245 homologs were found in PanDaTox collection
for query gene Sked_19450 on replicon NC_013521
Organism: Sanguibacter keddieii DSM 10542



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013172  Bfae_27140  HAD-superfamily subfamily IB hydrolase, TIGR01490  52.55 
 
 
768 aa  766    Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_013521  Sked_19450  phosphoserine phosphatase  100 
 
 
778 aa  1557    Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_007777  Francci3_2276  HAD family hydrolase  47.27 
 
 
819 aa  585  1.0000000000000001e-165  Frankia sp. CcI3  Bacteria  hitchhiker  0.0000198235  hitchhiker  0.000271662 
 
 
-
 
NC_009921  Franean1_4170  HAD family hydrolase  47.5 
 
 
787 aa  566  1e-160  Frankia sp. EAN1pec  Bacteria  normal  0.243579  normal  0.356217 
 
 
-
 
NC_009664  Krad_4168  Male sterility domain  43.32 
 
 
764 aa  547  1e-154  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_008699  Noca_1998  HAD family hydrolase  42.71 
 
 
799 aa  537  1e-151  Nocardioides sp. JS614  Bacteria  normal  0.15184  n/a   
 
 
-
 
NC_008148  Rxyl_2112  HAD family hydrolase  39.65 
 
 
750 aa  441  9.999999999999999e-123  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_013124  Afer_1432  HAD-superfamily subfamily IB hydrolase, TIGR01490  39.5 
 
 
770 aa  435  1e-120  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  0.438652  n/a   
 
 
-
 
NC_008740  Maqu_2220  hypothetical protein  28.29 
 
 
513 aa  157  8e-37  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_011891  A2cp1_1326  AMP-dependent synthetase and ligase  33.08 
 
 
1538 aa  151  4e-35  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  0.683911  n/a   
 
 
-
 
NC_013440  Hoch_3248  AMP-dependent synthetase and ligase  27.13 
 
 
1542 aa  148  3e-34  Haliangium ochraceum DSM 14365  Bacteria  normal  normal  0.151013 
 
 
-
 
NC_011145  AnaeK_1224  AMP-dependent synthetase and ligase  33.17 
 
 
1538 aa  148  4.0000000000000006e-34  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_007760  Adeh_1165  long-chain-fatty-acid CoA ligase  32.51 
 
 
1537 aa  145  2e-33  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_009675  Anae109_1212  AMP-dependent synthetase and ligase  28.47 
 
 
1557 aa  139  3.0000000000000003e-31  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.97717  normal 
 
 
-
 
NC_013440  Hoch_3628  HAD-superfamily subfamily IB hydrolase, TIGR01490  31.94 
 
 
232 aa  115  4.0000000000000004e-24  Haliangium ochraceum DSM 14365  Bacteria  normal  0.856585  hitchhiker  0.00143877 
 
 
-
 
NC_009675  Anae109_1214  HAD family hydrolase  33.64 
 
 
225 aa  101  7e-20  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.0597827  normal 
 
 
-
 
NC_011891  A2cp1_1328  HAD-superfamily subfamily IB hydrolase, TIGR01490  32.24 
 
 
225 aa  94.7  5e-18  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_011145  AnaeK_1226  HAD-superfamily subfamily IB hydrolase, TIGR01490  32.24 
 
 
225 aa  94.7  6e-18  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_007760  Adeh_1167  HAD family hydrolase  31.31 
 
 
225 aa  93.6  1e-17  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_007484  Noc_2017  HAD family hydrolase  27.46 
 
 
242 aa  90.1  2e-16  Nitrosococcus oceani ATCC 19707  Bacteria  normal  n/a   
 
 
-
 
NC_013441  Gbro_4653  HAD-superfamily subfamily IB hydrolase, TIGR01490  26.72 
 
 
493 aa  83.2  0.00000000000002  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_007492  Pfl01_5379  HAD family hydrolase  27.4 
 
 
218 aa  81.6  0.00000000000005  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.396939  normal  0.0228377 
 
 
-
 
NC_002977  MCA2087  HAD family hydrolase  29.33 
 
 
220 aa  79.7  0.0000000000002  Methylococcus capsulatus str. Bath  Bacteria  hitchhiker  0.00266008  n/a   
 
 
-
 
NC_013521  Sked_07130  HAD-superfamily subfamily IB hydrolase, TIGR01490  28.1 
 
 
311 aa  79.7  0.0000000000002  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.371793 
 
 
-
 
NC_004578  PSPTO_5286  HAD-superfamily hydrolase  28.31 
 
 
218 aa  79.3  0.0000000000003  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_4844  HAD family hydrolase  26.82 
 
 
218 aa  79.3  0.0000000000003  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_013159  Svir_35940  HAD-superfamily subfamily IB hydrolase, TIGR01490  30.34 
 
 
280 aa  78.6  0.0000000000004  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.330222  normal  0.156171 
 
 
-
 
NC_014151  Cfla_2740  HAD-superfamily subfamily IB hydrolase, TIGR01490  30.13 
 
 
288 aa  78.2  0.0000000000006  Cellulomonas flavigena DSM 20109  Bacteria  normal  normal  0.0297875 
 
 
-
 
NC_013521  Sked_33380  HAD-superfamily subfamily IB hydrolase, TIGR01490  39.37 
 
 
265 aa  77.8  0.0000000000007  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.156612  normal 
 
 
-
 
NC_013739  Cwoe_4644  HAD-superfamily subfamily IB hydrolase, TIGR01490  37.31 
 
 
286 aa  77  0.000000000001  Conexibacter woesei DSM 14684  Bacteria  normal  normal  0.460145 
 
 
-
 
NC_013889  TK90_0395  HAD-superfamily subfamily IB hydrolase, TIGR01490  28.57 
 
 
228 aa  77.4  0.000000000001  Thioalkalivibrio sp. K90mix  Bacteria  normal  0.771269  normal  0.534217 
 
 
-
 
NC_009380  Strop_4041  HAD family hydrolase  33.33 
 
 
267 aa  76.6  0.000000000002  Salinispora tropica CNB-440  Bacteria  normal  0.946878  normal 
 
 
-
 
NC_008699  Noca_0362  HAD family hydrolase  31.87 
 
 
289 aa  75.9  0.000000000002  Nocardioides sp. JS614  Bacteria  hitchhiker  0.00108694  n/a   
 
 
-
 
NC_013595  Sros_0542  Phosphoserine phosphatase-like protein  33.48 
 
 
289 aa  76.6  0.000000000002  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.260991 
 
 
-
 
NC_014151  Cfla_2800  HAD-superfamily subfamily IB hydrolase, TIGR01490  32.69 
 
 
275 aa  75.5  0.000000000003  Cellulomonas flavigena DSM 20109  Bacteria  normal  hitchhiker  0.00283353 
 
 
-
 
NC_010501  PputW619_0318  HAD family hydrolase  35.94 
 
 
218 aa  75.9  0.000000000003  Pseudomonas putida W619  Bacteria  normal  normal  0.13474 
 
 
-
 
NC_009656  PSPA7_0428  hypothetical protein  34.71 
 
 
217 aa  75.9  0.000000000003  Pseudomonas aeruginosa PA7  Bacteria  normal  0.469146  n/a   
 
 
-
 
NC_014165  Tbis_0255  HAD-superfamily hydrolase  30.32 
 
 
286 aa  75.5  0.000000000004  Thermobispora bispora DSM 43833  Bacteria  normal  0.185675  normal 
 
 
-
 
NC_013131  Caci_8329  HAD-superfamily subfamily IB hydrolase, TIGR01490  36.42 
 
 
266 aa  75.1  0.000000000004  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.119426  normal 
 
 
-
 
NC_013440  Hoch_6034  HAD-superfamily subfamily IB hydrolase, TIGR01490  36.29 
 
 
222 aa  75.1  0.000000000005  Haliangium ochraceum DSM 14365  Bacteria  normal  normal 
 
 
-
 
NC_013757  Gobs_0590  HAD-superfamily subfamily IB hydrolase, TIGR01490  33.33 
 
 
280 aa  75.1  0.000000000005  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.841556  n/a   
 
 
-
 
NC_008740  Maqu_0813  HAD family hydrolase  26.75 
 
 
228 aa  74.7  0.000000000005  Marinobacter aquaeolei VT8  Bacteria  decreased coverage  0.00498763  n/a   
 
 
-
 
NC_013530  Xcel_0438  HAD-superfamily subfamily IB hydrolase, TIGR01490  30.04 
 
 
268 aa  74.7  0.000000000006  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_009338  Mflv_2564  HAD family hydrolase  24.37 
 
 
570 aa  74.7  0.000000000006  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.341145  normal  0.242767 
 
 
-
 
NC_013124  Afer_1925  HAD-superfamily subfamily IB hydrolase, TIGR01490  30.77 
 
 
273 aa  74.3  0.000000000007  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  n/a   
 
 
-
 
NC_008146  Mmcs_3619  1-acyl-sn-glycerol-3-phosphate acyltransferase  26.67 
 
 
561 aa  74.3  0.000000000007  Mycobacterium sp. MCS  Bacteria  hitchhiker  0.00474083  n/a   
 
 
-
 
NC_008705  Mkms_3692  1-acyl-sn-glycerol-3-phosphate acyltransferase  26.67 
 
 
561 aa  74.3  0.000000000007  Mycobacterium sp. KMS  Bacteria  decreased coverage  0.000184882  normal 
 
 
-
 
NC_009077  Mjls_3624  1-acyl-sn-glycerol-3-phosphate acyltransferase  26.67 
 
 
561 aa  74.7  0.000000000007  Mycobacterium sp. JLS  Bacteria  normal  0.329409  normal 
 
 
-
 
NC_009565  TBFG_12504  bifunctionnal transmembrane phospholipid biosynthesis enzyme plsC: L-3-phosphoserine phosphatase + 1-acyl-sn-glycerol-3-phosphate acyltransferase  25.33 
 
 
580 aa  73.6  0.00000000001  Mycobacterium tuberculosis F11  Bacteria  normal  0.088131  normal 
 
 
-
 
NC_011901  Tgr7_2416  HAD-superfamily subfamily IB hydrolase, TIGR01490  26.27 
 
 
219 aa  73.9  0.00000000001  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_008726  Mvan_4075  HAD family hydrolase  24.89 
 
 
525 aa  73.9  0.00000000001  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal  0.588653 
 
 
-
 
NC_013947  Snas_6363  HAD-superfamily subfamily IB hydrolase TIGR01490  28.46 
 
 
272 aa  73.2  0.00000000002  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.499829  normal 
 
 
-
 
NC_010322  PputGB1_5200  HAD family hydrolase  35.94 
 
 
218 aa  73.2  0.00000000002  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_008576  Mmc1_2929  HAD family hydrolase  25.23 
 
 
221 aa  73.2  0.00000000002  Magnetococcus sp. MC-1  Bacteria  hitchhiker  0.0000000550566  normal 
 
 
-
 
NC_013174  Jden_2226  HAD-superfamily subfamily IB hydrolase, TIGR01490  36.22 
 
 
282 aa  73.6  0.00000000002  Jonesia denitrificans DSM 20603  Bacteria  normal  normal  0.98055 
 
 
-
 
NC_007333  Tfu_2722  HAD family hydrolase  32.48 
 
 
305 aa  72.4  0.00000000003  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_04380  hypothetical protein  33.06 
 
 
217 aa  72.4  0.00000000003  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_008541  Arth_3299  HAD family hydrolase  29.69 
 
 
272 aa  72.4  0.00000000003  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_009953  Sare_4432  HAD family hydrolase  32.05 
 
 
270 aa  72  0.00000000004  Salinispora arenicola CNS-205  Bacteria  normal  hitchhiker  0.000343409 
 
 
-
 
NC_013093  Amir_0274  HAD-superfamily subfamily IB hydrolase, TIGR01490  33.09 
 
 
270 aa  72  0.00000000004  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013235  Namu_5002  HAD-superfamily subfamily IB hydrolase, TIGR01490  32.09 
 
 
488 aa  71.6  0.00000000005  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_007777  Francci3_0481  HAD family hydrolase  29.8 
 
 
295 aa  71.6  0.00000000005  Frankia sp. CcI3  Bacteria  normal  normal 
 
 
-
 
NC_009524  PsycPRwf_0837  HAD family hydrolase  26.2 
 
 
231 aa  71.6  0.00000000006  Psychrobacter sp. PRwf-1  Bacteria  normal  normal  0.883121 
 
 
-
 
NC_009921  Franean1_6135  HAD family hydrolase  38.17 
 
 
294 aa  70.9  0.00000000009  Frankia sp. EAN1pec  Bacteria  normal  normal  0.415462 
 
 
-
 
NC_011886  Achl_3098  HAD-superfamily subfamily IB hydrolase, TIGR01490  35.82 
 
 
272 aa  70.5  0.0000000001  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_002947  PP_5147  HAD superfamily hydrolase  35.16 
 
 
218 aa  69.7  0.0000000002  Pseudomonas putida KT2440  Bacteria  normal  normal  0.416091 
 
 
-
 
NC_007912  Sde_0346  XRE family transcriptional regulator  29.13 
 
 
218 aa  70.1  0.0000000002  Saccharophagus degradans 2-40  Bacteria  normal  0.923957  normal  0.0904875 
 
 
-
 
NC_007912  Sde_3483  hypothetical protein  25.24 
 
 
207 aa  70.1  0.0000000002  Saccharophagus degradans 2-40  Bacteria  normal  0.129655  normal  0.0813379 
 
 
-
 
NC_013530  Xcel_0320  HAD-superfamily subfamily IB hydrolase, TIGR01490  33.57 
 
 
258 aa  69.3  0.0000000002  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.369561  n/a   
 
 
-
 
NC_009512  Pput_5054  HAD family hydrolase  34.88 
 
 
218 aa  69.7  0.0000000002  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_008346  Swol_2080  phosphoserine phosphatase-like protein  27.4 
 
 
221 aa  69.7  0.0000000002  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  0.642708  n/a   
 
 
-
 
NC_011145  AnaeK_2544  HAD-superfamily subfamily IB hydrolase, TIGR01490  22.69 
 
 
241 aa  69.3  0.0000000002  Anaeromyxobacter sp. K  Bacteria  decreased coverage  0.00145664  n/a   
 
 
-
 
NC_011891  A2cp1_2640  HAD-superfamily subfamily IB hydrolase, TIGR01490  22.69 
 
 
241 aa  69.3  0.0000000003  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  0.228843  n/a   
 
 
-
 
NC_014158  Tpau_3910  HAD-superfamily subfamily IB hydrolase  27.46 
 
 
284 aa  69.3  0.0000000003  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_007760  Adeh_1316  HAD family hydrolase  22.69 
 
 
241 aa  68.9  0.0000000003  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.021557  n/a   
 
 
-
 
NC_007951  Bxe_A3954  HAD family hydrolase  27.31 
 
 
228 aa  68.9  0.0000000003  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.0220849 
 
 
-
 
NC_010622  Bphy_2490  HAD family hydrolase  32.37 
 
 
228 aa  68.2  0.0000000005  Burkholderia phymatum STM815  Bacteria  normal  normal  0.393603 
 
 
-
 
NC_007651  BTH_I1315  HAD family hydrolase  26.55 
 
 
228 aa  67.8  0.0000000007  Burkholderia thailandensis E264  Bacteria  normal  0.171844  n/a   
 
 
-
 
NC_009656  PSPA7_1870  hypothetical protein  31.79 
 
 
216 aa  67.4  0.0000000009  Pseudomonas aeruginosa PA7  Bacteria  normal  0.531495  n/a   
 
 
-
 
NC_006348  BMA2319  HAD family hydrolase  26.55 
 
 
228 aa  67.4  0.000000001  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_007204  Psyc_0818  hypothetical protein  24.24 
 
 
238 aa  66.6  0.000000001  Psychrobacter arcticus 273-4  Bacteria  normal  normal  0.0281018 
 
 
-
 
NC_007434  BURPS1710b_3313  HAD family hydrolase  26.55 
 
 
228 aa  67.4  0.000000001  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_007510  Bcep18194_A3846  HAD family hydrolase  28.25 
 
 
225 aa  67.4  0.000000001  Burkholderia sp. 383  Bacteria  normal  0.500335  normal 
 
 
-
 
NC_007969  Pcryo_0833  HAD family hydrolase  24.56 
 
 
235 aa  67  0.000000001  Psychrobacter cryohalolentis K5  Bacteria  normal  normal 
 
 
-
 
NC_010681  Bphyt_0745  HAD-superfamily subfamily IB hydrolase, TIGR01490  26.11 
 
 
228 aa  67  0.000000001  Burkholderia phytofirmans PsJN  Bacteria  decreased coverage  0.00362986  normal  0.517571 
 
 
-
 
NC_008785  BMASAVP1_A0508  HAD-superfamily subfamily IB hydrolase  26.55 
 
 
228 aa  67.4  0.000000001  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_009439  Pmen_4219  HAD family hydrolase  24.66 
 
 
217 aa  67  0.000000001  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_008836  BMA10229_A1091  HAD-superfamily subfamily IB hydrolase  26.55 
 
 
228 aa  67.4  0.000000001  Burkholderia mallei NCTC 10229  Bacteria  normal  0.494878  n/a   
 
 
-
 
NC_009074  BURPS668_3270  HAD-superfamily subfamily IB hydrolase  26.55 
 
 
228 aa  67.4  0.000000001  Burkholderia pseudomallei 668  Bacteria  normal  0.487374  n/a   
 
 
-
 
NC_009076  BURPS1106A_3303  HAD-superfamily subfamily IB hydrolase  26.55 
 
 
228 aa  67.4  0.000000001  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_009080  BMA10247_2198  HAD-superfamily subfamily IB hydrolase  26.55 
 
 
228 aa  67.4  0.000000001  Burkholderia mallei NCTC 10247  Bacteria  normal  0.409073  n/a   
 
 
-
 
NC_009365  OSTLU_26514  predicted protein  27.83 
 
 
262 aa  66.2  0.000000002  Ostreococcus lucimarinus CCE9901  Eukaryota  normal  0.0100496  normal  0.0236046 
 
 
-
 
NC_008048  Sala_0193  HAD family hydrolase  23.93 
 
 
518 aa  65.5  0.000000003  Sphingopyxis alaskensis RB2256  Bacteria  normal  0.0459706  normal 
 
 
-
 
NC_013757  Gobs_4585  HAD-superfamily subfamily IB hydrolase, TIGR01490  37.59 
 
 
306 aa  65.9  0.000000003  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.601592  n/a   
 
 
-
 
NC_012560  Avin_48250  HAD-superfamily hydrolase subfamily IB, PSPase-like protein  31.25 
 
 
217 aa  65.5  0.000000004  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_008146  Mmcs_4807  HAD family hydrolase  26.72 
 
 
285 aa  65.5  0.000000004  Mycobacterium sp. MCS  Bacteria  normal  0.0376166  n/a   
 
 
-
 
NC_008705  Mkms_4893  HAD family hydrolase  26.72 
 
 
285 aa  65.5  0.000000004  Mycobacterium sp. KMS  Bacteria  normal  normal  0.271167 
 
 
-
 
NC_009077  Mjls_5194  HAD family hydrolase  26.72 
 
 
285 aa  65.5  0.000000004  Mycobacterium sp. JLS  Bacteria  normal  0.421915  hitchhiker  0.000238579 
 
 
-
 
NC_010551  BamMC406_0678  HAD family hydrolase  28.25 
 
 
225 aa  65.1  0.000000005  Burkholderia ambifaria MC40-6  Bacteria  normal  0.161467  normal 
 
 
-
 
NC_008463  PA14_49620  phosphoserine phosphatase  27.31 
 
 
217 aa  65.1  0.000000005  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  hitchhiker  0.00503624  normal 
 
 
-
 
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