More than 300 homologs were found in PanDaTox collection
for query gene Sde_3483 on replicon NC_007912
Organism: Saccharophagus degradans 2-40



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007912  Sde_3483  hypothetical protein  100 
 
 
207 aa  425  1e-118  Saccharophagus degradans 2-40  Bacteria  normal  0.129655  normal  0.0813379 
 
 
-
 
NC_007777  Francci3_2094  HAD family hydrolase  36.45 
 
 
226 aa  116  1.9999999999999998e-25  Frankia sp. CcI3  Bacteria  normal  0.07906  normal 
 
 
-
 
NC_008148  Rxyl_2112  HAD family hydrolase  31.86 
 
 
750 aa  98.2  8e-20  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_014210  Ndas_3369  HAD-superfamily subfamily IB hydrolase, TIGR01490  33.85 
 
 
249 aa  92.4  4e-18  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_010557  BamMC406_5696  HAD family hydrolase  29.65 
 
 
231 aa  91.7  6e-18  Burkholderia ambifaria MC40-6  Bacteria  normal  normal  0.0878159 
 
 
-
 
NC_014165  Tbis_0255  HAD-superfamily hydrolase  33.65 
 
 
286 aa  89.7  2e-17  Thermobispora bispora DSM 43833  Bacteria  normal  0.185675  normal 
 
 
-
 
NC_008699  Noca_1998  HAD family hydrolase  31.22 
 
 
799 aa  90.1  2e-17  Nocardioides sp. JS614  Bacteria  normal  0.15184  n/a   
 
 
-
 
NC_013131  Caci_8329  HAD-superfamily subfamily IB hydrolase, TIGR01490  30.14 
 
 
266 aa  88.2  7e-17  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.119426  normal 
 
 
-
 
NC_009921  Franean1_6135  HAD family hydrolase  32.52 
 
 
294 aa  84  0.000000000000001  Frankia sp. EAN1pec  Bacteria  normal  normal  0.415462 
 
 
-
 
NC_008261  CPF_2313  HAD family hydrolase  28.36 
 
 
213 aa  83.2  0.000000000000002  Clostridium perfringens ATCC 13124  Bacteria  normal  n/a   
 
 
-
 
NC_009338  Mflv_0069  HAD family hydrolase  32.38 
 
 
295 aa  82.4  0.000000000000004  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.0248353  normal 
 
 
-
 
NC_007777  Francci3_0481  HAD family hydrolase  31.73 
 
 
295 aa  82.4  0.000000000000004  Frankia sp. CcI3  Bacteria  normal  normal 
 
 
-
 
NC_009380  Strop_0348  HAD family hydrolase  29.85 
 
 
290 aa  82  0.000000000000006  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_013440  Hoch_3628  HAD-superfamily subfamily IB hydrolase, TIGR01490  30.29 
 
 
232 aa  81.6  0.000000000000007  Haliangium ochraceum DSM 14365  Bacteria  normal  0.856585  hitchhiker  0.00143877 
 
 
-
 
NC_009921  Franean1_4170  HAD family hydrolase  31.34 
 
 
787 aa  81.6  0.000000000000008  Frankia sp. EAN1pec  Bacteria  normal  0.243579  normal  0.356217 
 
 
-
 
NC_007777  Francci3_2276  HAD family hydrolase  29.33 
 
 
819 aa  80.5  0.00000000000002  Frankia sp. CcI3  Bacteria  hitchhiker  0.0000198235  hitchhiker  0.000271662 
 
 
-
 
NC_014150  Bmur_0606  HAD-superfamily subfamily IB hydrolase, TIGR01490  30.1 
 
 
219 aa  80.5  0.00000000000002  Brachyspira murdochii DSM 12563  Bacteria  hitchhiker  0.000000630267  n/a   
 
 
-
 
NC_013235  Namu_0916  HAD-superfamily subfamily IB hydrolase, TIGR01490  31.55 
 
 
297 aa  79.3  0.00000000000003  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_014158  Tpau_0665  HAD-superfamily subfamily IB hydrolase, TIGR01490  29.95 
 
 
295 aa  79  0.00000000000004  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.406953  n/a   
 
 
-
 
NC_013757  Gobs_4585  HAD-superfamily subfamily IB hydrolase, TIGR01490  29.95 
 
 
306 aa  79.3  0.00000000000004  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.601592  n/a   
 
 
-
 
NC_013595  Sros_0542  Phosphoserine phosphatase-like protein  31.53 
 
 
289 aa  78.2  0.00000000000009  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.260991 
 
 
-
 
NC_008726  Mvan_0843  HAD family hydrolase  30.92 
 
 
301 aa  76.6  0.0000000000002  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.163877  normal  0.772835 
 
 
-
 
NC_008146  Mmcs_0674  HAD family hydrolase  30.95 
 
 
300 aa  76.6  0.0000000000002  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_009077  Mjls_0667  HAD family hydrolase  30.95 
 
 
300 aa  76.6  0.0000000000002  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_013521  Sked_33380  HAD-superfamily subfamily IB hydrolase, TIGR01490  30 
 
 
265 aa  76.6  0.0000000000002  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.156612  normal 
 
 
-
 
NC_008705  Mkms_0687  HAD family hydrolase  30.95 
 
 
300 aa  76.6  0.0000000000002  Mycobacterium sp. KMS  Bacteria  normal  normal  0.164292 
 
 
-
 
NC_009953  Sare_0418  HAD family hydrolase  27.75 
 
 
312 aa  76.3  0.0000000000003  Salinispora arenicola CNS-205  Bacteria  normal  hitchhiker  0.00884178 
 
 
-
 
NC_013093  Amir_6738  HAD-superfamily subfamily IB hydrolase, TIGR01490  29.06 
 
 
294 aa  76.3  0.0000000000003  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_011886  Achl_3098  HAD-superfamily subfamily IB hydrolase, TIGR01490  28.92 
 
 
272 aa  75.9  0.0000000000004  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_013521  Sked_07130  HAD-superfamily subfamily IB hydrolase, TIGR01490  30.5 
 
 
311 aa  75.5  0.0000000000005  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.371793 
 
 
-
 
NC_014151  Cfla_2740  HAD-superfamily subfamily IB hydrolase, TIGR01490  30 
 
 
288 aa  75.5  0.0000000000005  Cellulomonas flavigena DSM 20109  Bacteria  normal  normal  0.0297875 
 
 
-
 
NC_013530  Xcel_0438  HAD-superfamily subfamily IB hydrolase, TIGR01490  30.39 
 
 
268 aa  75.5  0.0000000000005  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_007333  Tfu_2722  HAD family hydrolase  30.77 
 
 
305 aa  75.1  0.0000000000007  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_013159  Svir_02790  HAD-superfamily subfamily IB hydrolase, TIGR01490  29.56 
 
 
323 aa  74.7  0.0000000000009  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_013159  Svir_35940  HAD-superfamily subfamily IB hydrolase, TIGR01490  28.77 
 
 
280 aa  74.3  0.000000000001  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.330222  normal  0.156171 
 
 
-
 
NC_009675  Anae109_1214  HAD family hydrolase  28.64 
 
 
225 aa  74.7  0.000000000001  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.0597827  normal 
 
 
-
 
NC_009565  TBFG_10516  phosphoserine phosphatase serB1  28.78 
 
 
373 aa  74.3  0.000000000001  Mycobacterium tuberculosis F11  Bacteria  normal  normal 
 
 
-
 
NC_013441  Gbro_1010  HAD-superfamily subfamily IB hydrolase, TIGR01490  29.47 
 
 
352 aa  74.7  0.000000000001  Gordonia bronchialis DSM 43247  Bacteria  normal  0.784708  n/a   
 
 
-
 
NC_010501  PputW619_0318  HAD family hydrolase  26.96 
 
 
218 aa  74.3  0.000000000001  Pseudomonas putida W619  Bacteria  normal  normal  0.13474 
 
 
-
 
NC_009380  Strop_4041  HAD family hydrolase  26.96 
 
 
267 aa  73.6  0.000000000002  Salinispora tropica CNB-440  Bacteria  normal  0.946878  normal 
 
 
-
 
NC_008541  Arth_3299  HAD family hydrolase  27.59 
 
 
272 aa  73.9  0.000000000002  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_008699  Noca_0490  HAD family hydrolase  30.88 
 
 
297 aa  73.6  0.000000000002  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_011901  Tgr7_2416  HAD-superfamily subfamily IB hydrolase, TIGR01490  27.78 
 
 
219 aa  73.2  0.000000000003  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_4844  HAD family hydrolase  26.34 
 
 
218 aa  73.2  0.000000000003  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_009953  Sare_4432  HAD family hydrolase  26.96 
 
 
270 aa  73.2  0.000000000003  Salinispora arenicola CNS-205  Bacteria  normal  hitchhiker  0.000343409 
 
 
-
 
NC_007947  Mfla_0520  HAD family hydrolase  34.58 
 
 
220 aa  73.2  0.000000000003  Methylobacillus flagellatus KT  Bacteria  normal  0.0927887  normal 
 
 
-
 
NC_013440  Hoch_6034  HAD-superfamily subfamily IB hydrolase, TIGR01490  28.92 
 
 
222 aa  71.6  0.000000000008  Haliangium ochraceum DSM 14365  Bacteria  normal  normal 
 
 
-
 
NC_007760  Adeh_1167  HAD family hydrolase  27.8 
 
 
225 aa  71.2  0.00000000001  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_5286  HAD-superfamily hydrolase  25.6 
 
 
218 aa  70.5  0.00000000002  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_013521  Sked_19450  phosphoserine phosphatase  25.24 
 
 
778 aa  70.1  0.00000000002  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_013441  Gbro_4653  HAD-superfamily subfamily IB hydrolase, TIGR01490  29.33 
 
 
493 aa  69.7  0.00000000003  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_011145  AnaeK_1226  HAD-superfamily subfamily IB hydrolase, TIGR01490  27.32 
 
 
225 aa  69.7  0.00000000003  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_013124  Afer_1925  HAD-superfamily subfamily IB hydrolase, TIGR01490  29.56 
 
 
273 aa  69.7  0.00000000003  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  n/a   
 
 
-
 
NC_011891  A2cp1_1328  HAD-superfamily subfamily IB hydrolase, TIGR01490  27.45 
 
 
225 aa  69.7  0.00000000003  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_013172  Bfae_27140  HAD-superfamily subfamily IB hydrolase, TIGR01490  26.57 
 
 
768 aa  69.7  0.00000000003  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_008262  CPR_1188  haloacid dehalogenase, IB family protein  29.47 
 
 
244 aa  68.9  0.00000000005  Clostridium perfringens SM101  Bacteria  hitchhiker  0.00503325  n/a   
 
 
-
 
NC_008740  Maqu_0813  HAD family hydrolase  23.41 
 
 
228 aa  68.9  0.00000000005  Marinobacter aquaeolei VT8  Bacteria  decreased coverage  0.00498763  n/a   
 
 
-
 
NC_007912  Sde_0346  XRE family transcriptional regulator  31.43 
 
 
218 aa  68.6  0.00000000006  Saccharophagus degradans 2-40  Bacteria  normal  0.923957  normal  0.0904875 
 
 
-
 
NC_013757  Gobs_0590  HAD-superfamily subfamily IB hydrolase, TIGR01490  28.99 
 
 
280 aa  68.6  0.00000000007  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.841556  n/a   
 
 
-
 
NC_008261  CPF_1375  haloacid dehalogenase, IB family protein  28.64 
 
 
244 aa  68.6  0.00000000007  Clostridium perfringens ATCC 13124  Bacteria  hitchhiker  0.0035145  n/a   
 
 
-
 
NC_013093  Amir_0274  HAD-superfamily subfamily IB hydrolase, TIGR01490  26.5 
 
 
270 aa  68.6  0.00000000007  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013165  Shel_12860  HAD-superfamily subfamily IB hydrolase, TIGR01490  29.47 
 
 
233 aa  68.2  0.00000000009  Slackia heliotrinireducens DSM 20476  Bacteria  normal  0.0281228  normal 
 
 
-
 
NC_002947  PP_5147  HAD superfamily hydrolase  24.88 
 
 
218 aa  67.4  0.0000000001  Pseudomonas putida KT2440  Bacteria  normal  normal  0.416091 
 
 
-
 
NC_009512  Pput_5054  HAD family hydrolase  24.88 
 
 
218 aa  67.8  0.0000000001  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_007963  Csal_2578  HAD family hydrolase  31.37 
 
 
218 aa  67.4  0.0000000001  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_009664  Krad_0614  HAD-superfamily subfamily IB hydrolase, TIGR01490  25.84 
 
 
255 aa  67.4  0.0000000001  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.160629  normal  0.0475682 
 
 
-
 
NC_010322  PputGB1_5200  HAD family hydrolase  24.63 
 
 
218 aa  67  0.0000000002  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_009656  PSPA7_1870  hypothetical protein  29.1 
 
 
216 aa  66.6  0.0000000002  Pseudomonas aeruginosa PA7  Bacteria  normal  0.531495  n/a   
 
 
-
 
NC_011899  Hore_11300  phosphoserine phosphatase  26.42 
 
 
225 aa  67  0.0000000002  Halothermothrix orenii H 168  Bacteria  hitchhiker  0.00000517664  n/a   
 
 
-
 
NC_013510  Tcur_4446  HAD-superfamily subfamily IB hydrolase, TIGR01490  27.86 
 
 
290 aa  66.6  0.0000000002  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_014158  Tpau_3910  HAD-superfamily subfamily IB hydrolase  27.59 
 
 
284 aa  66.2  0.0000000003  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_3259  HAD-superfamily subfamily IB hydrolase, TIGR01490  28.86 
 
 
263 aa  66.6  0.0000000003  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.107889  normal  0.303521 
 
 
-
 
NC_013947  Snas_6363  HAD-superfamily subfamily IB hydrolase TIGR01490  30.29 
 
 
272 aa  65.9  0.0000000005  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.499829  normal 
 
 
-
 
NC_007484  Noc_2017  HAD family hydrolase  25.98 
 
 
242 aa  65.5  0.0000000005  Nitrosococcus oceani ATCC 19707  Bacteria  normal  n/a   
 
 
-
 
NC_008146  Mmcs_3619  1-acyl-sn-glycerol-3-phosphate acyltransferase  26.34 
 
 
561 aa  65.1  0.0000000006  Mycobacterium sp. MCS  Bacteria  hitchhiker  0.00474083  n/a   
 
 
-
 
NC_008705  Mkms_3692  1-acyl-sn-glycerol-3-phosphate acyltransferase  26.34 
 
 
561 aa  65.1  0.0000000006  Mycobacterium sp. KMS  Bacteria  decreased coverage  0.000184882  normal 
 
 
-
 
NC_009077  Mjls_3624  1-acyl-sn-glycerol-3-phosphate acyltransferase  26.34 
 
 
561 aa  65.1  0.0000000007  Mycobacterium sp. JLS  Bacteria  normal  0.329409  normal 
 
 
-
 
NC_008576  Mmc1_2929  HAD family hydrolase  30.56 
 
 
221 aa  65.1  0.0000000007  Magnetococcus sp. MC-1  Bacteria  hitchhiker  0.0000000550566  normal 
 
 
-
 
NC_002950  PG0508  HAD family hydrolase  26.15 
 
 
200 aa  64.7  0.0000000008  Porphyromonas gingivalis W83  Bacteria  n/a    normal  0.210077 
 
 
-
 
NC_002977  MCA2087  HAD family hydrolase  28.8 
 
 
220 aa  64.3  0.000000001  Methylococcus capsulatus str. Bath  Bacteria  hitchhiker  0.00266008  n/a   
 
 
-
 
NC_013947  Snas_6219  HAD-superfamily subfamily IB hydrolase TIGR01490  28.5 
 
 
289 aa  64.3  0.000000001  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_009656  PSPA7_0428  hypothetical protein  25.98 
 
 
217 aa  63.5  0.000000002  Pseudomonas aeruginosa PA7  Bacteria  normal  0.469146  n/a   
 
 
-
 
NC_013235  Namu_5002  HAD-superfamily subfamily IB hydrolase, TIGR01490  27.14 
 
 
488 aa  63.9  0.000000002  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_014151  Cfla_2800  HAD-superfamily subfamily IB hydrolase, TIGR01490  27.78 
 
 
275 aa  63.9  0.000000002  Cellulomonas flavigena DSM 20109  Bacteria  normal  hitchhiker  0.00283353 
 
 
-
 
NC_014210  Ndas_4355  HAD-superfamily subfamily IB hydrolase, TIGR01490  28.29 
 
 
262 aa  63.2  0.000000003  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.571582 
 
 
-
 
NC_013530  Xcel_0320  HAD-superfamily subfamily IB hydrolase, TIGR01490  28.5 
 
 
258 aa  62.8  0.000000003  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.369561  n/a   
 
 
-
 
NC_009664  Krad_4168  Male sterility domain  26.34 
 
 
764 aa  63.2  0.000000003  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_008789  Hhal_0886  HAD family hydrolase  23.5 
 
 
227 aa  62.8  0.000000004  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_4644  HAD-superfamily subfamily IB hydrolase, TIGR01490  26.92 
 
 
286 aa  62.4  0.000000004  Conexibacter woesei DSM 14684  Bacteria  normal  normal  0.460145 
 
 
-
 
NC_008261  CPF_0237  HAD family hydrolase  30 
 
 
211 aa  62.4  0.000000005  Clostridium perfringens ATCC 13124  Bacteria  hitchhiker  0.00000336173  n/a   
 
 
-
 
NC_008463  PA14_21900  HAD-superfamily hydrolase  30.56 
 
 
192 aa  62.4  0.000000005  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  hitchhiker  0.00000205565 
 
 
-
 
NC_007404  Tbd_2011  phosphoserine phosphatase  30.48 
 
 
222 aa  62  0.000000006  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.291449  normal 
 
 
-
 
NC_007492  Pfl01_5379  HAD family hydrolase  24.39 
 
 
218 aa  61.6  0.000000007  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.396939  normal  0.0228377 
 
 
-
 
NC_013131  Caci_0054  HAD-superfamily subfamily IB hydrolase, TIGR01490  28.5 
 
 
281 aa  61.6  0.000000007  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_007520  Tcr_0999  HAD family hydrolase  23.38 
 
 
218 aa  61.2  0.00000001  Thiomicrospira crunogena XCL-2  Bacteria  normal  0.0230421  n/a   
 
 
-
 
NC_013441  Gbro_0515  HAD-superfamily subfamily IB hydrolase, TIGR01490  25.5 
 
 
289 aa  61.2  0.00000001  Gordonia bronchialis DSM 43247  Bacteria  normal  0.589704  n/a   
 
 
-
 
NC_013235  Namu_1688  phosphoserine phosphatase SerB  34.95 
 
 
380 aa  60.5  0.00000002  Nakamurella multipartita DSM 44233  Bacteria  normal  normal  0.0594827 
 
 
-
 
NC_008726  Mvan_4075  HAD family hydrolase  27.18 
 
 
525 aa  60.5  0.00000002  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal  0.588653 
 
 
-
 
NC_013422  Hneap_0991  HAD-superfamily subfamily IB hydrolase, TIGR01490  23.67 
 
 
218 aa  59.3  0.00000003  Halothiobacillus neapolitanus c2  Bacteria  normal  n/a   
 
 
-
 
NC_011205  SeD_A4990  phosphoserine phosphatase  33.67 
 
 
322 aa  59.7  0.00000003  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  normal 
 
 
-
 
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