More than 300 homologs were found in PanDaTox collection
for query gene Franean1_0052 on replicon NC_009921
Organism: Frankia sp. EAN1pec



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009921  Franean1_0052  short-chain dehydrogenase/reductase SDR  100 
 
 
259 aa  519  1e-146  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_4554  short-chain dehydrogenase/reductase SDR  66.41 
 
 
218 aa  325  4.0000000000000003e-88  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_013501  Rmar_2036  short-chain dehydrogenase/reductase SDR  47.66 
 
 
258 aa  224  1e-57  Rhodothermus marinus DSM 4252  Bacteria  normal  n/a   
 
 
-
 
NC_013440  Hoch_5001  short-chain dehydrogenase/reductase SDR  45.28 
 
 
256 aa  210  2e-53  Haliangium ochraceum DSM 14365  Bacteria  normal  normal  0.46394 
 
 
-
 
NC_007760  Adeh_2760  short-chain dehydrogenase/reductase SDR  47.64 
 
 
256 aa  206  2e-52  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  hitchhiker  0.0058487  n/a   
 
 
-
 
NC_009675  Anae109_2033  short-chain dehydrogenase/reductase SDR  46.85 
 
 
256 aa  206  2e-52  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  hitchhiker  0.00849421 
 
 
-
 
NC_011145  AnaeK_2852  short-chain dehydrogenase/reductase SDR  47.24 
 
 
256 aa  206  3e-52  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_011891  A2cp1_2944  short-chain dehydrogenase/reductase SDR  47.24 
 
 
256 aa  206  4e-52  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_007777  Francci3_1239  short-chain dehydrogenase/reductase SDR  40.78 
 
 
259 aa  172  5.999999999999999e-42  Frankia sp. CcI3  Bacteria  normal  normal  0.198291 
 
 
-
 
NC_009719  Plav_0501  short-chain dehydrogenase/reductase SDR  38.13 
 
 
256 aa  168  7e-41  Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal  0.472606 
 
 
-
 
NC_014210  Ndas_2776  short-chain dehydrogenase/reductase SDR  42.69 
 
 
253 aa  161  8.000000000000001e-39  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.627467 
 
 
-
 
NC_010338  Caul_2720  short-chain dehydrogenase/reductase SDR  41.86 
 
 
256 aa  161  1e-38  Caulobacter sp. K31  Bacteria  normal  normal 
 
 
-
 
NC_012793  GWCH70_0923  short-chain dehydrogenase/reductase SDR  36.72 
 
 
261 aa  159  3e-38  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_5862  putative 3-ketoacyl-CoA reductase  41.43 
 
 
251 aa  159  6e-38  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_013205  Aaci_0216  short-chain dehydrogenase/reductase SDR  37.25 
 
 
260 aa  157  1e-37  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_008146  Mmcs_2657  short-chain dehydrogenase/reductase SDR  38.58 
 
 
253 aa  156  3e-37  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_2702  short-chain dehydrogenase/reductase SDR  38.58 
 
 
253 aa  156  3e-37  Mycobacterium sp. KMS  Bacteria  normal  normal  0.0205678 
 
 
-
 
NC_009077  Mjls_2687  short-chain dehydrogenase/reductase SDR  38.58 
 
 
253 aa  156  3e-37  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_013525  Tter_0758  short-chain dehydrogenase/reductase SDR  35.69 
 
 
262 aa  155  6e-37  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_009921  Franean1_1992  short-chain dehydrogenase/reductase SDR  39.15 
 
 
362 aa  154  2e-36  Frankia sp. EAN1pec  Bacteria  decreased coverage  0.00359465  normal  0.191358 
 
 
-
 
NC_009484  Acry_1734  short-chain dehydrogenase/reductase SDR  38.8 
 
 
247 aa  153  2.9999999999999998e-36  Acidiphilium cryptum JF-5  Bacteria  normal  0.798961  n/a   
 
 
-
 
NC_012560  Avin_12220  Short-chain dehydrogenase/reductase SDR  38 
 
 
250 aa  152  5.9999999999999996e-36  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_007958  RPD_4287  short-chain dehydrogenase/reductase SDR  36.92 
 
 
253 aa  150  1e-35  Rhodopseudomonas palustris BisB5  Bacteria  normal  hitchhiker  0.00908488 
 
 
-
 
NC_010501  PputW619_2609  short-chain dehydrogenase/reductase SDR  35.83 
 
 
250 aa  149  6e-35  Pseudomonas putida W619  Bacteria  normal  normal  0.328906 
 
 
-
 
NC_013131  Caci_3622  short-chain dehydrogenase/reductase SDR  39.31 
 
 
262 aa  149  6e-35  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.154401  normal 
 
 
-
 
NC_013501  Rmar_2450  3-oxoacyl-(acyl-carrier-protein) reductase  38.06 
 
 
249 aa  148  9e-35  Rhodothermus marinus DSM 4252  Bacteria  normal  n/a   
 
 
-
 
NC_007925  RPC_3013  short-chain dehydrogenase/reductase SDR  35.69 
 
 
253 aa  147  2.0000000000000003e-34  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.47277 
 
 
-
 
NC_011369  Rleg2_3481  3-ketoacyl-(acyl-carrier-protein) reductase  37.07 
 
 
259 aa  146  3e-34  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.187301  normal  0.768221 
 
 
-
 
NC_009484  Acry_1422  short-chain dehydrogenase/reductase SDR  36.86 
 
 
253 aa  146  3e-34  Acidiphilium cryptum JF-5  Bacteria  normal  0.182902  n/a   
 
 
-
 
NC_009338  Mflv_5148  short-chain dehydrogenase/reductase SDR  39.37 
 
 
253 aa  146  4.0000000000000006e-34  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.398999  normal  0.903635 
 
 
-
 
NC_009511  Swit_2272  short-chain dehydrogenase/reductase SDR  35.94 
 
 
253 aa  146  4.0000000000000006e-34  Sphingomonas wittichii RW1  Bacteria  normal  0.851754  normal  0.710684 
 
 
-
 
NC_009921  Franean1_4547  hypothetical protein  79.07 
 
 
130 aa  145  5e-34  Frankia sp. EAN1pec  Bacteria  normal  0.688314  normal 
 
 
-
 
NC_011004  Rpal_2670  short-chain dehydrogenase/reductase SDR  35.04 
 
 
253 aa  145  8.000000000000001e-34  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.243755  n/a   
 
 
-
 
NC_011989  Avi_0538  3-ketoacyl-(acyl-carrier-protein) reductase  36.96 
 
 
265 aa  144  9e-34  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_4239  short chain dehydrogenase  39.47 
 
 
268 aa  144  1e-33  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.0369625 
 
 
-
 
NC_009077  Mjls_1473  short-chain dehydrogenase/reductase SDR  38.34 
 
 
249 aa  144  1e-33  Mycobacterium sp. JLS  Bacteria  normal  0.162054  normal 
 
 
-
 
NC_013595  Sros_3004  short chain dehydrogenase  37.97 
 
 
268 aa  144  2e-33  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_012850  Rleg_3769  3-ketoacyl-(acyl-carrier-protein) reductase  35.91 
 
 
259 aa  143  2e-33  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.988142 
 
 
-
 
NC_008463  PA14_10840  putative dehydrogenase  36.22 
 
 
250 aa  144  2e-33  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  decreased coverage  0.000000000000391035  normal 
 
 
-
 
NC_013385  Adeg_0958  3-oxoacyl-(acyl-carrier-protein) reductase  38.8 
 
 
247 aa  142  4e-33  Ammonifex degensii KC4  Bacteria  normal  n/a   
 
 
-
 
NC_011004  Rpal_1300  short-chain dehydrogenase/reductase SDR  36.54 
 
 
262 aa  142  5e-33  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_013411  GYMC61_1799  short-chain dehydrogenase/reductase SDR  36.72 
 
 
261 aa  142  6e-33  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_008148  Rxyl_1866  short-chain dehydrogenase/reductase SDR  39.23 
 
 
265 aa  140  1.9999999999999998e-32  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_1498  short-chain dehydrogenase/reductase SDR  37.69 
 
 
256 aa  140  1.9999999999999998e-32  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_008554  Sfum_0112  short-chain dehydrogenase/reductase SDR  33.59 
 
 
263 aa  139  3e-32  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_010505  Mrad2831_3316  short-chain dehydrogenase/reductase SDR  36.47 
 
 
253 aa  138  7e-32  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_013922  Nmag_1055  short-chain dehydrogenase/reductase SDR  35.69 
 
 
258 aa  138  8.999999999999999e-32  Natrialba magadii ATCC 43099  Archaea  normal  n/a   
 
 
-
 
NC_008786  Veis_3774  short chain dehydrogenase  37.6 
 
 
258 aa  137  1e-31  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.644601  normal  0.413475 
 
 
-
 
NC_007413  Ava_4328  Short-chain dehydrogenase/reductase SDR  32.82 
 
 
294 aa  137  2e-31  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_007778  RPB_4257  Short-chain dehydrogenase/reductase SDR  36.78 
 
 
262 aa  137  2e-31  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.0797349  normal 
 
 
-
 
NC_010581  Bind_2338  short-chain dehydrogenase/reductase SDR  35.91 
 
 
263 aa  137  2e-31  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  normal  0.288132 
 
 
-
 
NC_007413  Ava_0311  Short-chain dehydrogenase/reductase SDR  34.11 
 
 
262 aa  136  3.0000000000000003e-31  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_009720  Xaut_2759  short-chain dehydrogenase/reductase SDR  35.91 
 
 
261 aa  136  3.0000000000000003e-31  Xanthobacter autotrophicus Py2  Bacteria  normal  normal 
 
 
-
 
NC_013501  Rmar_2206  short-chain dehydrogenase/reductase SDR  37.3 
 
 
266 aa  136  3.0000000000000003e-31  Rhodothermus marinus DSM 4252  Bacteria  normal  0.416605  n/a   
 
 
-
 
NC_013743  Htur_2906  short-chain dehydrogenase/reductase SDR  34.51 
 
 
258 aa  135  5e-31  Haloterrigena turkmenica DSM 5511  Archaea  n/a    n/a   
 
 
-
 
NC_007333  Tfu_1841  putative 3-ketoacyl-CoA reductase  39.61 
 
 
250 aa  135  7.000000000000001e-31  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_007953  Bxe_C0610  putative short-chain dehydrogenase/reductase  36.12 
 
 
286 aa  135  7.000000000000001e-31  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.0678259 
 
 
-
 
NC_008726  Mvan_1185  short-chain dehydrogenase/reductase SDR  35.43 
 
 
242 aa  135  7.000000000000001e-31  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_010676  Bphyt_5751  short-chain dehydrogenase/reductase SDR  34.77 
 
 
254 aa  134  9.999999999999999e-31  Burkholderia phytofirmans PsJN  Bacteria  normal  0.0937136  normal 
 
 
-
 
NC_013158  Huta_1623  short-chain dehydrogenase/reductase SDR  37.26 
 
 
261 aa  134  9.999999999999999e-31  Halorhabdus utahensis DSM 12940  Archaea  normal  n/a   
 
 
-
 
NC_013757  Gobs_3777  short-chain dehydrogenase/reductase SDR  37.02 
 
 
262 aa  134  9.999999999999999e-31  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_013205  Aaci_1211  short-chain dehydrogenase/reductase SDR  35.48 
 
 
250 aa  133  1.9999999999999998e-30  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  0.663428  n/a   
 
 
-
 
NC_008699  Noca_3863  3-ketoacyl-(acyl-carrier-protein) reductase  40.49 
 
 
250 aa  134  1.9999999999999998e-30  Nocardioides sp. JS614  Bacteria  normal  0.385562  n/a   
 
 
-
 
NC_013757  Gobs_1965  short-chain dehydrogenase/reductase SDR  37.01 
 
 
253 aa  133  3e-30  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.164204  n/a   
 
 
-
 
NC_009077  Mjls_2812  short-chain dehydrogenase/reductase SDR  35.55 
 
 
255 aa  133  3e-30  Mycobacterium sp. JLS  Bacteria  normal  0.199732  normal 
 
 
-
 
NC_011661  Dtur_0422  sorbitol-6-phosphate dehydrogenase  33.33 
 
 
265 aa  132  3.9999999999999996e-30  Dictyoglomus turgidum DSM 6724  Bacteria  decreased coverage  0.0026318  n/a   
 
 
-
 
NC_010511  M446_1803  short-chain dehydrogenase/reductase SDR  36.63 
 
 
262 aa  132  3.9999999999999996e-30  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.225984 
 
 
-
 
NC_007778  RPB_1751  Short-chain dehydrogenase/reductase SDR  35.46 
 
 
257 aa  132  3.9999999999999996e-30  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.0168825 
 
 
-
 
NC_009972  Haur_2614  short-chain dehydrogenase/reductase SDR  34.94 
 
 
257 aa  132  3.9999999999999996e-30  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.042976  n/a   
 
 
-
 
NC_013501  Rmar_0816  short-chain dehydrogenase/reductase SDR  35.79 
 
 
271 aa  132  5e-30  Rhodothermus marinus DSM 4252  Bacteria  normal  n/a   
 
 
-
 
NC_007948  Bpro_0097  short-chain dehydrogenase/reductase SDR  37.14 
 
 
262 aa  132  5e-30  Polaromonas sp. JS666  Bacteria  normal  normal 
 
 
-
 
NC_008146  Mmcs_2785  short-chain dehydrogenase/reductase SDR  35.55 
 
 
255 aa  132  6e-30  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_2829  short-chain dehydrogenase/reductase SDR  35.55 
 
 
255 aa  132  6e-30  Mycobacterium sp. KMS  Bacteria  normal  0.150517  normal  0.215397 
 
 
-
 
NC_014212  Mesil_2788  short-chain dehydrogenase/reductase SDR  38.46 
 
 
254 aa  131  1.0000000000000001e-29  Meiothermus silvanus DSM 9946  Bacteria  normal  normal  0.743418 
 
 
-
 
NC_013411  GYMC61_2515  short-chain dehydrogenase/reductase SDR  34.51 
 
 
250 aa  131  1.0000000000000001e-29  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_010338  Caul_1925  short-chain dehydrogenase/reductase SDR  34.24 
 
 
288 aa  131  1.0000000000000001e-29  Caulobacter sp. K31  Bacteria  normal  normal 
 
 
-
 
NC_008701  Pisl_1089  short-chain dehydrogenase/reductase SDR  33.46 
 
 
260 aa  131  1.0000000000000001e-29  Pyrobaculum islandicum DSM 4184  Archaea  normal  normal 
 
 
-
 
NC_008697  Noca_4841  short-chain dehydrogenase/reductase SDR  35.22 
 
 
258 aa  130  2.0000000000000002e-29  Nocardioides sp. JS614  Bacteria  normal  0.166683  normal 
 
 
-
 
NC_011004  Rpal_4233  short-chain dehydrogenase/reductase SDR  35.06 
 
 
257 aa  130  2.0000000000000002e-29  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_1531  short-chain dehydrogenase/reductase SDR  37.59 
 
 
268 aa  130  2.0000000000000002e-29  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.50523  normal 
 
 
-
 
NC_013947  Snas_4708  short-chain dehydrogenase/reductase SDR  34.87 
 
 
279 aa  130  3e-29  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.270996  normal 
 
 
-
 
NC_010525  Tneu_0044  short-chain dehydrogenase/reductase SDR  34.25 
 
 
259 aa  130  3e-29  Thermoproteus neutrophilus V24Sta  Archaea  normal  normal  0.0333473 
 
 
-
 
NC_012856  Rpic12D_2582  short chain dehydrogenase  35.69 
 
 
269 aa  129  4.0000000000000003e-29  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_007958  RPD_4158  short-chain dehydrogenase/reductase SDR  34.87 
 
 
262 aa  129  5.0000000000000004e-29  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.526951  normal 
 
 
-
 
NC_012034  Athe_0698  sorbitol-6-phosphate dehydrogenase  31.64 
 
 
259 aa  129  5.0000000000000004e-29  Anaerocellum thermophilum DSM 6725  Bacteria  hitchhiker  0.00117968  n/a   
 
 
-
 
NC_009376  Pars_0834  3-ketoacyl-(acyl-carrier-protein) reductase  35.34 
 
 
299 aa  129  6e-29  Pyrobaculum arsenaticum DSM 13514  Archaea  normal  normal  0.391136 
 
 
-
 
NC_009832  Spro_3866  short-chain dehydrogenase/reductase SDR  34.14 
 
 
249 aa  129  6e-29  Serratia proteamaculans 568  Bacteria  normal  0.508042  normal 
 
 
-
 
NC_013132  Cpin_4605  short-chain dehydrogenase/reductase SDR  34.52 
 
 
255 aa  128  7.000000000000001e-29  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.350123  normal 
 
 
-
 
NC_008009  Acid345_0643  short-chain dehydrogenase/reductase SDR  33.73 
 
 
271 aa  128  8.000000000000001e-29  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal  0.224446 
 
 
-
 
NC_013205  Aaci_0156  short-chain dehydrogenase/reductase SDR  33.07 
 
 
253 aa  128  8.000000000000001e-29  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  hitchhiker  0.000000282185  n/a   
 
 
-
 
NC_013922  Nmag_1285  short-chain dehydrogenase/reductase SDR  33.33 
 
 
266 aa  128  9.000000000000001e-29  Natrialba magadii ATCC 43099  Archaea  normal  n/a   
 
 
-
 
NC_009767  Rcas_0104  short-chain dehydrogenase/reductase SDR  35.48 
 
 
246 aa  128  1.0000000000000001e-28  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.650868  normal 
 
 
-
 
NC_009972  Haur_3329  3-ketoacyl-(acyl-carrier-protein) reductase  32.7 
 
 
260 aa  127  1.0000000000000001e-28  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_007498  Pcar_1438  3-oxoacyl-(acyl-carrier-protein) reductase  34.41 
 
 
245 aa  128  1.0000000000000001e-28  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_010524  Lcho_2375  short-chain dehydrogenase/reductase SDR  36.36 
 
 
265 aa  128  1.0000000000000001e-28  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_010085  Nmar_0026  short-chain dehydrogenase/reductase SDR  33.6 
 
 
269 aa  127  1.0000000000000001e-28  Nitrosopumilus maritimus SCM1  Archaea  n/a    normal 
 
 
-
 
NC_013202  Hmuk_1023  short-chain dehydrogenase/reductase SDR  34.59 
 
 
260 aa  127  2.0000000000000002e-28  Halomicrobium mukohataei DSM 12286  Archaea  normal  normal  0.24583 
 
 
-
 
NC_009427  Saro_3486  short-chain dehydrogenase/reductase SDR  33.86 
 
 
253 aa  127  2.0000000000000002e-28  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  n/a   
 
 
-
 
NC_010682  Rpic_2992  short chain dehydrogenase  35.16 
 
 
269 aa  127  2.0000000000000002e-28  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_013526  Tter_2517  short-chain dehydrogenase/reductase SDR  36.65 
 
 
257 aa  127  2.0000000000000002e-28  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  0.401645  n/a   
 
 
-
 
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