More than 300 homologs were found in PanDaTox collection
for query gene TBFG_13874 on replicon NC_009565
Organism: Mycobacterium tuberculosis F11



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009565  TBFG_13874  transcriptional regulator  100 
 
 
137 aa  276  8e-74  Mycobacterium tuberculosis F11  Bacteria  normal  0.0355258  normal 
 
 
-
 
NC_008146  Mmcs_5038  cell envelope-related transcriptional attenuator  69.75 
 
 
311 aa  162  2.0000000000000002e-39  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_5126  cell envelope-related transcriptional attenuator  69.75 
 
 
311 aa  162  2.0000000000000002e-39  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_009077  Mjls_5418  cell envelope-related transcriptional attenuator  69.75 
 
 
311 aa  162  2.0000000000000002e-39  Mycobacterium sp. JLS  Bacteria  normal  normal  0.710746 
 
 
-
 
NC_008726  Mvan_5665  cell envelope-related transcriptional attenuator  66.39 
 
 
306 aa  156  8e-38  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.304907  normal  0.0393509 
 
 
-
 
NC_009338  Mflv_1142  cell envelope-related transcriptional attenuator  66.39 
 
 
409 aa  154  5.0000000000000005e-37  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.671395  normal  0.110733 
 
 
-
 
NC_013093  Amir_1591  cell envelope-related transcriptional attenuator  60.36 
 
 
336 aa  130  6.999999999999999e-30  Actinosynnema mirum DSM 43827  Bacteria  normal  0.230007  n/a   
 
 
-
 
NC_014165  Tbis_0046  cell envelope-related transcriptional attenuator  56.48 
 
 
320 aa  125  3e-28  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_013510  Tcur_1808  cell envelope-related transcriptional attenuator  61.26 
 
 
424 aa  122  2e-27  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0292903  n/a   
 
 
-
 
NC_013159  Svir_16350  cell envelope-related transcriptional attenuator  55.08 
 
 
307 aa  120  5e-27  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.0716913  normal  0.935262 
 
 
-
 
NC_014158  Tpau_0136  cell envelope-related transcriptional attenuator  57.8 
 
 
466 aa  120  7e-27  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_007333  Tfu_2567  cell envelope-related transcriptional attenuator  57.14 
 
 
404 aa  118  1.9999999999999998e-26  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_0120  Transcriptional regulator-like protein  56.36 
 
 
326 aa  114  6e-25  Streptosporangium roseum DSM 43021  Bacteria  normal  0.224299  normal 
 
 
-
 
NC_009664  Krad_3901  cell envelope-related transcriptional attenuator  53.7 
 
 
407 aa  112  2.0000000000000002e-24  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.0120062 
 
 
-
 
NC_014210  Ndas_3959  cell envelope-related transcriptional attenuator  48.8 
 
 
463 aa  110  5e-24  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_013169  Ksed_08470  cell envelope-related function transcriptional attenuator common domain protein  52.73 
 
 
394 aa  106  9.000000000000001e-23  Kytococcus sedentarius DSM 20547  Bacteria  normal  normal  0.282031 
 
 
-
 
NC_007333  Tfu_2542  cell envelope-related transcriptional attenuator  46.9 
 
 
509 aa  102  2e-21  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_013441  Gbro_0172  cell envelope-related function transcriptional attenuator, LytR/CpsA family  50.46 
 
 
307 aa  100  5e-21  Gordonia bronchialis DSM 43247  Bacteria  normal  0.954157  n/a   
 
 
-
 
NC_008699  Noca_1395  cell envelope-related transcriptional attenuator  46.34 
 
 
404 aa  100  5e-21  Nocardioides sp. JS614  Bacteria  normal  0.330473  n/a   
 
 
-
 
NC_014210  Ndas_3877  cell envelope-related transcriptional attenuator  47.27 
 
 
497 aa  99  2e-20  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_014165  Tbis_0717  cell envelope-related transcriptional attenuator  46.9 
 
 
504 aa  98.6  3e-20  Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.0100935 
 
 
-
 
NC_013530  Xcel_2595  cell envelope-related transcriptional attenuator  48.15 
 
 
313 aa  97.8  4e-20  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_014151  Cfla_2384  cell envelope-related transcriptional attenuator  45.22 
 
 
303 aa  96.3  1e-19  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.174416  hitchhiker  0.00797054 
 
 
-
 
NC_013131  Caci_2100  cell envelope-related transcriptional attenuator  42.86 
 
 
393 aa  96.3  1e-19  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013174  Jden_1865  cell envelope-related transcriptional attenuator  48.25 
 
 
434 aa  94  6e-19  Jonesia denitrificans DSM 20603  Bacteria  normal  normal  0.0368682 
 
 
-
 
NC_013595  Sros_1348  Transcriptional regulator-like protein  44.25 
 
 
505 aa  93.6  9e-19  Streptosporangium roseum DSM 43021  Bacteria  normal  0.958942  normal 
 
 
-
 
NC_013521  Sked_08560  cell envelope-related function transcriptional attenuator common domain protein  44.23 
 
 
434 aa  91.3  4e-18  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.511519  normal  0.633257 
 
 
-
 
NC_007644  Moth_2366  cell envelope-related transcriptional attenuator  43.52 
 
 
319 aa  88.6  3e-17  Moorella thermoacetica ATCC 39073  Bacteria  hitchhiker  0.000000181907  unclonable  0.00000001 
 
 
-
 
NC_012669  Bcav_1165  cell envelope-related protein transcriptional attenuator  49.52 
 
 
363 aa  88.6  3e-17  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_013510  Tcur_4461  cell envelope-related transcriptional attenuator  42.74 
 
 
390 aa  88.2  4e-17  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_009253  Dred_3112  cell envelope-related transcriptional attenuator  40.65 
 
 
419 aa  86.7  9e-17  Desulfotomaculum reducens MI-1  Bacteria  normal  0.0132049  n/a   
 
 
-
 
NC_013172  Bfae_20880  cell envelope-related function transcriptional attenuator common domain  42.2 
 
 
296 aa  84  7e-16  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_008148  Rxyl_1540  cell envelope-related transcriptional attenuator  42.99 
 
 
328 aa  79.3  0.00000000000002  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.112437  n/a   
 
 
-
 
NC_010424  Daud_2095  cell envelope-related transcriptional attenuator  40.35 
 
 
411 aa  78.2  0.00000000000003  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  n/a   
 
 
-
 
NC_013757  Gobs_4335  cell envelope-related transcriptional attenuator  39.84 
 
 
521 aa  78.6  0.00000000000003  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.0591559  n/a   
 
 
-
 
NC_011899  Hore_13390  cell envelope-related transcriptional attenuator  41.07 
 
 
405 aa  78.6  0.00000000000003  Halothermothrix orenii H 168  Bacteria  normal  0.557039  n/a   
 
 
-
 
NC_013172  Bfae_09330  cell envelope-related function transcriptional attenuator common domain  44.86 
 
 
349 aa  77.8  0.00000000000005  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_008148  Rxyl_0152  cell envelope-related transcriptional attenuator  42.2 
 
 
271 aa  77.4  0.00000000000006  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_013203  Apar_0187  cell envelope-related transcriptional attenuator  41.75 
 
 
563 aa  77  0.00000000000007  Atopobium parvulum DSM 20469  Bacteria  normal  normal  0.234515 
 
 
-
 
NC_009632  SaurJH1_1451  transcription attenuator LytR  35.09 
 
 
327 aa  77  0.00000000000008  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  n/a   
 
 
-
 
NC_009487  SaurJH9_1423  cell envelope-related transcriptional attenuator  35.09 
 
 
327 aa  77  0.00000000000008  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  0.302612  n/a   
 
 
-
 
NC_008726  Mvan_1726  cell envelope-related transcriptional attenuator  38.69 
 
 
493 aa  76.6  0.00000000000009  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_009664  Krad_0030  cell envelope-related transcriptional attenuator  41.32 
 
 
506 aa  76.3  0.0000000000001  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.0770441 
 
 
-
 
NC_008146  Mmcs_1318  cell envelope-related transcriptional attenuator  38.69 
 
 
490 aa  76.3  0.0000000000001  Mycobacterium sp. MCS  Bacteria  normal  0.940107  n/a   
 
 
-
 
NC_008705  Mkms_1335  cell envelope-related transcriptional attenuator  38.69 
 
 
490 aa  76.3  0.0000000000001  Mycobacterium sp. KMS  Bacteria  normal  0.962054  normal  0.634397 
 
 
-
 
NC_009077  Mjls_1354  cell envelope-related transcriptional attenuator  38.69 
 
 
490 aa  76.3  0.0000000000001  Mycobacterium sp. JLS  Bacteria  normal  0.0429862  normal  0.395159 
 
 
-
 
NC_009338  Mflv_4737  cell envelope-related transcriptional attenuator  37.23 
 
 
493 aa  76.6  0.0000000000001  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.440107  normal 
 
 
-
 
NC_013385  Adeg_1973  cell envelope-related transcriptional attenuator  39.82 
 
 
418 aa  75.1  0.0000000000003  Ammonifex degensii KC4  Bacteria  normal  0.554316  n/a   
 
 
-
 
NC_013204  Elen_3000  cell envelope-related transcriptional attenuator  41.51 
 
 
495 aa  74.7  0.0000000000004  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013174  Jden_2257  cell envelope-related transcriptional attenuator  43.4 
 
 
362 aa  74.3  0.0000000000005  Jonesia denitrificans DSM 20603  Bacteria  normal  normal  0.518809 
 
 
-
 
NC_002976  SERP0932  transcriptional regulator, putative  35.78 
 
 
329 aa  73.9  0.0000000000006  Staphylococcus epidermidis RP62A  Bacteria  normal  n/a   
 
 
-
 
NC_007777  Francci3_0712  cell envelope-related transcriptional attenuator  36.21 
 
 
573 aa  74.3  0.0000000000006  Frankia sp. CcI3  Bacteria  normal  normal 
 
 
-
 
NC_010001  Cphy_3783  cell envelope-related transcriptional attenuator  34.15 
 
 
367 aa  73.9  0.0000000000006  Clostridium phytofermentans ISDg  Bacteria  normal  0.1003  n/a   
 
 
-
 
NC_014165  Tbis_3514  cell envelope-related transcriptional attenuator  40.35 
 
 
468 aa  73.9  0.0000000000007  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_013170  Ccur_01650  cell envelope-related function transcriptional attenuator common domain protein  40.19 
 
 
512 aa  73.9  0.0000000000007  Cryptobacterium curtum DSM 15641  Bacteria  normal  0.475151  hitchhiker  0.0000000000510123 
 
 
-
 
NC_013441  Gbro_1852  cell envelope-related function transcriptional attenuator, LytR/CpsA family  38.97 
 
 
676 aa  72.8  0.000000000001  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_012803  Mlut_08810  cell envelope-related function transcriptional attenuator common domain protein  40.37 
 
 
374 aa  72.8  0.000000000001  Micrococcus luteus NCTC 2665  Bacteria  normal  0.155806  n/a   
 
 
-
 
NC_007644  Moth_1399  cell envelope-related transcriptional attenuator  37.39 
 
 
414 aa  73.2  0.000000000001  Moorella thermoacetica ATCC 39073  Bacteria  normal  normal 
 
 
-
 
NC_003909  BCE_5306  LytR family transcription antiterminator  38.33 
 
 
377 aa  72  0.000000000002  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_009565  TBFG_13296  CPSA-related protein  37.5 
 
 
497 aa  72.4  0.000000000002  Mycobacterium tuberculosis F11  Bacteria  hitchhiker  0.0000000000747689  normal 
 
 
-
 
NC_011658  BCAH187_A5364  transcription antiterminator, LytR family  38.33 
 
 
377 aa  72.4  0.000000000002  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_005945  BAS5047  LytR family transcription antiterminator  38.33 
 
 
375 aa  72  0.000000000002  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_4877  LytR family transcriptional regulator  38.33 
 
 
375 aa  72  0.000000000002  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK4892  LytR family transcriptional regulator  38.33 
 
 
375 aa  72  0.000000000002  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_010718  Nther_2377  cell envelope-related transcriptional attenuator  38.26 
 
 
344 aa  72.4  0.000000000002  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  hitchhiker  0.00145979  normal 
 
 
-
 
NC_007530  GBAA_5432  LytR family transcription antiterminator  38.33 
 
 
375 aa  72  0.000000000002  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_010001  Cphy_2795  cell envelope-related transcriptional attenuator  38.98 
 
 
424 aa  72.4  0.000000000002  Clostridium phytofermentans ISDg  Bacteria  hitchhiker  0.00000153391  n/a   
 
 
-
 
NC_005957  BT9727_4947  membrane-bound transcriptional regulator LytR  40.52 
 
 
304 aa  72  0.000000000003  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  0.0889022  n/a   
 
 
-
 
NC_012793  GWCH70_3272  membrane-bound transcriptional regulator LytR  39.29 
 
 
310 aa  71.6  0.000000000003  Geobacillus sp. WCH70  Bacteria  hitchhiker  0.000512755  n/a   
 
 
-
 
NC_014210  Ndas_0934  cell envelope-related transcriptional attenuator  39.82 
 
 
480 aa  71.6  0.000000000003  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.0202033 
 
 
-
 
NC_011773  BCAH820_5288  transcription antiterminator, LytR family  38.33 
 
 
375 aa  72  0.000000000003  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  0.00000000327862 
 
 
-
 
NC_011661  Dtur_0400  cell envelope-related transcriptional attenuator  33.9 
 
 
308 aa  71.2  0.000000000004  Dictyoglomus turgidum DSM 6724  Bacteria  hitchhiker  0.000000257107  n/a   
 
 
-
 
NC_010184  BcerKBAB4_4992  cell envelope-related transcriptional attenuator  38.84 
 
 
374 aa  70.9  0.000000000005  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_014158  Tpau_1061  cell envelope-related transcriptional attenuator  36.76 
 
 
567 aa  70.9  0.000000000006  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_013169  Ksed_03580  cell envelope-related function transcriptional attenuator common domain protein  38.26 
 
 
448 aa  70.5  0.000000000007  Kytococcus sedentarius DSM 20547  Bacteria  normal  0.742286  normal  0.880699 
 
 
-
 
NC_012793  GWCH70_3046  cell envelope-related transcriptional attenuator  35.25 
 
 
322 aa  70.5  0.000000000008  Geobacillus sp. WCH70  Bacteria  normal  0.634845  n/a   
 
 
-
 
NC_013739  Cwoe_5265  cell envelope-related transcriptional attenuator  38.53 
 
 
414 aa  70.5  0.000000000008  Conexibacter woesei DSM 14684  Bacteria  normal  normal  0.534178 
 
 
-
 
NC_007333  Tfu_2526  cell envelope-related transcriptional attenuator  37.5 
 
 
478 aa  70.1  0.000000000009  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_009921  Franean1_5902  cell envelope-related transcriptional attenuator  45.71 
 
 
625 aa  70.1  0.000000000009  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_013216  Dtox_4120  cell envelope-related transcriptional attenuator  34.45 
 
 
445 aa  70.1  0.00000000001  Desulfotomaculum acetoxidans DSM 771  Bacteria  hitchhiker  0.0000955467  unclonable  0.000000000378568 
 
 
-
 
NC_009953  Sare_5020  cell envelope-related transcriptional attenuator  40.98 
 
 
414 aa  69.7  0.00000000001  Salinispora arenicola CNS-205  Bacteria  normal  0.417569  hitchhiker  0.000783217 
 
 
-
 
NC_013170  Ccur_08290  cell envelope-related function transcriptional attenuator common domain protein  38.89 
 
 
443 aa  70.1  0.00000000001  Cryptobacterium curtum DSM 15641  Bacteria  normal  0.154905  normal  0.235154 
 
 
-
 
NC_008578  Acel_0412  cell envelope-related transcriptional attenuator  42.98 
 
 
491 aa  69.3  0.00000000001  Acidothermus cellulolyticus 11B  Bacteria  normal  0.245301  normal 
 
 
-
 
NC_009380  Strop_4510  transcription attenuator LytR  40.98 
 
 
420 aa  70.1  0.00000000001  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_1248  cell envelope-related transcriptional attenuator  35.97 
 
 
512 aa  69.3  0.00000000002  Frankia sp. EAN1pec  Bacteria  normal  0.375848  normal  0.0192244 
 
 
-
 
NC_013093  Amir_6349  cell envelope-related transcriptional attenuator  35.34 
 
 
410 aa  68.9  0.00000000002  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_014210  Ndas_0935  cell envelope-related transcriptional attenuator  35.71 
 
 
465 aa  69.3  0.00000000002  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.0761113 
 
 
-
 
NC_010320  Teth514_2233  cell envelope-related transcriptional attenuator  36.44 
 
 
303 aa  68.9  0.00000000002  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_011725  BCB4264_A5319  transcription antiterminator, LytR family  37.5 
 
 
374 aa  68.9  0.00000000002  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B5640  transcription antiterminator, LytR family  37.5 
 
 
372 aa  68.6  0.00000000002  Bacillus cereus G9842  Bacteria  normal  hitchhiker  0.00000000000247251 
 
 
-
 
NC_011725  BCB4264_A5387  membrane-bound transcriptional regulator LytR  36.84 
 
 
299 aa  69.3  0.00000000002  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_013165  Shel_01960  cell envelope-related function transcriptional attenuator common domain protein  42.99 
 
 
490 aa  68.6  0.00000000003  Slackia heliotrinireducens DSM 20476  Bacteria  hitchhiker  0.00481524  normal 
 
 
-
 
NC_013165  Shel_01950  cell envelope-related function transcriptional attenuator common domain protein  41.18 
 
 
516 aa  68.6  0.00000000003  Slackia heliotrinireducens DSM 20476  Bacteria  decreased coverage  0.000132864  normal 
 
 
-
 
NC_008262  CPR_0598  cell envelope-related function transcriptional attenuator  33.83 
 
 
337 aa  68.6  0.00000000003  Clostridium perfringens SM101  Bacteria  normal  0.195928  n/a   
 
 
-
 
NC_003909  BCE_5383  membrane-bound transcriptional regulator LytR  36.84 
 
 
302 aa  67.8  0.00000000004  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_013411  GYMC61_3385  membrane-bound transcriptional regulator LytR  37.5 
 
 
313 aa  67.8  0.00000000004  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_010001  Cphy_2794  cell envelope-related transcriptional attenuator  32.82 
 
 
476 aa  68.2  0.00000000004  Clostridium phytofermentans ISDg  Bacteria  unclonable  0.0000000218049  n/a   
 
 
-
 
NC_013093  Amir_1037  cell envelope-related transcriptional attenuator  34.13 
 
 
732 aa  67.4  0.00000000006  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_007777  Francci3_3496  cell envelope-related transcriptional attenuator  35.25 
 
 
486 aa  67.4  0.00000000006  Frankia sp. CcI3  Bacteria  normal  0.625789  normal  0.409021 
 
 
-
 
NC_008346  Swol_0125  putative transcriptional regulator  33.94 
 
 
380 aa  67.4  0.00000000006  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  hitchhiker  0.00440963  n/a   
 
 
-
 
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