Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPA7_5951 |
Symbol | |
ID | 5354501 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa PA7 |
Kingdom | Bacteria |
Replicon accession | NC_009656 |
Strand | + |
Start bp | 6143773 |
End bp | 6144471 |
Gene Length | 699 bp |
Protein Length | 232 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640814994 |
Product | multiple drug resistance protein MarC |
Protein accession | YP_001351266 |
Protein GI | 152985303 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG2095] Multiple antibiotic transporter |
TIGRFAM ID | [TIGR00427] membrane protein, MarC family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGCGAAT ACTTCCATCA CGTCCTGGTC GGCCTGCTCG CCGTGCTGCC GGTGGCCAAC CCGCTGACCA GCGTCTCGCT GCTGCTCGGT CTCGGCGGCG GCCTGCCACC GGCCGAGCGC AACCGGCAGA TTCTCAAGGC CAGCCTCTAC GTGGCCCTGA TCATGCTCAT CAGCTTCTAC GGCGGCAGCC TGGTGATGCA GGTATTCGGC ATCTCCATTC CCGGCCTGCG CATCGCCGGC GGGCTGATCG TCGCCTACAT CGGCTTCACC ATGCTGTTCC CCGCCTCCAC GCCGGACGAG ACCGAGGTCC AGCACGACCT GCTGTCGGAC GAGGAGAAGA TCACCCCGCA CTTCCGCGAC CTCTCCTTCG TCCCGCTGGC CCTGCCCGGC ACCGCGGGGC CGGGAACCAT CGCCCTGGTG GTCAGCTCGG CGTCGACCCT GCAATCCACC TACGGCAGCA TTCCGCTGCC CATCCACCTG GCGGCGATCA CCGTGACCCT GCTCACCGCG CTGGTCTTCT GGATCGCCCT GCGGAGCTCC GGACGGATCA TGAGATTCCT CGGCGGATCC GGGATCGACG CCATCTCGCG GGTGGTCGGC TTCCTGCTGG TGGCGATGGG CGTGCAGTTC GTCATCAACG GCGGCTTCGA GCTGGTCGCC GGCCATGCCG CGCTTCAGGC GGCGGGGGTC AGGCAATAG
|
Protein sequence | MSEYFHHVLV GLLAVLPVAN PLTSVSLLLG LGGGLPPAER NRQILKASLY VALIMLISFY GGSLVMQVFG ISIPGLRIAG GLIVAYIGFT MLFPASTPDE TEVQHDLLSD EEKITPHFRD LSFVPLALPG TAGPGTIALV VSSASTLQST YGSIPLPIHL AAITVTLLTA LVFWIALRSS GRIMRFLGGS GIDAISRVVG FLLVAMGVQF VINGGFELVA GHAALQAAGV RQ
|
| |