGTCCGGGAA CCATAGCGAT GATTATTAGC
TCGGCGTCCA CAGTGCGTCA GAGTTCAACC TTCGCTGATT GGGTACTGAT GGTTGCGCCG
CCGCTGATCT TTTTCCTGGT GGCGGTTATT TTGTGGGGAA GCCTACGCAG CTCCGGCGCA
ATTATGCGGC TGGTGGGCAA GGGTGGCATT GAAGCGATCT CCCGTCTGAT GGGATTCCTG
CTGGTATGTA TGGGTGTGCA GTTTATTATT AACGGCATCC TGGAAATCAT TAAAACGTAC
CATTAA
 
Protein sequence
MLDLFKAIGL GLVVLLPLAN PLTTVALFLG LAGNMNSAER NRQSLMASVY VFAIMMVAYY 
AGQLVMDTFG ISIPGLRIAG GLIVAFIGFR MLFPQQKAID SPEAKSKSEE LEDEPSAHIA
FVPLAMPSTA GPGTIAMIIS SASTVRQSST FADWVLMVAP PLIFFLVAVI LWGSLRSSGA
IMRLVGKGGI EAISRLMGFL LVCMGVQFII NGILEIIKTY H