More than 300 homologs were found in PanDaTox collection
for query gene Gura_3875 on replicon NC_009483
Organism: Geobacter uraniireducens Rf4



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009483  Gura_3875  binding-protein-dependent transport systems inner membrane component  100 
 
 
289 aa  570  1.0000000000000001e-162  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_011832  Mpal_1145  binding-protein-dependent transport systems inner membrane component  50 
 
 
279 aa  250  2e-65  Methanosphaerula palustris E1-9c  Archaea  normal  0.208956  normal 
 
 
-
 
NC_009485  BBta_1369  ABC transporter membrane protein  44.27 
 
 
272 aa  229  4e-59  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.0458182 
 
 
-
 
NC_013131  Caci_4306  binding-protein-dependent transport systems inner membrane component  45.05 
 
 
278 aa  224  1e-57  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.0649738  hitchhiker  0.00238236 
 
 
-
 
NC_013595  Sros_8275  ABC-type transporter, permease protein  47.03 
 
 
272 aa  221  8e-57  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.144641 
 
 
-
 
NC_014211  Ndas_4937  binding-protein-dependent transport systems inner membrane component  43.46 
 
 
287 aa  211  1e-53  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.0773955  normal 
 
 
-
 
NC_013159  Svir_18130  ABC-type nitrate/sulfonate/bicarbonate transport system, permease component  45.76 
 
 
283 aa  204  2e-51  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_008541  Arth_3035  binding-protein-dependent transport systems inner membrane component  44.81 
 
 
298 aa  201  9.999999999999999e-51  Arthrobacter sp. FB24  Bacteria  normal  0.30367  n/a   
 
 
-
 
NC_007333  Tfu_1692  putative ABC transporter membrane protein  45.06 
 
 
281 aa  197  1.0000000000000001e-49  Thermobifida fusca YX  Bacteria  hitchhiker  0.00465779  n/a   
 
 
-
 
NC_009712  Mboo_2012  binding-protein-dependent transport systems inner membrane component  43.04 
 
 
280 aa  196  5.000000000000001e-49  Candidatus Methanoregula boonei 6A8  Archaea  normal  0.338733  normal  0.193625 
 
 
-
 
NC_012560  Avin_44530  Binding-protein-dependent transport systems inner membrane component  47.88 
 
 
259 aa  187  2e-46  Azotobacter vinelandii DJ  Bacteria  normal  0.0634098  n/a   
 
 
-
 
NC_012791  Vapar_1899  binding-protein-dependent transport systems inner membrane component  46.92 
 
 
275 aa  185  1.0000000000000001e-45  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_009620  Smed_4214  binding-protein-dependent transport systems inner membrane component  37.63 
 
 
281 aa  167  2e-40  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_014150  Bmur_0403  binding-protein-dependent transport systems inner membrane component  40.3 
 
 
256 aa  163  4.0000000000000004e-39  Brachyspira murdochii DSM 12563  Bacteria  normal  n/a   
 
 
-
 
NC_008688  Pden_5126  binding-protein-dependent transport systems inner membrane component  41.04 
 
 
280 aa  159  6e-38  Paracoccus denitrificans PD1222  Bacteria  normal  normal 
 
 
-
 
NC_011368  Rleg2_4541  binding-protein-dependent transport systems inner membrane component  36.84 
 
 
283 aa  157  2e-37  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.193679 
 
 
-
 
NC_007348  Reut_B5801  binding-protein dependent transport system inner membrane protein  36.82 
 
 
290 aa  156  5.0000000000000005e-37  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_012854  Rleg_6387  binding-protein-dependent transport systems inner membrane component  37.35 
 
 
283 aa  152  4e-36  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.199649  normal  0.0607956 
 
 
-
 
NC_009636  Smed_1127  binding-protein-dependent transport systems inner membrane component  38.89 
 
 
267 aa  152  8.999999999999999e-36  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_008639  Cpha266_0145  binding-protein-dependent transport systems inner membrane component  37.12 
 
 
266 aa  150  2e-35  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  n/a   
 
 
-
 
NC_004311  BRA1188  taurine ABC transporter, permease protein  39.11 
 
 
250 aa  149  4e-35  Brucella suis 1330  Bacteria  normal  0.0612406  n/a   
 
 
-
 
NC_007974  Rmet_4332  ABC transporter permease  33.9 
 
 
298 aa  147  3e-34  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_011658  BCAH187_A3058  taurine ABC transporter, permease protein  38.92 
 
 
274 aa  143  3e-33  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK2748  sulfonate/taurine ABC transporter permease  38.92 
 
 
274 aa  141  9.999999999999999e-33  Bacillus cereus E33L  Bacteria  normal  0.947189  n/a   
 
 
-
 
NC_013595  Sros_3065  binding-protein-dependent transport systems inner membrane component  36.68 
 
 
280 aa  141  9.999999999999999e-33  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.228654 
 
 
-
 
NC_009253  Dred_1575  binding-protein-dependent transport systems inner membrane component  33.61 
 
 
254 aa  141  9.999999999999999e-33  Desulfotomaculum reducens MI-1  Bacteria  normal  0.0747147  n/a   
 
 
-
 
NC_003909  BCE_3060  taurine ABC transporter, permease protein  36.59 
 
 
274 aa  140  3e-32  Bacillus cereus ATCC 10987  Bacteria  normal  0.0244271  n/a   
 
 
-
 
NC_009485  BBta_6360  putative sulfonate ABC transporter, permease protein  32.64 
 
 
267 aa  140  3e-32  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.821284  normal 
 
 
-
 
NC_009634  Mevan_0512  binding-protein-dependent transport systems inner membrane component  39.71 
 
 
253 aa  139  4.999999999999999e-32  Methanococcus vannielii SB  Archaea  normal  n/a   
 
 
-
 
NC_011004  Rpal_4641  binding-protein-dependent transport systems inner membrane component  32.07 
 
 
277 aa  138  1e-31  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.750363  n/a   
 
 
-
 
NC_007644  Moth_1974  binding-protein dependent transport system inner membrane protein  35.24 
 
 
261 aa  136  4e-31  Moorella thermoacetica ATCC 39073  Bacteria  hitchhiker  0.000000226251  normal 
 
 
-
 
NC_007492  Pfl01_0254  binding-protein dependent transport system inner membrane protein  32.52 
 
 
279 aa  134  1.9999999999999998e-30  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.57663 
 
 
-
 
NC_010510  Mrad2831_6154  binding-protein-dependent transport systems inner membrane component  35.68 
 
 
295 aa  134  1.9999999999999998e-30  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_009720  Xaut_2085  binding-protein-dependent transport systems inner membrane component  34.17 
 
 
319 aa  133  3e-30  Xanthobacter autotrophicus Py2  Bacteria  normal  normal  0.0787698 
 
 
-
 
NC_009485  BBta_2566  ABC transporter, membrane subunit  33.2 
 
 
252 aa  133  3e-30  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.345232 
 
 
-
 
NC_009436  Ent638_1453  alkanesulfonate transporter permease subunit  34.35 
 
 
263 aa  131  1.0000000000000001e-29  Enterobacter sp. 638  Bacteria  normal  normal 
 
 
-
 
NC_012912  Dd1591_1673  binding-protein-dependent transport systems inner membrane component  33.48 
 
 
263 aa  131  1.0000000000000001e-29  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_5607  binding-protein-dependent transport systems inner membrane component  30.2 
 
 
268 aa  131  1.0000000000000001e-29  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.230241  normal  0.644528 
 
 
-
 
NC_011757  Mchl_1422  binding-protein-dependent transport systems inner membrane component  31.54 
 
 
273 aa  130  2.0000000000000002e-29  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_010172  Mext_1261  binding-protein-dependent transport systems inner membrane component  31.54 
 
 
273 aa  130  2.0000000000000002e-29  Methylobacterium extorquens PA1  Bacteria  normal  normal  0.306936 
 
 
-
 
NC_009635  Maeo_0992  binding-protein-dependent transport systems inner membrane component  33.88 
 
 
254 aa  130  3e-29  Methanococcus aeolicus Nankai-3  Archaea  normal  n/a   
 
 
-
 
NC_009832  Spro_1736  binding-protein-dependent transport systems inner membrane component  34.8 
 
 
264 aa  130  3e-29  Serratia proteamaculans 568  Bacteria  normal  0.440066  normal  0.144233 
 
 
-
 
NC_012792  Vapar_5517  binding-protein-dependent transport systems inner membrane component  33.94 
 
 
256 aa  129  5.0000000000000004e-29  Variovorax paradoxus S110  Bacteria  normal  0.16627  n/a   
 
 
-
 
NC_007925  RPC_0846  binding-protein-dependent transport systems inner membrane component  34.05 
 
 
255 aa  129  5.0000000000000004e-29  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.185051 
 
 
-
 
NC_011757  Mchl_4201  binding-protein-dependent transport systems inner membrane component  33.06 
 
 
305 aa  129  5.0000000000000004e-29  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_009675  Anae109_3869  binding-protein-dependent transport systems inner membrane component  34.17 
 
 
274 aa  129  6e-29  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal 
 
 
-
 
NC_013517  Sterm_0483  binding-protein-dependent transport systems inner membrane component  30.71 
 
 
275 aa  129  6e-29  Sebaldella termitidis ATCC 33386  Bacteria  normal  n/a   
 
 
-
 
NC_010725  Mpop_1211  binding-protein-dependent transport systems inner membrane component  32.4 
 
 
273 aa  129  7.000000000000001e-29  Methylobacterium populi BJ001  Bacteria  normal  0.132759  normal  0.452833 
 
 
-
 
NC_009720  Xaut_4051  binding-protein-dependent transport systems inner membrane component  31.82 
 
 
273 aa  129  8.000000000000001e-29  Xanthobacter autotrophicus Py2  Bacteria  normal  normal  0.395379 
 
 
-
 
NC_009012  Cthe_2803  binding-protein-dependent transport systems inner membrane component  34.08 
 
 
259 aa  129  8.000000000000001e-29  Clostridium thermocellum ATCC 27405  Bacteria  hitchhiker  0.00122675  n/a   
 
 
-
 
NC_009485  BBta_3299  putative sulfonate ABC transporter, permease protein  34.2 
 
 
286 aa  128  9.000000000000001e-29  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.201269  normal  0.262094 
 
 
-
 
NC_012880  Dd703_1642  binding-protein-dependent transport systems inner membrane component  33.05 
 
 
263 aa  128  1.0000000000000001e-28  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_1734  binding-protein-dependent transport systems inner membrane component  35.65 
 
 
252 aa  128  1.0000000000000001e-28  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_014150  Bmur_2553  binding-protein-dependent transport systems inner membrane component  33.68 
 
 
275 aa  128  1.0000000000000001e-28  Brachyspira murdochii DSM 12563  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_19570  ABC transporter permease  35.24 
 
 
262 aa  128  1.0000000000000001e-28  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_005945  BAS2712  sulfonate ABC transporter permease  30.57 
 
 
282 aa  127  2.0000000000000002e-28  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_010501  PputW619_4981  binding-protein-dependent transport systems inner membrane component  33.05 
 
 
279 aa  127  2.0000000000000002e-28  Pseudomonas putida W619  Bacteria  normal  normal  0.588836 
 
 
-
 
NC_007517  Gmet_1900  binding-protein dependent transport system inner membrane protein  38.26 
 
 
252 aa  127  2.0000000000000002e-28  Geobacter metallireducens GS-15  Bacteria  normal  0.128113  hitchhiker  0.000000000000910228 
 
 
-
 
NC_007530  GBAA_2920  sulfonate ABC transporter permease protein  30.57 
 
 
282 aa  127  2.0000000000000002e-28  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_009656  PSPA7_1684  ABC transporter permease  35.24 
 
 
262 aa  127  2.0000000000000002e-28  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_008786  Veis_1108  binding-protein-dependent transport systems inner membrane component  34.07 
 
 
255 aa  127  2.0000000000000002e-28  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal  0.135552 
 
 
-
 
NC_009674  Bcer98_1998  binding-protein-dependent transport systems inner membrane component  29.74 
 
 
283 aa  126  4.0000000000000003e-28  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  0.894639  n/a   
 
 
-
 
NC_009135  MmarC5_0393  binding-protein-dependent transport systems inner membrane component  35.9 
 
 
253 aa  126  5e-28  Methanococcus maripaludis C5  Archaea  normal  0.0876322  n/a   
 
 
-
 
NC_010501  PputW619_4973  binding-protein-dependent transport systems inner membrane component  33.48 
 
 
265 aa  125  6e-28  Pseudomonas putida W619  Bacteria  normal  0.0722896  normal  0.022026 
 
 
-
 
NC_012917  PC1_0024  binding-protein-dependent transport systems inner membrane component  34.42 
 
 
264 aa  125  6e-28  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_010725  Mpop_4185  binding-protein-dependent transport systems inner membrane component  35.86 
 
 
283 aa  125  7e-28  Methylobacterium populi BJ001  Bacteria  normal  0.321257  normal 
 
 
-
 
NC_014150  Bmur_0154  binding-protein-dependent transport systems inner membrane component  34.34 
 
 
264 aa  125  7e-28  Brachyspira murdochii DSM 12563  Bacteria  normal  n/a   
 
 
-
 
NC_012793  GWCH70_2621  binding-protein-dependent transport systems inner membrane component  29.18 
 
 
281 aa  125  7e-28  Geobacillus sp. WCH70  Bacteria  hitchhiker  0.00000218671  n/a   
 
 
-
 
NC_007492  Pfl01_5412  binding-protein dependent transport system inner membrane protein  33.92 
 
 
260 aa  125  8.000000000000001e-28  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.210037  hitchhiker  0.00191971 
 
 
-
 
NC_013421  Pecwa_1800  binding-protein-dependent transport systems inner membrane component  31.37 
 
 
257 aa  125  8.000000000000001e-28  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_009512  Pput_0246  binding-protein-dependent transport systems inner membrane component  34.2 
 
 
279 aa  125  8.000000000000001e-28  Pseudomonas putida F1  Bacteria  normal  0.0570948  normal  0.0921514 
 
 
-
 
NC_014150  Bmur_1575  binding-protein-dependent transport systems inner membrane component  34.82 
 
 
266 aa  125  8.000000000000001e-28  Brachyspira murdochii DSM 12563  Bacteria  normal  n/a   
 
 
-
 
NC_007948  Bpro_2935  binding-protein-dependent transport systems inner membrane component  33.19 
 
 
252 aa  125  9e-28  Polaromonas sp. JS666  Bacteria  normal  normal 
 
 
-
 
NC_002947  PP_0231  binding-protein-dependent transport systems inner membrane component  33.05 
 
 
279 aa  125  1e-27  Pseudomonas putida KT2440  Bacteria  normal  0.33405  hitchhiker  0.000710194 
 
 
-
 
NC_009512  Pput_0254  binding-protein-dependent transport systems inner membrane component  33.04 
 
 
265 aa  125  1e-27  Pseudomonas putida F1  Bacteria  normal  0.293544  normal  0.0445843 
 
 
-
 
NC_009975  MmarC6_1476  binding-protein-dependent transport systems inner membrane component  35.71 
 
 
253 aa  125  1e-27  Methanococcus maripaludis C6  Archaea  normal  n/a   
 
 
-
 
NC_012917  PC1_1402  binding-protein-dependent transport systems inner membrane component  30.98 
 
 
257 aa  124  1e-27  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_012560  Avin_21600  aliphatic sulfonates ABC transporter, inner membrane component  32.33 
 
 
284 aa  125  1e-27  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_011830  Dhaf_3643  binding-protein-dependent transport systems inner membrane component  30.68 
 
 
252 aa  124  1e-27  Desulfitobacterium hafniense DCB-2  Bacteria  hitchhiker  0.000000000799696  n/a   
 
 
-
 
NC_002947  PP_0239  binding-protein-dependent transport systems inner membrane component  33.18 
 
 
265 aa  124  2e-27  Pseudomonas putida KT2440  Bacteria  normal  hitchhiker  0.00756787 
 
 
-
 
NC_004578  PSPTO_5321  taurine ABC transporter, permease protein  32.17 
 
 
285 aa  124  2e-27  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_013421  Pecwa_0030  binding-protein-dependent transport systems inner membrane component  34.42 
 
 
264 aa  124  2e-27  Pectobacterium wasabiae WPP163  Bacteria  normal  0.050552  n/a   
 
 
-
 
NC_007952  Bxe_B2638  ABC sulfonate transporter, inner membrane subunit  29.97 
 
 
279 aa  124  2e-27  Burkholderia xenovorans LB400  Bacteria  normal  0.0950643  hitchhiker  0.0000361652 
 
 
-
 
NC_007953  Bxe_C0981  nitrate/sulfonate/bicarbonate ABC transporter inner membrane protein  33.05 
 
 
279 aa  124  2e-27  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_010322  PputGB1_0263  binding-protein-dependent transport systems inner membrane component  33.04 
 
 
265 aa  124  2e-27  Pseudomonas putida GB-1  Bacteria  normal  0.791848  normal 
 
 
-
 
NC_009637  MmarC7_0444  binding-protein-dependent transport systems inner membrane component  35.71 
 
 
253 aa  124  3e-27  Methanococcus maripaludis C7  Archaea  normal  normal 
 
 
-
 
NC_011757  Mchl_3671  binding-protein-dependent transport systems inner membrane component  36.41 
 
 
287 aa  122  5e-27  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.0347715  normal 
 
 
-
 
NC_010172  Mext_3346  binding-protein-dependent transport systems inner membrane component  36.41 
 
 
291 aa  122  5e-27  Methylobacterium extorquens PA1  Bacteria  normal  0.252204  normal 
 
 
-
 
NC_011004  Rpal_2882  binding-protein-dependent transport systems inner membrane component  31.03 
 
 
268 aa  122  6e-27  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.80309  n/a   
 
 
-
 
NC_007778  RPB_1488  binding-protein dependent transport system inner membrane protein  30.98 
 
 
280 aa  122  6e-27  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.106569  normal  0.790334 
 
 
-
 
NC_009632  SaurJH1_0164  binding-protein-dependent transport systems inner membrane component  32.02 
 
 
253 aa  122  7e-27  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  n/a   
 
 
-
 
NC_009487  SaurJH9_0159  binding-protein-dependent transport systems inner membrane component  32.02 
 
 
253 aa  122  7e-27  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  n/a   
 
 
-
 
NC_007778  RPB_4060  binding-protein dependent transport system inner membrane protein  30.34 
 
 
256 aa  122  8e-27  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_012917  PC1_3747  binding-protein-dependent transport systems inner membrane component  32.28 
 
 
254 aa  122  9e-27  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_008146  Mmcs_2583  binding-protein-dependent transport systems inner membrane component  35.03 
 
 
289 aa  121  9.999999999999999e-27  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_2628  binding-protein-dependent transport systems inner membrane component  35.03 
 
 
289 aa  121  9.999999999999999e-27  Mycobacterium sp. KMS  Bacteria  normal  0.128032  normal 
 
 
-
 
NC_009077  Mjls_2622  binding-protein-dependent transport systems inner membrane component  35.03 
 
 
289 aa  121  9.999999999999999e-27  Mycobacterium sp. JLS  Bacteria  normal  0.753313  normal 
 
 
-
 
NC_010498  EcSMS35_2185  alkanesulfonate transporter permease subunit  34.04 
 
 
264 aa  122  9.999999999999999e-27  Escherichia coli SMS-3-5  Bacteria  normal  0.11182  normal  0.890131 
 
 
-
 
CP001637  EcDH1_2709  binding-protein-dependent transport systems inner membrane component  34.04 
 
 
263 aa  121  1.9999999999999998e-26  Escherichia coli DH1  Bacteria  normal  0.753275  n/a   
 
 
-
 
NC_002947  PP_0208  nitrate ABC transporter, permease protein, putative  33.02 
 
 
260 aa  120  1.9999999999999998e-26  Pseudomonas putida KT2440  Bacteria  normal  normal  0.473726 
 
 
-
 
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