31 homologs were found in PanDaTox collection
for query gene Sare_1972 on replicon NC_009953
Organism: Salinispora arenicola CNS-205



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009953  Sare_1972  CRISPR-associated Cse1 family protein  100 
 
 
495 aa  991    Salinispora arenicola CNS-205  Bacteria  normal  0.355127  normal 
 
 
-
 
NC_007333  Tfu_1592  CRISPR-associated Cse1 family protein  43.55 
 
 
549 aa  370  1e-101  Thermobifida fusca YX  Bacteria  normal  0.440854  n/a   
 
 
-
 
NC_013510  Tcur_0942  CRISPR-associated protein, Cse1 family  41.9 
 
 
722 aa  340  4e-92  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013159  Svir_17140  CRISPR-associated protein, Cse1 family  40.59 
 
 
525 aa  292  8e-78  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_013159  Svir_13870  CRISPR-associated protein, Cse1 family  36.84 
 
 
484 aa  265  1e-69  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.578004  normal  0.601258 
 
 
-
 
NC_008554  Sfum_2825  CRISPR-associated Cse1 family protein  28.85 
 
 
517 aa  125  1e-27  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_013159  Svir_17350  CRISPR-associated protein, Cse1 family  27.65 
 
 
567 aa  97.1  7e-19  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_008609  Ppro_2342  CRISPR-associated Cse1 family protein  25.99 
 
 
506 aa  91.7  2e-17  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_013946  Mrub_3019  Cse1 family CRISPR-associated protein  27.19 
 
 
516 aa  90.9  5e-17  Meiothermus ruber DSM 1279  Bacteria  decreased coverage  0.00000306277  normal  0.0835975 
 
 
-
 
NC_013526  Tter_1896  CRISPR-associated protein, Cse1 family  27.17 
 
 
533 aa  90.5  6e-17  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  0.189081  n/a   
 
 
-
 
NC_009439  Pmen_3760  CRISPR-associated Cse1 family protein  26.8 
 
 
525 aa  90.1  8e-17  Pseudomonas mendocina ymp  Bacteria  normal  normal  0.33895 
 
 
-
 
NC_012560  Avin_17180  hypothetical protein  27.97 
 
 
516 aa  90.1  8e-17  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_014212  Mesil_1230  CRISPR-associated protein, Cse1 family  26.25 
 
 
561 aa  89.4  1e-16  Meiothermus silvanus DSM 9946  Bacteria  unclonable  0.00000214368  normal  0.502097 
 
 
-
 
NC_013124  Afer_0988  CRISPR-associated protein, Cse1 family  27.87 
 
 
540 aa  81.6  0.00000000000003  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  n/a   
 
 
-
 
NC_011884  Cyan7425_4093  CRISPR-associated protein, Cse1 family  26.46 
 
 
518 aa  72.8  0.00000000001  Cyanothece sp. PCC 7425  Bacteria  normal  normal 
 
 
-
 
NC_008010  Dgeo_2630  CRISPR-associated Cse1 family protein  27.92 
 
 
573 aa  71.6  0.00000000003  Deinococcus geothermalis DSM 11300  Bacteria  normal  n/a   
 
 
-
 
NC_007777  Francci3_0018  hypothetical protein  26.7 
 
 
550 aa  66.2  0.000000001  Frankia sp. CcI3  Bacteria  normal  0.830051  normal 
 
 
-
 
NC_009523  RoseRS_0650  CRISPR-associated Cse1 family protein  25.94 
 
 
525 aa  65.9  0.000000002  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_009953  Sare_2573  CRISPR-associated Cse1 family protein  31.51 
 
 
560 aa  63.5  0.000000008  Salinispora arenicola CNS-205  Bacteria  normal  hitchhiker  0.00155149 
 
 
-
 
NC_013235  Namu_3054  CRISPR-associated protein, Cse1 family  26.23 
 
 
555 aa  60.8  0.00000005  Nakamurella multipartita DSM 44233  Bacteria  normal  0.044999  decreased coverage  0.000092711 
 
 
-
 
NC_011729  PCC7424_2439  CRISPR-associated protein, Cse1 family  24.3 
 
 
525 aa  56.2  0.000001  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_014165  Tbis_1535  Cse1 family CRISPR-associated protein  28.71 
 
 
568 aa  54.7  0.000004  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_013721  HMPREF0424_0760  CRISPR system CASCADE complex protein CasA  21.58 
 
 
556 aa  53.1  0.00001  Gardnerella vaginalis 409-05  Bacteria  n/a    normal  0.0334414 
 
 
-
 
NC_013131  Caci_3909  CRISPR-associated protein, Cse1 family  27.35 
 
 
1540 aa  51.6  0.00003  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.0587749  normal  0.0865606 
 
 
-
 
NC_011883  Ddes_0923  CRISPR-associated protein, Cse1 family  30.52 
 
 
540 aa  50.4  0.00007  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  n/a   
 
 
-
 
NC_009457  VC0395_A2671  CRISPR-associated protein, Cse1 family  29.19 
 
 
507 aa  49.3  0.0002  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_013510  Tcur_2680  CRISPR-associated protein, Cse1 family  26.13 
 
 
561 aa  47.8  0.0004  Thermomonospora curvata DSM 43183  Bacteria  hitchhiker  0.00401114  n/a   
 
 
-
 
NC_012912  Dd1591_0911  CRISPR-associated protein, Cse1 family  27.37 
 
 
507 aa  45.4  0.002  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_014210  Ndas_1281  CRISPR-associated protein, Cse1 family  28 
 
 
573 aa  45.4  0.002  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_007333  Tfu_1600  CRISPR-associated Cse1 family protein  26.99 
 
 
555 aa  44.3  0.005  Thermobifida fusca YX  Bacteria  normal  0.214237  n/a   
 
 
-
 
NC_009483  Gura_0827  CRISPR-associated Cse1 family protein  23.54 
 
 
545 aa  43.9  0.006  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>