Gene Aave_3885 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_3885 
Symbol 
ID4669571 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp4309407 
End bp4310108 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content67% 
IMG OID639825074 
Productmultiple antibiotic resistance (MarC)-related protein 
Protein accessionYP_972203 
Protein GI120612525 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG2095] Multiple antibiotic transporter 
TIGRFAM ID[TIGR00427] membrane protein, MarC family 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.963175 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACACTTG AACTTCTGGG CGCCTTCGGC AAGAGCTTTC TCTTCGTGAT TGCCGCGCTG 
CTGCCTATCG TGAATCCGGC CGCCACGGCG CCCATCTTCC TGGGCCTGAC CGAGGGGGCA
TCACCGACCA CGCGCGCACT GCTGGCGCGC CGCATCGCAC GCAACATGTT CTGGCTGCTG
CTGGGCGCCA TGCTGGTCGG CTCCTACGTG CTGGAGTTCT TCGGCATCTC GCTGCCCATC
GTGCGCGTGG GTGGCGGCAT GATCGTGGCA GCGACGGCCT GGCGGTTGCT GACGGCCACG
CAGGCCACGG TGGACAGCCG CACCGAACTG GCCGAGAGCT TCACGCCCGA CATGGCGCGA
CGCCAGGCTT TCTACCCGCT CACCTTTCCG GTGAGTTGCG GGCCCGGCTC GATCGCGGCG
GCCATCACGG TGGGGGTGTC GCTGGCCGAC GCGCGGCTGT CGATGTCGCT GGCGCGGATG
GGAGGTGGCG TACTGGCGCT GCTGTCCGTC GCCGTACTGC TGTACTTCGC CTTCCGCTAT
GCGCAGCAAT TGCTCAAGCC GCTCGGCGAA GCCGGCTCGG TGATCTTCCT GCGGTTGTCG
GCCTTCATCC TGCTGTGCCT GGGCGTGCAG ATCGTGTGGG ACGGCGTGTA CGAACTGGGC
GTCGCGATGT TGCGCGACGG GATGCTGCCA CTGAATTCTT GA
 
Protein sequence
MTLELLGAFG KSFLFVIAAL LPIVNPAATA PIFLGLTEGA SPTTRALLAR RIARNMFWLL 
LGAMLVGSYV LEFFGISLPI VRVGGGMIVA ATAWRLLTAT QATVDSRTEL AESFTPDMAR
RQAFYPLTFP VSCGPGSIAA AITVGVSLAD ARLSMSLARM GGGVLALLSV AVLLYFAFRY
AQQLLKPLGE AGSVIFLRLS AFILLCLGVQ IVWDGVYELG VAMLRDGMLP LNS