More than 300 homologs were found in PanDaTox collection
for query gene Bind_3347 on replicon NC_010581
Organism: Beijerinckia indica subsp. indica ATCC 9039



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010581  Bind_3347  multiple drug resistance protein MarC  100 
 
 
217 aa  426  1e-118  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  normal  0.123982 
 
 
-
 
NC_007643  Rru_A0654  multiple drug resistance protein MarC  68.54 
 
 
217 aa  290  1e-77  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.65395  n/a   
 
 
-
 
NC_007947  Mfla_0450  multiple drug resistance protein MarC  63.68 
 
 
219 aa  259  3e-68  Methylobacillus flagellatus KT  Bacteria  normal  0.0439205  normal  0.59514 
 
 
-
 
NC_009832  Spro_2141  multiple drug resistance protein MarC  37.93 
 
 
229 aa  144  1e-33  Serratia proteamaculans 568  Bacteria  normal  0.0214276  normal 
 
 
-
 
NC_011094  SeSA_A1626  multiple drug resistance protein MarC  39.11 
 
 
221 aa  142  4e-33  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  normal 
 
 
-
 
NC_012917  PC1_3217  multiple drug resistance protein MarC  34.93 
 
 
224 aa  142  4e-33  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.558235  n/a   
 
 
-
 
NC_011080  SNSL254_A1634  multiple drug resistance protein MarC  39.11 
 
 
221 aa  142  4e-33  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  0.760393  normal 
 
 
-
 
NC_011083  SeHA_C1693  multiple drug resistance protein MarC  39.11 
 
 
221 aa  142  4e-33  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  normal 
 
 
-
 
NC_011149  SeAg_B1649  multiple drug resistance protein MarC  39.11 
 
 
221 aa  142  4e-33  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  0.0716145  n/a   
 
 
-
 
NC_011205  SeD_A1814  multiple drug resistance protein MarC  39.11 
 
 
221 aa  141  6e-33  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  normal 
 
 
-
 
NC_009436  Ent638_1999  multiple drug resistance protein MarC  38.12 
 
 
221 aa  141  7e-33  Enterobacter sp. 638  Bacteria  normal  normal  0.0815668 
 
 
-
 
CP001509  ECD_01486  predicted transporter  38.12 
 
 
221 aa  140  9.999999999999999e-33  Escherichia coli BL21(DE3)  Bacteria  normal  0.917527  n/a   
 
 
-
 
CP001637  EcDH1_2117  multiple antibiotic resistance (MarC)-related protein  38.12 
 
 
221 aa  140  9.999999999999999e-33  Escherichia coli DH1  Bacteria  hitchhiker  0.00000666944  n/a   
 
 
-
 
NC_012892  B21_01497  hypothetical protein  38.12 
 
 
221 aa  140  9.999999999999999e-33  Escherichia coli BL21  Bacteria  normal  0.982846  n/a   
 
 
-
 
NC_009801  EcE24377A_1731  multiple drug resistance protein MarC  38.12 
 
 
221 aa  140  9.999999999999999e-33  Escherichia coli E24377A  Bacteria  normal  n/a   
 
 
-
 
NC_013421  Pecwa_1110  multiple drug resistance protein MarC  34.45 
 
 
224 aa  140  9.999999999999999e-33  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_68750  multiple drug resistance protein MarC  38.76 
 
 
233 aa  140  9.999999999999999e-33  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_010468  EcolC_2129  multiple drug resistance protein MarC  38.12 
 
 
221 aa  139  1.9999999999999998e-32  Escherichia coli ATCC 8739  Bacteria  normal  0.430096  normal 
 
 
-
 
NC_009800  EcHS_A1611  multiple drug resistance protein MarC  38.12 
 
 
221 aa  139  1.9999999999999998e-32  Escherichia coli HS  Bacteria  normal  n/a   
 
 
-
 
NC_010658  SbBS512_E1676  multiple drug resistance protein MarC  38.69 
 
 
221 aa  140  1.9999999999999998e-32  Shigella boydii CDC 3083-94  Bacteria  normal  n/a   
 
 
-
 
NC_008255  CHU_1871  multiple antibiotic resistance protein  38.97 
 
 
218 aa  139  3e-32  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  0.126971  hitchhiker  0.00141165 
 
 
-
 
NC_010498  EcSMS35_1641  multiple drug resistance protein MarC  37.62 
 
 
221 aa  139  3e-32  Escherichia coli SMS-3-5  Bacteria  normal  normal 
 
 
-
 
NC_011353  ECH74115_2143  multiple drug resistance protein MarC  38.69 
 
 
221 aa  139  3e-32  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  0.58341  normal 
 
 
-
 
NC_010571  Oter_0936  multiple antibiotic resistance (MarC)-related protein  36.87 
 
 
225 aa  137  1e-31  Opitutus terrae PB90-1  Bacteria  normal  0.19439  normal 
 
 
-
 
NC_009656  PSPA7_5951  multiple drug resistance protein MarC  37.32 
 
 
232 aa  135  6.0000000000000005e-31  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_010159  YpAngola_A2628  multiple drug resistance protein MarC  34.83 
 
 
227 aa  132  3.9999999999999996e-30  Yersinia pestis Angola  Bacteria  hitchhiker  0.000653473  normal 
 
 
-
 
NC_010465  YPK_1817  multiple drug resistance protein MarC  34.83 
 
 
227 aa  132  3.9999999999999996e-30  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_009708  YpsIP31758_1707  multiple drug resistance protein MarC  34.83 
 
 
227 aa  131  6.999999999999999e-30  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  0.0501787  n/a   
 
 
-
 
NC_009438  Sputcn32_0451  multiple drug resistance protein MarC  38.27 
 
 
237 aa  129  3e-29  Shewanella putrefaciens CN-32  Bacteria  normal  0.986486  n/a   
 
 
-
 
NC_013456  VEA_002930  multiple antibiotic transporter  34.34 
 
 
212 aa  126  3e-28  Vibrio sp. Ex25  Bacteria  unclonable  0.0000000449619  n/a   
 
 
-
 
NC_007984  BCI_0053  multiple drug resistance protein MarC  36.23 
 
 
211 aa  125  6e-28  Baumannia cicadellinicola str. Hc (Homalodisca coagulata)  Bacteria  normal  n/a   
 
 
-
 
NC_009636  Smed_1240  multiple antibiotic resistance (MarC)-related protein  38.14 
 
 
209 aa  124  9e-28  Sinorhizobium medicae WSM419  Bacteria  normal  0.185324  normal  0.313526 
 
 
-
 
NC_010682  Rpic_3226  multiple antibiotic resistance (MarC)-related protein  35.03 
 
 
207 aa  122  4e-27  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_010622  Bphy_2756  multiple antibiotic resistance (MarC)-related protein  36.68 
 
 
206 aa  122  4e-27  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_009783  VIBHAR_03019  hypothetical protein  34.34 
 
 
212 aa  122  5e-27  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_003295  RSc2949  hypothetical protein  35.03 
 
 
207 aa  121  9.999999999999999e-27  Ralstonia solanacearum GMI1000  Bacteria  normal  0.514078  normal 
 
 
-
 
NC_003910  CPS_1844  hypothetical protein  34.12 
 
 
207 aa  120  9.999999999999999e-27  Colwellia psychrerythraea 34H  Bacteria  normal  0.678437  n/a   
 
 
-
 
NC_008060  Bcen_2679  multiple antibiotic resistance (MarC)-related proteins  36.22 
 
 
206 aa  120  1.9999999999999998e-26  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.356849  n/a   
 
 
-
 
NC_008542  Bcen2424_0428  multiple antibiotic resistance (MarC)-related proteins  36.22 
 
 
206 aa  120  1.9999999999999998e-26  Burkholderia cenocepacia HI2424  Bacteria  normal  n/a   
 
 
-
 
NC_007510  Bcep18194_A3526  multiple antibiotic resistance (MarC)-related proteins  35.68 
 
 
206 aa  119  3.9999999999999996e-26  Burkholderia sp. 383  Bacteria  normal  0.303666  normal  0.286765 
 
 
-
 
NC_010508  Bcenmc03_0407  multiple antibiotic resistance (MarC)-related protein  35.38 
 
 
206 aa  118  4.9999999999999996e-26  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal  0.190902 
 
 
-
 
NC_010524  Lcho_0187  multiple antibiotic resistance (MarC)-related protein  36 
 
 
213 aa  118  6e-26  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_006348  BMA2711  MarC membrane protein  36.22 
 
 
206 aa  117  9.999999999999999e-26  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_007434  BURPS1710b_3690  hypothetical protein  36.22 
 
 
206 aa  117  9.999999999999999e-26  Burkholderia pseudomallei 1710b  Bacteria  normal  0.984937  n/a   
 
 
-
 
NC_009901  Spea_2978  multiple antibiotic resistance (MarC)-related protein  34.11 
 
 
212 aa  117  9.999999999999999e-26  Shewanella pealeana ATCC 700345  Bacteria  hitchhiker  0.000715801  n/a   
 
 
-
 
NC_010084  Bmul_0331  multiple antibiotic resistance (MarC)-related protein  34.67 
 
 
206 aa  117  9.999999999999999e-26  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_007651  BTH_I2990  hypothetical protein  36.22 
 
 
206 aa  117  9.999999999999999e-26  Burkholderia thailandensis E264  Bacteria  normal  0.792349  n/a   
 
 
-
 
NC_009074  BURPS668_3663  MarC membrane protein  36.22 
 
 
206 aa  117  9.999999999999999e-26  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_008836  BMA10229_A1791  MarC membrane protein  36.22 
 
 
206 aa  117  9.999999999999999e-26  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_009076  BURPS1106A_3721  MarC membrane protein  36.22 
 
 
206 aa  117  9.999999999999999e-26  Burkholderia pseudomallei 1106a  Bacteria  normal  0.596949  n/a   
 
 
-
 
NC_009080  BMA10247_2762  MarC membrane protein  36.22 
 
 
206 aa  117  9.999999999999999e-26  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_008785  BMASAVP1_A3242  MarC membrane protein  36.22 
 
 
206 aa  117  9.999999999999999e-26  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_004116  SAG2143  hypothetical protein  34.02 
 
 
203 aa  116  1.9999999999999998e-25  Streptococcus agalactiae 2603V/R  Bacteria  normal  0.0929738  n/a   
 
 
-
 
NC_004310  BR1098  hypothetical protein  36.06 
 
 
209 aa  116  1.9999999999999998e-25  Brucella suis 1330  Bacteria  normal  n/a   
 
 
-
 
NC_009831  Ssed_3316  multiple antibiotic resistance protein  35.14 
 
 
219 aa  116  1.9999999999999998e-25  Shewanella sediminis HAW-EB3  Bacteria  normal  normal  0.0229288 
 
 
-
 
NC_008390  Bamb_0346  multiple antibiotic resistance (MarC)-related proteins  35.38 
 
 
206 aa  117  1.9999999999999998e-25  Burkholderia ambifaria AMMD  Bacteria  normal  0.383588  n/a   
 
 
-
 
NC_010551  BamMC406_0355  multiple antibiotic resistance (MarC)-related protein  35.71 
 
 
206 aa  116  3e-25  Burkholderia ambifaria MC40-6  Bacteria  normal  normal  0.458882 
 
 
-
 
NC_011146  Gbem_0428  multiple antibiotic resistance (MarC)-related protein  33.17 
 
 
219 aa  115  5e-25  Geobacter bemidjiensis Bem  Bacteria  normal  0.157732  n/a   
 
 
-
 
NC_011901  Tgr7_2476  multiple antibiotic resistance (MarC)-related protein  36.97 
 
 
242 aa  115  6.9999999999999995e-25  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_013889  TK90_0587  multiple antibiotic resistance (MarC)-related protein  36.49 
 
 
235 aa  115  6.9999999999999995e-25  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal  0.0123495 
 
 
-
 
NC_013457  VEA_001122  multiple antibiotic resistance protein marC  34.15 
 
 
213 aa  114  7.999999999999999e-25  Vibrio sp. Ex25  Bacteria  hitchhiker  0.00063359  n/a   
 
 
-
 
NC_012918  GM21_0451  multiple antibiotic resistance (MarC)-related protein  30.69 
 
 
219 aa  114  1.0000000000000001e-24  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_009457  VC0395_A1620  hypothetical protein  35.35 
 
 
212 aa  114  1.0000000000000001e-24  Vibrio cholerae O395  Bacteria  normal  0.079521  n/a   
 
 
-
 
NC_009505  BOV_1059  hypothetical protein  36.06 
 
 
209 aa  114  1.0000000000000001e-24  Brucella ovis ATCC 25840  Bacteria  normal  0.728304  n/a   
 
 
-
 
NC_009784  VIBHAR_06663  hypothetical protein  33.66 
 
 
220 aa  113  2.0000000000000002e-24  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_008044  TM1040_0953  multiple antibiotic resistance (MarC)-related proteins  38 
 
 
207 aa  114  2.0000000000000002e-24  Ruegeria sp. TM1040  Bacteria  normal  0.838216  normal 
 
 
-
 
NC_014230  CA2559_08146  multiple antibiotic resistance protein MarC  32.99 
 
 
204 aa  112  4.0000000000000004e-24  Croceibacter atlanticus HTCC2559  Bacteria  normal  n/a   
 
 
-
 
NC_013530  Xcel_0772  multiple antibiotic resistance (MarC)-related protein  34.65 
 
 
211 aa  112  5e-24  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_009667  Oant_2183  multiple antibiotic resistance (MarC)-related protein  37.02 
 
 
209 aa  112  6e-24  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.118995  n/a   
 
 
-
 
NC_007347  Reut_A3108  multiple antibiotic resistance (MarC)-related proteins  34.67 
 
 
207 aa  112  6e-24  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_011832  Mpal_1556  multiple antibiotic resistance (MarC)-related protein  35.53 
 
 
216 aa  111  7.000000000000001e-24  Methanosphaerula palustris E1-9c  Archaea  normal  normal 
 
 
-
 
NC_007802  Jann_1818  multiple antibiotic resistance (MarC)-related proteins  35.42 
 
 
205 aa  111  7.000000000000001e-24  Jannaschia sp. CCS1  Bacteria  normal  normal  0.397202 
 
 
-
 
NC_007951  Bxe_A0401  MarC family multiple antibiotic resistance protein  34.18 
 
 
206 aa  111  7.000000000000001e-24  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_008686  Pden_0906  multiple antibiotic resistance (MarC)-related proteins  36.73 
 
 
203 aa  111  7.000000000000001e-24  Paracoccus denitrificans PD1222  Bacteria  normal  0.201578  normal  0.0510602 
 
 
-
 
NC_009428  Rsph17025_1125  multiple antibiotic resistance (MarC)-related protein  35.6 
 
 
207 aa  110  1.0000000000000001e-23  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal  0.0974003 
 
 
-
 
NC_011989  Avi_2385  hypothetical protein  34.36 
 
 
209 aa  110  1.0000000000000001e-23  Agrobacterium vitis S4  Bacteria  normal  0.0520514  n/a   
 
 
-
 
NC_007498  Pcar_0161  hypothetical protein  31.53 
 
 
210 aa  110  2.0000000000000002e-23  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_0644  multiple antibiotic resistance (MarC)-related protein  35.75 
 
 
210 aa  109  2.0000000000000002e-23  Geobacter uraniireducens Rf4  Bacteria  normal  0.0517184  n/a   
 
 
-
 
NC_008553  Mthe_1410  multiple antibiotic resistance (MarC)-related proteins  33.33 
 
 
231 aa  110  2.0000000000000002e-23  Methanosaeta thermophila PT  Archaea  normal  n/a   
 
 
-
 
NC_008752  Aave_0319  multiple antibiotic resistance (MarC)-related protein  36.68 
 
 
211 aa  110  2.0000000000000002e-23  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_010681  Bphyt_3557  multiple antibiotic resistance (MarC)-related protein  33.67 
 
 
206 aa  109  3e-23  Burkholderia phytofirmans PsJN  Bacteria  normal  0.247513  hitchhiker  0.0000492857 
 
 
-
 
NC_012856  Rpic12D_2879  multiple antibiotic resistance (MarC)-related protein  32.65 
 
 
207 aa  109  3e-23  Ralstonia pickettii 12D  Bacteria  normal  normal  0.0513768 
 
 
-
 
NC_007973  Rmet_3245  multiple antibiotic resistance (MarC)-related proteins  34.17 
 
 
207 aa  109  3e-23  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_009441  Fjoh_0364  multiple antibiotic resistance (MarC)-related protein  31.48 
 
 
231 aa  108  5e-23  Flavobacterium johnsoniae UW101  Bacteria  normal  0.840532  n/a   
 
 
-
 
NC_008009  Acid345_0603  multiple antibiotic resistance MarC-related protein  34.12 
 
 
216 aa  108  7.000000000000001e-23  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal 
 
 
-
 
NC_012912  Dd1591_2196  hypothetical protein  31.63 
 
 
214 aa  107  1e-22  Dickeya zeae Ech1591  Bacteria  normal  0.522591  n/a   
 
 
-
 
NC_011094  SeSA_A1881  hypothetical protein  31.5 
 
 
215 aa  107  2e-22  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  normal  0.66407 
 
 
-
 
NC_007493  RSP_2896  multidrug ABC transporter  35.57 
 
 
206 aa  107  2e-22  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_011149  SeAg_B1397  hypothetical protein  31.5 
 
 
215 aa  107  2e-22  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  0.126468  n/a   
 
 
-
 
NC_011080  SNSL254_A1875  hypothetical protein  31.5 
 
 
215 aa  107  2e-22  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  0.67019  normal 
 
 
-
 
NC_011083  SeHA_C1938  hypothetical protein  31.5 
 
 
215 aa  107  2e-22  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  normal  0.476555 
 
 
-
 
NC_011205  SeD_A1580  hypothetical protein  31.5 
 
 
215 aa  107  2e-22  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  0.439502  normal 
 
 
-
 
NC_009049  Rsph17029_1540  multiple antibiotic resistance (MarC)-related proteins  35.57 
 
 
206 aa  107  2e-22  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.29956  normal 
 
 
-
 
NC_013946  Mrub_2097  multiple antibiotic resistance (MarC)-related protein  34.54 
 
 
206 aa  105  4e-22  Meiothermus ruber DSM 1279  Bacteria  normal  normal 
 
 
-
 
NC_011662  Tmz1t_0417  multiple antibiotic resistance (MarC)-related protein  33.17 
 
 
202 aa  105  5e-22  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_009524  PsycPRwf_1961  multiple antibiotic resistance (MarC)-related protein  31.36 
 
 
213 aa  105  6e-22  Psychrobacter sp. PRwf-1  Bacteria  normal  normal 
 
 
-
 
NC_009727  CBUD_1815  MarC family integral membrane protein  32.2 
 
 
197 aa  104  8e-22  Coxiella burnetii Dugway 5J108-111  Bacteria  normal  0.862942  n/a   
 
 
-
 
NC_013422  Hneap_0571  multiple antibiotic resistance (MarC)-related protein  36.14 
 
 
214 aa  104  9e-22  Halothiobacillus neapolitanus c2  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_3813  multiple antibiotic resistance (MarC)-related proteins  33.67 
 
 
206 aa  103  1e-21  Rhodoferax ferrireducens T118  Bacteria  normal  0.0677256  n/a   
 
 
-
 
NC_011992  Dtpsy_0253  multiple antibiotic resistance (MarC)-related protein  34.65 
 
 
212 aa  103  1e-21  Acidovorax ebreus TPSY  Bacteria  normal  0.592133  n/a   
 
 
-
 
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