More than 300 homologs were found in PanDaTox collection
for query gene Strop_2230 on replicon NC_009380
Organism: Salinispora tropica CNB-440



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009380  Strop_2230  glucose-1-phosphate thymidylyltransferase  100 
 
 
290 aa  587  1e-167  Salinispora tropica CNB-440  Bacteria  normal  0.615659  normal 
 
 
-
 
NC_013510  Tcur_2763  glucose-1-phosphate thymidylyltransferase  71.63 
 
 
300 aa  437  9.999999999999999e-123  Thermomonospora curvata DSM 43183  Bacteria  normal  0.010329  n/a   
 
 
-
 
NC_009953  Sare_2335  glucose-1-phosphate thymidylyltransferase  71.03 
 
 
307 aa  426  1e-118  Salinispora arenicola CNS-205  Bacteria  normal  normal  0.243672 
 
 
-
 
NC_013093  Amir_6654  glucose-1-phosphate thymidylyltransferase  67.82 
 
 
292 aa  422  1e-117  Actinosynnema mirum DSM 43827  Bacteria  normal  0.147178  n/a   
 
 
-
 
NC_013159  Svir_03410  Glucose-1-phosphate thymidylyltransferase  69.66 
 
 
293 aa  416  9.999999999999999e-116  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.0401967  normal 
 
 
-
 
NC_013235  Namu_4180  glucose-1-phosphate thymidylyltransferase  67.59 
 
 
293 aa  416  9.999999999999999e-116  Nakamurella multipartita DSM 44233  Bacteria  normal  0.112992  normal 
 
 
-
 
NC_009439  Pmen_4290  glucose-1-phosphate thymidylyltransferase  61.94 
 
 
290 aa  380  1e-104  Pseudomonas mendocina ymp  Bacteria  normal  normal  0.314543 
 
 
-
 
NC_011989  Avi_1983  glucose-1-phosphate thymidylyltransferase  63.38 
 
 
287 aa  375  1e-103  Agrobacterium vitis S4  Bacteria  normal  0.967411  n/a   
 
 
-
 
NC_013037  Dfer_2896  glucose-1-phosphate thymidylyltransferase  62.98 
 
 
288 aa  375  1e-103  Dyadobacter fermentans DSM 18053  Bacteria  normal  normal  0.257197 
 
 
-
 
NC_007492  Pfl01_4056  glucose-1-phosphate thymidylyltransferase  61.92 
 
 
296 aa  371  1e-102  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.340468 
 
 
-
 
NC_011989  Avi_1494  glucose-1-phosphate thymidylyltransferase  63.03 
 
 
287 aa  372  1e-102  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_013730  Slin_5841  glucose-1-phosphate thymidylyltransferase  62.81 
 
 
286 aa  370  1e-101  Spirosoma linguale DSM 74  Bacteria  normal  normal  0.572504 
 
 
-
 
NC_009512  Pput_3933  glucose-1-phosphate thymidylyltransferase  61.21 
 
 
296 aa  369  1e-101  Pseudomonas putida F1  Bacteria  normal  0.527502  normal  0.192647 
 
 
-
 
NC_004578  PSPTO_1079  glucose-1-phosphate thymidylyltransferase  59.79 
 
 
296 aa  364  1e-100  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.857116  n/a   
 
 
-
 
NC_009708  YpsIP31758_0187  glucose-1-phosphate thymidylyltransferase  60.7 
 
 
293 aa  367  1e-100  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_011662  Tmz1t_3810  glucose-1-phosphate thymidylyltransferase  59.66 
 
 
292 aa  365  1e-100  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_010465  YPK_4028  glucose-1-phosphate thymidylyltransferase  60.7 
 
 
310 aa  366  1e-100  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_010159  YpAngola_A0517  glucose-1-phosphate thymidylyltransferase  60.7 
 
 
293 aa  367  1e-100  Yersinia pestis Angola  Bacteria  normal  normal 
 
 
-
 
NC_007969  Pcryo_0625  glucose-1-phosphate thymidylyltransferase  60.35 
 
 
290 aa  367  1e-100  Psychrobacter cryohalolentis K5  Bacteria  normal  normal  0.150141 
 
 
-
 
NC_009943  Dole_1011  glucose-1-phosphate thymidylyltransferase  63.51 
 
 
292 aa  367  1e-100  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_013512  Sdel_1786  glucose-1-phosphate thymidylyltransferase  59.72 
 
 
292 aa  365  1e-100  Sulfurospirillum deleyianum DSM 6946  Bacteria  normal  n/a   
 
 
-
 
NC_009832  Spro_0166  glucose-1-phosphate thymidylyltransferase  60.35 
 
 
293 aa  365  1e-100  Serratia proteamaculans 568  Bacteria  normal  0.455037  normal 
 
 
-
 
NC_007964  Nham_1059  glucose-1-phosphate thymidylyltransferase  61.54 
 
 
291 aa  363  2e-99  Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_008228  Patl_2131  glucose-1-phosphate thymidylyltransferase  60 
 
 
297 aa  363  3e-99  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_013061  Phep_4022  glucose-1-phosphate thymidylyltransferase  61.4 
 
 
286 aa  362  4e-99  Pedobacter heparinus DSM 2366  Bacteria  normal  normal 
 
 
-
 
NC_010002  Daci_1277  glucose-1-phosphate thymidylyltransferase  58.54 
 
 
296 aa  362  4e-99  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_010658  SbBS512_E1194  glucose-1-phosphate thymidylyltransferase  58.8 
 
 
292 aa  362  4e-99  Shigella boydii CDC 3083-94  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_0838  glucose-1-phosphate thymidylyltransferase  61.4 
 
 
293 aa  362  4e-99  Marinomonas sp. MWYL1  Bacteria  normal  0.22071  normal 
 
 
-
 
NC_010512  Bcenmc03_6247  glucose-1-phosphate thymidylyltransferase  59.93 
 
 
298 aa  362  5.0000000000000005e-99  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.0385422  normal  0.992107 
 
 
-
 
NC_008544  Bcen2424_6649  glucose-1-phosphate thymidylyltransferase  59.93 
 
 
298 aa  362  6e-99  Burkholderia cenocepacia HI2424  Bacteria  normal  normal 
 
 
-
 
NC_007948  Bpro_4018  glucose-1-phosphate thymidylyltransferase  58.89 
 
 
305 aa  361  7.0000000000000005e-99  Polaromonas sp. JS666  Bacteria  normal  normal  0.520137 
 
 
-
 
NC_008340  Mlg_2319  glucose-1-phosphate thymidylyltransferase  61.27 
 
 
293 aa  361  7.0000000000000005e-99  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  normal  0.103885 
 
 
-
 
CP001637  EcDH1_1618  glucose-1-phosphate thymidylyltransferase  57.64 
 
 
293 aa  361  8e-99  Escherichia coli DH1  Bacteria  normal  0.0952229  n/a   
 
 
-
 
CP001509  ECD_01945  glucose-1-phosphate thymidylyltransferase  58.45 
 
 
292 aa  360  2e-98  Escherichia coli BL21(DE3)  Bacteria  normal  n/a   
 
 
-
 
NC_009800  EcHS_A2181  glucose-1-phosphate thymidylyltransferase  59.57 
 
 
289 aa  360  2e-98  Escherichia coli HS  Bacteria  normal  0.112189  n/a   
 
 
-
 
NC_008532  STER_1224  glucose-1-phosphate thymidyl transferase  59.86 
 
 
289 aa  360  2e-98  Streptococcus thermophilus LMD-9  Bacteria  normal  n/a   
 
 
-
 
NC_007298  Daro_1238  glucose-1-phosphate thymidylyltransferase  59.22 
 
 
296 aa  359  3e-98  Dechloromonas aromatica RCB  Bacteria  normal  normal  0.981269 
 
 
-
 
NC_013132  Cpin_0181  glucose-1-phosphate thymidylyltransferase  59.65 
 
 
289 aa  359  3e-98  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal 
 
 
-
 
NC_007796  Mhun_3075  glucose-1-phosphate thymidylyltransferase  58.62 
 
 
293 aa  359  3e-98  Methanospirillum hungatei JF-1  Archaea  normal  0.589168  normal  0.11788 
 
 
-
 
NC_012791  Vapar_0754  glucose-1-phosphate thymidylyltransferase  60.63 
 
 
299 aa  359  3e-98  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_010501  PputW619_1395  glucose-1-phosphate thymidylyltransferase  58.54 
 
 
296 aa  359  3e-98  Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
NC_004116  SAG1200  glucose-1-phosphate thymidylyltransferase  59.52 
 
 
289 aa  358  4e-98  Streptococcus agalactiae 2603V/R  Bacteria  normal  n/a   
 
 
-
 
NC_012560  Avin_15940  glucose-1-phosphate thymidylyltransferase  59.38 
 
 
293 aa  359  4e-98  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_008391  Bamb_3386  glucose-1-phosphate thymidylyltransferase  59.23 
 
 
298 aa  358  5e-98  Burkholderia ambifaria AMMD  Bacteria  normal  0.718729  normal 
 
 
-
 
NC_013173  Dbac_3118  glucose-1-phosphate thymidylyltransferase  59.52 
 
 
290 aa  358  6e-98  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_007406  Nwi_0545  glucose-1-phosphate thymidylyltransferase, long form  60.84 
 
 
291 aa  358  7e-98  Nitrobacter winogradskyi Nb-255  Bacteria  normal  normal  0.771831 
 
 
-
 
NC_011083  SeHA_C2321  glucose-1-phosphate thymidylyltransferase  57.39 
 
 
294 aa  358  7e-98  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  decreased coverage  0.00736153 
 
 
-
 
NC_009667  Oant_2721  glucose-1-phosphate thymidylyltransferase  60.82 
 
 
293 aa  358  9e-98  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_009665  Shew185_2899  glucose-1-phosphate thymidylyltransferase  58.39 
 
 
287 aa  357  9e-98  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_011149  SeAg_B2220  glucose-1-phosphate thymidylyltransferase  57.04 
 
 
294 aa  357  9.999999999999999e-98  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  0.281714  n/a   
 
 
-
 
NC_013162  Coch_2130  glucose-1-phosphate thymidylyltransferase  58.48 
 
 
293 aa  357  9.999999999999999e-98  Capnocytophaga ochracea DSM 7271  Bacteria  normal  n/a   
 
 
-
 
NC_010468  EcolC_1603  glucose-1-phosphate thymidylyltransferase  57.75 
 
 
292 aa  357  9.999999999999999e-98  Escherichia coli ATCC 8739  Bacteria  normal  0.982513  normal 
 
 
-
 
NC_009712  Mboo_1752  glucose-1-phosphate thymidylyltransferase  59.44 
 
 
297 aa  357  9.999999999999999e-98  Candidatus Methanoregula boonei 6A8  Archaea  normal  normal  0.2486 
 
 
-
 
NC_008781  Pnap_3489  glucose-1-phosphate thymidylyltransferase  58.89 
 
 
295 aa  357  9.999999999999999e-98  Polaromonas naphthalenivorans CJ2  Bacteria  normal  normal  0.374251 
 
 
-
 
NC_011205  SeD_A2435  glucose-1-phosphate thymidylyltransferase  56.69 
 
 
294 aa  356  1.9999999999999998e-97  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  hitchhiker  0.0000704371 
 
 
-
 
NC_008740  Maqu_2629  glucose-1-phosphate thymidylyltransferase  59.51 
 
 
298 aa  357  1.9999999999999998e-97  Marinobacter aquaeolei VT8  Bacteria  normal  0.357597  n/a   
 
 
-
 
NC_011094  SeSA_A2328  glucose-1-phosphate thymidylyltransferase  57.04 
 
 
294 aa  356  2.9999999999999997e-97  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  normal  0.196545 
 
 
-
 
NC_013512  Sdel_1798  glucose-1-phosphate thymidylyltransferase  59.44 
 
 
287 aa  356  2.9999999999999997e-97  Sulfurospirillum deleyianum DSM 6946  Bacteria  normal  n/a   
 
 
-
 
NC_011004  Rpal_0123  glucose-1-phosphate thymidylyltransferase  59.44 
 
 
291 aa  356  2.9999999999999997e-97  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_009801  EcE24377A_2330  glucose-1-phosphate thymidylyltransferase  58.1 
 
 
292 aa  356  2.9999999999999997e-97  Escherichia coli E24377A  Bacteria  normal  0.0550352  n/a   
 
 
-
 
NC_009436  Ent638_2652  glucose-1-phosphate thymidylyltransferase  55.75 
 
 
291 aa  356  2.9999999999999997e-97  Enterobacter sp. 638  Bacteria  normal  normal 
 
 
-
 
NC_011992  Dtpsy_0555  glucose-1-phosphate thymidylyltransferase  59.58 
 
 
296 aa  355  3.9999999999999996e-97  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_011080  SNSL254_A2277  glucose-1-phosphate thymidylyltransferase  57.04 
 
 
294 aa  355  5e-97  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  hitchhiker  0.000000187637 
 
 
-
 
NC_008531  LEUM_1423  glucose-1-phosphate thymidylyltransferase  57.24 
 
 
291 aa  355  5e-97  Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293  Bacteria  normal  n/a   
 
 
-
 
NC_010524  Lcho_0621  glucose-1-phosphate thymidylyltransferase  59.58 
 
 
293 aa  355  5.999999999999999e-97  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.252794 
 
 
-
 
NC_010581  Bind_0210  glucose-1-phosphate thymidylyltransferase  59.52 
 
 
301 aa  355  5.999999999999999e-97  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  0.375545  normal  0.206992 
 
 
-
 
CP001509  ECD_03667  glucose-1-phosphate thymidylyltransferase  59.3 
 
 
293 aa  355  6.999999999999999e-97  Escherichia coli BL21(DE3)  Bacteria  normal  n/a   
 
 
-
 
CP001637  EcDH1_4187  glucose-1-phosphate thymidylyltransferase  59.3 
 
 
293 aa  355  6.999999999999999e-97  Escherichia coli DH1  Bacteria  normal  n/a   
 
 
-
 
NC_012892  B21_03616  hypothetical protein  59.3 
 
 
293 aa  355  6.999999999999999e-97  Escherichia coli BL21  Bacteria  normal  n/a   
 
 
-
 
NC_010468  EcolC_4214  glucose-1-phosphate thymidylyltransferase  59.3 
 
 
293 aa  355  6.999999999999999e-97  Escherichia coli ATCC 8739  Bacteria  normal  normal 
 
 
-
 
NC_010498  EcSMS35_4153  glucose-1-phosphate thymidylyltransferase  59.3 
 
 
293 aa  355  6.999999999999999e-97  Escherichia coli SMS-3-5  Bacteria  normal  normal 
 
 
-
 
NC_009800  EcHS_A4006  glucose-1-phosphate thymidylyltransferase  59.3 
 
 
293 aa  355  6.999999999999999e-97  Escherichia coli HS  Bacteria  normal  n/a   
 
 
-
 
NC_009801  EcE24377A_4300  glucose-1-phosphate thymidylyltransferase  59.3 
 
 
293 aa  355  6.999999999999999e-97  Escherichia coli E24377A  Bacteria  normal  0.671584  n/a   
 
 
-
 
NC_010658  SbBS512_E4132  glucose-1-phosphate thymidylyltransferase  59.3 
 
 
293 aa  355  6.999999999999999e-97  Shigella boydii CDC 3083-94  Bacteria  normal  n/a   
 
 
-
 
NC_008639  Cpha266_1998  glucose-1-phosphate thymidylyltransferase  60.42 
 
 
299 aa  355  6.999999999999999e-97  Chlorobium phaeobacteroides DSM 266  Bacteria  hitchhiker  0.00000687148  n/a   
 
 
-
 
NC_007005  Psyr_0924  glucose-1-phosphate thymidylyltransferase, long form  58.89 
 
 
293 aa  354  8.999999999999999e-97  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal  0.390731 
 
 
-
 
NC_012880  Dd703_3286  glucose-1-phosphate thymidylyltransferase  57.89 
 
 
288 aa  354  8.999999999999999e-97  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_010655  Amuc_0208  glucose-1-phosphate thymidylyltransferase  59.93 
 
 
287 aa  353  1e-96  Akkermansia muciniphila ATCC BAA-835  Bacteria  normal  normal 
 
 
-
 
NC_009720  Xaut_3556  glucose-1-phosphate thymidylyltransferase  59.66 
 
 
294 aa  354  1e-96  Xanthobacter autotrophicus Py2  Bacteria  normal  0.305082  normal  0.867096 
 
 
-
 
NC_010644  Emin_0865  glucose-1-phosphate thymidylyltransferase  58.25 
 
 
294 aa  353  2e-96  Elusimicrobium minutum Pei191  Bacteria  normal  hitchhiker  0.0000000171087 
 
 
-
 
NC_013421  Pecwa_3016  glucose-1-phosphate thymidylyltransferase  56.6 
 
 
289 aa  353  2e-96  Pectobacterium wasabiae WPP163  Bacteria  hitchhiker  0.00414881  n/a   
 
 
-
 
NC_012912  Dd1591_2858  glucose-1-phosphate thymidylyltransferase  58.87 
 
 
289 aa  353  2e-96  Dickeya zeae Ech1591  Bacteria  normal  0.0450568  n/a   
 
 
-
 
NC_007947  Mfla_2009  glucose-1-phosphate thymidylyltransferase  58.19 
 
 
292 aa  353  2e-96  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_008463  PA14_68200  glucose-1-phosphate thymidylyltransferase  59.38 
 
 
293 aa  353  2e-96  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal  0.0399407 
 
 
-
 
NC_008527  LACR_0200  glucose-1-phosphate thymidylyltransferase  59.36 
 
 
289 aa  353  2e-96  Lactococcus lactis subsp. cremoris SK11  Bacteria  normal  0.310491  n/a   
 
 
-
 
NC_008752  Aave_4164  glucose-1-phosphate thymidylyltransferase  60.14 
 
 
291 aa  353  2e-96  Acidovorax citrulli AAC00-1  Bacteria  normal  0.375509  normal  0.0599581 
 
 
-
 
NC_009656  PSPA7_5902  glucose-1-phosphate thymidylyltransferase  59.38 
 
 
293 aa  352  2.9999999999999997e-96  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_007204  Psyc_1214  glucose-1-phosphate thymidylyltransferase  58.54 
 
 
296 aa  353  2.9999999999999997e-96  Psychrobacter arcticus 273-4  Bacteria  normal  0.942362  decreased coverage  0.00289209 
 
 
-
 
NC_008554  Sfum_2263  glucose-1-phosphate thymidylyltransferase  59.03 
 
 
305 aa  352  2.9999999999999997e-96  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_007492  Pfl01_0702  glucose-1-phosphate thymidylyltransferase  60.64 
 
 
307 aa  352  4e-96  Pseudomonas fluorescens Pf0-1  Bacteria  hitchhiker  0.00504967  normal 
 
 
-
 
NC_007908  Rfer_2677  glucose-1-phosphate thymidylyltransferase  58.33 
 
 
292 aa  352  4e-96  Rhodoferax ferrireducens T118  Bacteria  normal  0.475432  n/a   
 
 
-
 
NC_008782  Ajs_0539  glucose-1-phosphate thymidylyltransferase  58.54 
 
 
294 aa  352  5e-96  Acidovorax sp. JS42  Bacteria  normal  0.911631  normal  0.057049 
 
 
-
 
NC_011353  ECH74115_5222  glucose-1-phosphate thymidylyltransferase  58.95 
 
 
293 aa  352  5e-96  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  0.350144  normal 
 
 
-
 
NC_010084  Bmul_2597  glucose-1-phosphate thymidylyltransferase  58.8 
 
 
297 aa  352  5.9999999999999994e-96  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_009441  Fjoh_0331  glucose-1-phosphate thymidylyltransferase  58.66 
 
 
291 aa  351  8e-96  Flavobacterium johnsoniae UW101  Bacteria  normal  0.284071  n/a   
 
 
-
 
NC_011059  Paes_1760  glucose-1-phosphate thymidylyltransferase  58.68 
 
 
298 aa  351  8e-96  Prosthecochloris aestuarii DSM 271  Bacteria  normal  normal  0.0453677 
 
 
-
 
NC_010682  Rpic_0639  glucose-1-phosphate thymidylyltransferase  59.58 
 
 
294 aa  351  8e-96  Ralstonia pickettii 12J  Bacteria  normal  normal  0.477683 
 
 
-
 
NC_008148  Rxyl_3121  glucose-1-phosphate thymidylyltransferase  60.7 
 
 
293 aa  351  8.999999999999999e-96  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_013173  Dbac_2558  glucose-1-phosphate thymidylyltransferase  56.4 
 
 
295 aa  350  1e-95  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_010322  PputGB1_1382  glucose-1-phosphate thymidylyltransferase  59.79 
 
 
293 aa  350  1e-95  Pseudomonas putida GB-1  Bacteria  normal  hitchhiker  0.000585484 
 
 
-
 
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