| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_3957 |
|---|
| Symbol | |
|---|
| ID | 4312853 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria AMMD |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008391 |
|---|
| Strand | - |
|---|
| Start bp | 854623 |
|---|
| End bp | 855348 |
|---|
| Gene Length | 726 bp |
|---|
| Protein Length | 241 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 638151799 |
|---|
| Product | multiple antibiotic resistance (MarC)-related proteins |
|---|
| Protein accession | YP_775845 |
|---|
| Protein GI | 115358707 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG2095] Multiple antibiotic transporter |
|---|
| TIGRFAM ID | [TIGR00427] membrane protein, MarC family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.571495 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGTGACC TCCGGCGCGC CGCCGGCCCC AGCCCTGATC GTTTCCTCGC CCCGATGATC
GTCGACCGCC TTATCTCCGA GATCCTGTTC GGCTTTACCG GCCTGATCGG CATCATCAAT
CCGATCGGCA TTGCATTCCT GTTTCTCGAA CGCACCGAGG CGCTGACCGA GCACGAACGG
AACCTGCTCG CGAAGAAGGT GGCGTTCAAC GCCTTCATCG TGTTGCTGGT CGCGTTCTTC
GCCGGCACGC CGGTGCTGCA TTTCTTCGGG ATCTCGATGG AAGCACTGCG GATCGGCGGC
GGCTTCGCGG TCGCCGTCGC GGGATGGCAG ATGCTCAACG AGCCGGACGG CCCGGGCGGC
GGCGACACGC CGGTCAAGCC GATCGACGCG AACGCGATCA TGACCCGCGC GTTCTTCCCG
CTGACCGTGC CGCTGACGGT CGGCCCCGGT TCGATCGCCA CCGCGATCGC GTTGAACGCG
AACCGCACGC ACAAGCTGTC GGAATTCATG CTGTCGAGCA TCGTGTCGAT CGCGGTGTCC
GCGCTCGTCG CGGTCGTGAT CTGGCTGACC TACAGCCGCG CCGCGCTGCT GTCGCGCTAT
CTCGGCATCG AAGGCACCAA GGTCGCGAAG CGCGTGTCCG CGTTCCTGCT GCTGTGCATC
GGCGTGCAGA TCATGCTGAC CGGGTTCTCC GAGTTCCTGC GGCCGCTCGC CGACCAGATC
AAGTAA
|
|---|
| Protein sequence | MRDLRRAAGP SPDRFLAPMI VDRLISEILF GFTGLIGIIN PIGIAFLFLE RTEALTEHER
NLLAKKVAFN AFIVLLVAFF AGTPVLHFFG ISMEALRIGG GFAVAVAGWQ MLNEPDGPGG
GDTPVKPIDA NAIMTRAFFP LTVPLTVGPG SIATAIALNA NRTHKLSEFM LSSIVSIAVS
ALVAVVIWLT YSRAALLSRY LGIEGTKVAK RVSAFLLLCI GVQIMLTGFS EFLRPLADQI
K
|
|---|
| |